RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 WDR48Q8TAF3 677 aa13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 ACTL9Q8TC94 416 aa13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 COX14Q96I36 57 aa13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 ZMYND15Q9H091 742 aa13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 FAM153AQ9UHL3 310 aa13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 RSPH14Q9UHP6 348 aa13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 CNOT6Q9ULM6 557 aaKnown RBP13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 KCNK6Q9Y257 313 aa13.52□□□□□ -0.25
VPS9D1-204ENST00000565023 CELSR3Q9NYQ7 3312 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 CCDC187A0A096LP49 1063 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 D6RAR5 112 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 AURKAO14965 403 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 ZSCAN12O43309 604 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 MTSS1O43312 755 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 BUD23O43709 281 aaKnown RBP13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 SNX2O60749 519 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 TJP3O95049 919 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 ACP5P13686 325 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 HGFP14210 728 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 LSSP48449 732 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 INHBCP55103 352 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 XRCC4Q13426 336 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 PLA2G4EQ3MJ16 856 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 PHF19Q5T6S3 580 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 CRTC3Q6UUV7 619 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 KDELC1Q6UW63 502 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 USP53Q70EK8 1073 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 SPRED1Q7Z699 444 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 PDZD3Q86UT5 571 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 NLRP8Q86W28 1048 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 JAMLQ86YT9 394 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 NAGSQ8N159 534 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 WDR36Q8NI36 951 aaKnown RBP13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 BLOC1S5Q8TDH9 187 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 TADA1Q96BN2 335 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 OXNAD1Q96HP4 312 aaPredicted RBP13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 RDH14Q9HBH5 336 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 MAGEE1Q9HCI5 957 aa13.51□□□□□ -0.25
VPS9D1-204ENST00000565023 A0A087WV48 116 aa13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 HACD1B0YJ81 288 aa13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 DNAJC6O75061 913 aa13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 MTX2O75431 263 aa13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 TNFSF15O95150 251 aa13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 SLC25A14O95258 325 aaPredicted RBP13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 BPIP17213 487 aa13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 PCBP4P57723 403 aaKnown RBP13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 EIF3EP60228 445 aaKnown RBP13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 KLF1Q13351 362 aaPredicted RBP13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 RPS6KA1Q15418 735 aa13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 SIRPB2Q5JXA9 342 aa13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 DARS2Q6PI48 645 aaKnown RBP13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 TMC3Q7Z5M5 1100 aa13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 LSMEM2Q8N112 164 aa13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 FBXO39Q8N4B4 442 aa13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 SNIP1Q8TAD8 396 aaKnown RBP13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 MRGPRX2Q96LB1 330 aa13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 ZNF578Q96N58 590 aaPredicted RBP13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 FCRL5Q96RD9 977 aa13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 APOL2Q9BQE5 337 aa13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 FICDQ9BVA6 458 aa13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 STRADBQ9C0K7 418 aa13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 OR2AG1Q9H205 316 aa13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 CARD9Q9H257 536 aa13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 ATXN10Q9UBB4 475 aa13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 PISDQ9UG56 409 aa13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 APPL1Q9UKG1 709 aa13.5□□□□□ -0.25
VPS9D1-204ENST00000565023 RGSL1A5PLK6 1076 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 PPM1DO15297 605 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 KCNN4O15554 427 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 GRID2O43424 1007 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 B4GAT1O43505 415 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 NUDT21O43809 227 aaKnown RBP13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 EML2O95834 649 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 RBP3P10745 1247 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 ZNF8P17098 575 aaPredicted RBP13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 B4GALNT1Q00973 533 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 OLIG2Q13516 323 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 SLC14A2Q15849 920 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 NKAIN2Q5VXU1 208 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 RAB11FIP2Q7L804 512 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 TMPRSS9Q7Z410 1059 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 CDKL3Q8IVW4 592 aaPredicted RBP13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 TRAM1L1Q8N609 369 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 ZNF248Q8NDW4 579 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 GDAP1Q8TB36 358 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 SLC37A2Q8TED4 501 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 SCARF2Q96GP6 870 aaPredicted RBP13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 TMEM74Q96NL1 305 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 VAT1Q99536 393 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 NUDT22Q9BRQ3 303 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 FSD1LQ9BXM9 530 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 TLR10Q9BXR5 811 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 SEMA6CQ9H3T2 930 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 OSGEPL1Q9H4B0 414 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 ASCL3Q9NQ33 180 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 THSD1Q9NS62 852 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 VPS18Q9P253 973 aa13.49□□□□□ -0.25
VPS9D1-204ENST00000565023 LOC285095A0A1B0GVY8 99 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 GOLGA6L9A6NEM1 432 aa13.48□□□□□ -0.25
VPS9D1-204ENST00000565023 PLD2O14939 933 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms