RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 AGBL5Q8NDL9 886 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 OR2T3Q8NH03 318 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 SPATA22Q8NHS9 363 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 CCDC26Q8TAB7 109 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 NSMCE1Q8WV22 266 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 SLCO2A1Q92959 643 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 CLIP3Q96DZ5 547 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 IMP4Q96G21 291 aaKnown RBP5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 CCDC114Q96M63 670 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 GDAP1L1Q96MZ0 367 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 AGAP3Q96P47 875 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 FCRL5Q96RD9 977 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 NUDCD1Q96RS6 583 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 RBM15Q96T37 977 aaKnown RBP eCLIP5.23□□□□□ -1.575e-8■□□□□ 10.7
HERPUD1-207ENST00000563781 KRT12Q99456 494 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 VAT1Q99536 393 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 SEMA3CQ99985 751 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 HEPHQ9BQS7 1158 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 MLPHQ9BV36 600 aaPredicted RBP5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 CARD6Q9BX69 1037 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 HDAC8Q9BY41 377 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 POLR1EQ9GZS1 481 aaKnown RBP5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 SLC25A51Q9H1U9 297 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 SLC6A17Q9H1V8 727 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 RSPH9Q9H1X1 276 aaPredicted RBP5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 GBA3Q9H227 469 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 MFSD1Q9H3U5 465 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 PCDH9Q9HC56 1237 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 CD93Q9NPY3 652 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 RRAGDQ9NQL2 400 aaPredicted RBP5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 PRMT8Q9NR22 394 aaPredicted RBP5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 LUZP4Q9P127 313 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 KLHL8Q9P2G9 620 aaPredicted RBP5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 HECAQ9UBI9 543 aaPredicted RBP5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 SUN2Q9UH99 717 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 PCYOX1Q9UHG3 505 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 SARDHQ9UL12 918 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 TTLL3Q9Y4R7 772 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 OAS3Q9Y6K5 1087 aaKnown RBP5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 FRYLO94915 3013 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 BPTFQ12830 3046 aa5.23□□□□□ -1.57
HERPUD1-207ENST00000563781 WDR87Q6ZQQ6 2873 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 TCRBV21S2A2A0A5A6 115 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 TSPAN11A1L157 253 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 PLK4O00444 970 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 TRAFD1O14545 582 aaPredicted RBP5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 ALOX15BO15296 676 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 TTI1O43156 1089 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 RAD51CO43502 376 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 SIGLEC6O43699 453 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 SYNCRIPO60506 623 aaKnown RBP5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 ATG13O75143 517 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 PPM1BO75688 479 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 POP4O95707 220 aaKnown RBP5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 MT-CYBP00156 380 aaPredicted RBP5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 PRLP01236 227 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 KRT14P02533 472 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 UGT2B4P06133 528 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 GABRG2P18507 467 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 IVDP26440 423 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 ADRA1AP35348 466 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 DRD3P35462 400 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 CD86P42081 329 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 MAGEA6P43360 314 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 PSMD8P48556 350 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 VPS41P49754 854 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 WNT3AP56704 352 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 MRPS25P82663 173 aaKnown RBP5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 DR1Q01658 176 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 DMWDQ09019 674 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 SEMA5AQ13591 1074 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 PTK6Q13882 451 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 DHX34Q14147 1143 aaKnown RBP5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 STARD3Q14849 445 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 TRIP13Q15645 432 aaPredicted RBP5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 SLC14A2Q15849 920 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 PARP6Q2NL67 630 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 RALGPS1Q5JS13 557 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 FAXCQ5TGI0 409 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 ZNF776Q68DI1 518 aaPredicted RBP5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 KCTD11Q693B1 232 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 DENND5AQ6IQ26 1287 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 PARS2Q7L3T8 475 aaKnown RBP5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 RASSF3Q86WH2 238 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 CACUL1Q86Y37 369 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 CAMK1DQ8IU85 385 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 MMAAQ8IVH4 418 aaKnown RBP5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 MAML2Q8IZL2 1156 aaPredicted RBP5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 BBS5Q8N3I7 341 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 RYBPQ8N488 228 aaPredicted RBP5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 ARHGEF39Q8N4T4 335 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 MMGT1Q8N4V1 131 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 AADATQ8N5Z0 425 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 PAF1Q8N7H5 531 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 CEP112Q8N8E3 955 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 TMIEQ8NEW7 156 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 PIP4K2CQ8TBX8 421 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 GRK7Q8WTQ7 553 aa5.22□□□□□ -1.57
HERPUD1-207ENST00000563781 OR8D1Q8WZ84 308 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms