RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 MARCH4Q9P2E8 410 aaPredicted RBP11.03□□□□□ -0.64
SF3B3-205ENST00000564899 TBK1Q9UHD2 729 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 LGALS13Q9UHV8 139 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 CD84Q9UIB8 345 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 APPL1Q9UKG1 709 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 FBXO5Q9UKT4 447 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 FZD4Q9ULV1 537 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 NCKAP1Q9Y2A7 1128 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 PSAT1Q9Y617 370 aa11.03□□□□□ -0.64
SF3B3-205ENST00000564899 FLNBO75369 2602 aaKnown RBP11.02□□□□□ -0.65
SF3B3-205ENST00000564899 IQANK1A0A1B0GTG1 560 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 RGSL1A5PLK6 1076 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 WNT9AO14904 365 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 TSPAN6O43657 245 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 PLRG1O43660 514 aaKnown RBP11.02□□□□□ -0.65
SF3B3-205ENST00000564899 LZTS3O60299 673 aaPredicted RBP11.02□□□□□ -0.65
SF3B3-205ENST00000564899 MMP20O60882 483 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 KRT38O76015 456 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 SRP72O76094 671 aaKnown RBP11.02□□□□□ -0.65
SF3B3-205ENST00000564899 PCDH8O95206 1070 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 SYF2O95926 243 aaKnown RBP11.02□□□□□ -0.65
SF3B3-205ENST00000564899 F7P08709 466 aaPredicted RBP11.02□□□□□ -0.65
SF3B3-205ENST00000564899 PRSS56P0CW18 603 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 C6P13671 934 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 MPLP40238 635 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 ETV3P41162 512 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 CD151P48509 253 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 TAS2R38P59533 333 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 DCDC1P59894 354 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 MPP1Q00013 466 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 CACNG1Q06432 222 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 FOXC1Q12948 553 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 CTBP1Q13363 440 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 SEMA3AQ14563 771 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 CHRNA6Q15825 494 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 AARS2Q5JTZ9 985 aaKnown RBP11.02□□□□□ -0.65
SF3B3-205ENST00000564899 GRTP1Q5TC63 336 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 ANO7Q6IWH7 933 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 Q6ZVL8 140 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 USP30Q70CQ3 517 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 SDCCAG8Q86SQ7 713 aaPredicted RBP11.02□□□□□ -0.65
SF3B3-205ENST00000564899 LDB1Q86U70 411 aaPredicted RBP11.02□□□□□ -0.65
SF3B3-205ENST00000564899 CILP2Q8IUL8 1156 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 NRSN1Q8IZ57 195 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 PGBD3Q8N328 593 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 GPR150Q8NGU9 434 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 OR14C36Q8NHC7 312 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 DTD2Q96FN9 168 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 PGM2Q96G03 612 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 SGSM3Q96HU1 749 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 PKNOX2Q96KN3 472 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 COQ10AQ96MF6 247 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 HHIPQ96QV1 700 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 RBBP8Q99708 897 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 CDH19Q9H159 772 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 STMN4Q9H169 189 aaPredicted RBP11.02□□□□□ -0.65
SF3B3-205ENST00000564899 FAM83DQ9H4H8 585 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 IL26Q9NPH9 171 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 MED4Q9NPJ6 270 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 FBXO6Q9NRD1 293 aaPredicted RBP11.02□□□□□ -0.65
SF3B3-205ENST00000564899 NFKBIL1Q9UBC1 381 aaPredicted RBP11.02□□□□□ -0.65
SF3B3-205ENST00000564899 ABCA7Q8IZY2 2146 aa11.02□□□□□ -0.65
SF3B3-205ENST00000564899 SRRM3A6NNA2 597 aaPredicted RBP11.01□□□□□ -0.65
SF3B3-205ENST00000564899 GAPDHSO14556 408 aaPredicted RBP11.01□□□□□ -0.65
SF3B3-205ENST00000564899 PFDN6O15212 129 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 GPR39O43194 453 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 RECQL5O94762 991 aaPredicted RBP11.01□□□□□ -0.65
SF3B3-205ENST00000564899 GM2AP17900 193 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 KRT15P19012 456 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 CNTFP26441 200 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 ATP5DP30049 168 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 CNR2P34972 360 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 SPRP35270 261 aaPredicted RBP11.01□□□□□ -0.65
SF3B3-205ENST00000564899 ABCG1P45844 678 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 NOVA1P51513 510 aaKnown RBP11.01□□□□□ -0.65
SF3B3-205ENST00000564899 ADPRHP54922 357 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 NFATC2Q13469 925 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 BMPR2Q13873 1038 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 TYSND1Q2T9J0 566 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 ZNF284Q2VY69 593 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 TTMPQ5BVD1 217 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 LGSNQ5TDP6 509 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 AGBL2Q5U5Z8 902 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 TAS2R42Q7RTR8 314 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 SNX20Q7Z614 316 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 TECPR1Q7Z6L1 1165 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 GALNT7Q86SF2 657 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 FAM124AQ86V42 546 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 RAVER1Q8IY67 606 aaKnown RBP11.01□□□□□ -0.65
SF3B3-205ENST00000564899 CYP4X1Q8N118 509 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 ZNF398Q8TD17 642 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 GAB3Q8WWW8 586 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 SCG3Q8WXD2 468 aaKnown RBP11.01□□□□□ -0.65
SF3B3-205ENST00000564899 GATA6Q92908 595 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 ARL8AQ96BM9 186 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 NUS1Q96E22 293 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 ATXN7L3BQ96GX2 97 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 RHOJQ9H4E5 214 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 FAM96AQ9H5X1 160 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 ASB8Q9H765 288 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms