RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 CARD9Q9H257 536 aa15.58■□□□□ 0.08
CLK3-211ENST00000563297 ZFYVE1Q9HBF4 777 aa15.58■□□□□ 0.08
CLK3-211ENST00000563297 ATXN10Q9UBB4 475 aa15.58■□□□□ 0.08
CLK3-211ENST00000563297 HEY1Q9Y5J3 304 aa15.58■□□□□ 0.08
CLK3-211ENST00000563297 BSNQ9UPA5 3926 aa15.58■□□□□ 0.08
CLK3-211ENST00000563297 C3orf70A6NLC5 250 aaPredicted RBP15.57■□□□□ 0.08
CLK3-211ENST00000563297 GRID2O43424 1007 aa15.57■□□□□ 0.08
CLK3-211ENST00000563297 DUX1O43812 170 aa15.57■□□□□ 0.08
CLK3-211ENST00000563297 NUAK1O60285 661 aa15.57■□□□□ 0.08
CLK3-211ENST00000563297 SNX2O60749 519 aa15.57■□□□□ 0.08
CLK3-211ENST00000563297 SFTPCP11686 197 aa15.57■□□□□ 0.08
CLK3-211ENST00000563297 PPM1FP49593 454 aaPredicted RBP15.57■□□□□ 0.08
CLK3-211ENST00000563297 MC2RQ01718 297 aa15.57■□□□□ 0.08
CLK3-211ENST00000563297 GALNT3Q14435 633 aa15.57■□□□□ 0.08
CLK3-211ENST00000563297 SNAP47Q5SQN1 464 aa15.57■□□□□ 0.08
CLK3-211ENST00000563297 ZNF648Q5T619 568 aaPredicted RBP15.57■□□□□ 0.08
CLK3-211ENST00000563297 ANKS6Q68DC2 871 aa15.57■□□□□ 0.08
CLK3-211ENST00000563297 SLC9A4Q6AI14 798 aa15.57■□□□□ 0.08
CLK3-211ENST00000563297 PRICKLE2Q7Z3G6 844 aa15.57■□□□□ 0.08
CLK3-211ENST00000563297 KDELC2Q7Z4H8 507 aa15.57■□□□□ 0.08
CLK3-211ENST00000563297 SLC9B2Q86UD5 537 aa15.57■□□□□ 0.08
CLK3-211ENST00000563297 CACNA2D3Q8IZS8 1091 aa15.57■□□□□ 0.08
CLK3-211ENST00000563297 IL22RA1Q8N6P7 574 aa15.57■□□□□ 0.08
CLK3-211ENST00000563297 SLC35G2Q8TBE7 412 aa15.57■□□□□ 0.08
CLK3-211ENST00000563297 SH3KBP1Q96B97 665 aa15.57■□□□□ 0.08
CLK3-211ENST00000563297 ZNF830Q96NB3 372 aaPredicted RBP15.57■□□□□ 0.08
CLK3-211ENST00000563297 TRIB3Q96RU7 358 aa15.57■□□□□ 0.08
CLK3-211ENST00000563297 HERPUD2Q9BSE4 406 aa15.57■□□□□ 0.08
CLK3-211ENST00000563297 CEP41Q9BYV8 373 aa15.57■□□□□ 0.08
CLK3-211ENST00000563297 ARFGAP3Q9NP61 516 aa15.57■□□□□ 0.08
CLK3-211ENST00000563297 PILRAQ9UKJ1 303 aa15.57■□□□□ 0.08
CLK3-211ENST00000563297 KIR2DS5A0A0G2JLQ3 304 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 A0A0G2JNG1 304 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 LRRD1A4D1F6 860 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 ZNF487B1APH4 448 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 KIR2DS3K7RE56 304 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 SLC25A14O95258 325 aaPredicted RBP15.56■□□□□ 0.08
CLK3-211ENST00000563297 WISP1O95388 367 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 TMEM253P0C7T8 217 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 F3P13726 295 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 LIFP15018 202 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 ZNF8P17098 575 aaPredicted RBP15.56■□□□□ 0.08
CLK3-211ENST00000563297 RAB15P59190 212 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 NFKB2Q00653 900 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 KCNC4Q03721 635 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 AP1B1Q10567 949 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 KIR2DS5Q14953 304 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 CLCA4Q14CN2 919 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 NPNTQ6UXI9 565 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 TMC3Q7Z5M5 1100 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 GPR26Q8NDV2 337 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 OR8K1Q8NGG5 319 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 RTP4Q96DX8 246 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 IMP4Q96G21 291 aaKnown RBP15.56■□□□□ 0.08
CLK3-211ENST00000563297 DNAJC7Q99615 494 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 SPATA16Q9BXB7 569 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 STN1Q9H668 368 aaKnown RBP15.56■□□□□ 0.08
CLK3-211ENST00000563297 CLMPQ9H6B4 373 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 MAGEE1Q9HCI5 957 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 TRIM39Q9HCM9 518 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 PRDM8Q9NQV8 689 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 FBXO8Q9NRD0 319 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 CPNE7Q9UBL6 633 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 SHOC2Q9UQ13 582 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 HEMK1Q9Y5R4 338 aaPredicted RBP15.56■□□□□ 0.08
CLK3-211ENST00000563297 ADGRG1Q9Y653 693 aa15.56■□□□□ 0.08
CLK3-211ENST00000563297 SSU72P8A0A1W2PR75 194 aa15.55■□□□□ 0.08
CLK3-211ENST00000563297 OR5K4A6NMS3 321 aa15.55■□□□□ 0.08
CLK3-211ENST00000563297 RAD1O60671 282 aa15.55■□□□□ 0.08
CLK3-211ENST00000563297 PIRTP0C851 137 aa15.55■□□□□ 0.08
CLK3-211ENST00000563297 SLC2A4P14672 509 aa15.55■□□□□ 0.08
CLK3-211ENST00000563297 CLCNKAP51800 687 aa15.55■□□□□ 0.08
CLK3-211ENST00000563297 EPHA4P54764 986 aa15.55■□□□□ 0.08
CLK3-211ENST00000563297 ADGRG6Q86SQ4 1221 aa15.55■□□□□ 0.08
CLK3-211ENST00000563297 NT5DC3Q86UY8 548 aa15.55■□□□□ 0.08
CLK3-211ENST00000563297 VSIG1Q86XK7 387 aa15.55■□□□□ 0.08
CLK3-211ENST00000563297 TADA1Q96BN2 335 aa15.55■□□□□ 0.08
CLK3-211ENST00000563297 AGAP3Q96P47 875 aa15.55■□□□□ 0.08
CLK3-211ENST00000563297 PLEKHG4BQ96PX9 1271 aa15.55■□□□□ 0.08
CLK3-211ENST00000563297 TEFMQ96QE5 360 aaKnown RBP15.55■□□□□ 0.08
CLK3-211ENST00000563297 CHP1Q99653 195 aa15.55■□□□□ 0.08
CLK3-211ENST00000563297 CTRCQ99895 268 aa15.55■□□□□ 0.08
CLK3-211ENST00000563297 TBC1D10AQ9BXI6 508 aa15.55■□□□□ 0.08
CLK3-211ENST00000563297 MAK16Q9BXY0 300 aaKnown RBP15.55■□□□□ 0.08
CLK3-211ENST00000563297 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.55■□□□□ 0.08
CLK3-211ENST00000563297 ZMYND15Q9H091 742 aa15.55■□□□□ 0.08
CLK3-211ENST00000563297 SLC25A51Q9H1U9 297 aa15.55■□□□□ 0.08
CLK3-211ENST00000563297 OR2AG1Q9H205 316 aa15.55■□□□□ 0.08
CLK3-211ENST00000563297 DEF6Q9H4E7 631 aa15.55■□□□□ 0.08
CLK3-211ENST00000563297 KLC4Q9NSK0 619 aa15.55■□□□□ 0.08
CLK3-211ENST00000563297 GEMIN8Q9NWZ8 242 aaKnown RBP15.55■□□□□ 0.08
CLK3-211ENST00000563297 SCHIP1Q9P0W5 487 aaPredicted RBP15.55■□□□□ 0.08
CLK3-211ENST00000563297 SLC23A2Q9UGH3 650 aa15.55■□□□□ 0.08
CLK3-211ENST00000563297 APOL1O14791 398 aa15.54■□□□□ 0.08
CLK3-211ENST00000563297 CHUKO15111 745 aa15.54■□□□□ 0.08
CLK3-211ENST00000563297 SUV39H1O43463 412 aa15.54■□□□□ 0.08
CLK3-211ENST00000563297 XRCC1P18887 633 aaPredicted RBP15.54■□□□□ 0.08
CLK3-211ENST00000563297 ARHGAP25P42331 645 aa15.54■□□□□ 0.08
CLK3-211ENST00000563297 MAPK9P45984 424 aa15.54■□□□□ 0.08
CLK3-211ENST00000563297 DCDC1P59894 354 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms