RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 C22orf31O95567 290 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 NCS1P62166 190 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 HERVK_113P63132 956 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 FSCN1Q16658 493 aaKnown RBP16.4■□□□□ 0.22
TPM1-228ENST00000560975 DGUOKQ16854 277 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 ARL13BQ3SXY8 428 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 ZDHHC13Q8IUH4 622 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 ARMC8Q8IUR7 673 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 RIMKLAQ8IXN7 391 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 ITCHQ96J02 903 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 MBOAT4Q96T53 435 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 VAT1Q99536 393 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 ERVK-6Q9BXR3 956 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 R3HDMLQ9H3Y0 253 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 WDR6Q9NNW5 1121 aaKnown RBP16.4■□□□□ 0.22
TPM1-228ENST00000560975 OR12D3Q9UGF7 316 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 CRYL1Q9Y2S2 319 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 IFT52Q9Y366 437 aa16.4■□□□□ 0.22
TPM1-228ENST00000560975 CCDC154A6NI56 674 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 SYCE1LA8MT33 242 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 G3V2T6 193 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 AP3B1O00203 1094 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 DLGAP3O95886 979 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 FYNP06241 537 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 INSRRP14616 1297 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 PRKACGP22612 351 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 RPL34P49207 117 aaKnown RBP16.39■□□□□ 0.21
TPM1-228ENST00000560975 MTPNP58546 118 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 SEMA3BQ13214 749 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 KCNAB2Q13303 367 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 PLA2G4EQ3MJ16 856 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 TTC23Q5W5X9 447 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 LAIR2Q6ISS4 152 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 FAM86B1Q8N7N1 296 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 OR6Q1Q8NGQ2 317 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 NUDT8Q8WV74 236 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 EDEM1Q92611 657 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 UBXN10Q96LJ8 280 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 PPM1MQ96MI6 270 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 AS3MTQ9HBK9 375 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 RLFQ13129 1914 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 YJEFN3A6XGL0 299 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 TSPAN1O60635 241 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 SEC24AO95486 1093 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 CDH1P12830 882 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 MAP3K7CLP57077 242 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 FOXM1Q08050 763 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 PLPPR4Q7Z2D5 763 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 OR6P1Q8NGX9 317 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 FBXO30Q8TB52 745 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 ITFG1Q8TB96 612 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 CNIH3Q8TBE1 160 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 TREX1Q9NSU2 369 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 UTS2RQ9UKP6 389 aa16.39■□□□□ 0.21
TPM1-228ENST00000560975 ANKRD34BA5PLL1 514 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 SLC1A7O00341 560 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 SNPHO15079 494 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 HBP1O60381 514 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 MATN4O95460 622 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 KRT75O95678 551 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 PGK2P07205 417 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 EMX1Q04741 257 aaPredicted RBP16.38■□□□□ 0.21
TPM1-228ENST00000560975 SELPLGQ14242 412 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 CELF3Q5SZQ8 465 aaKnown RBP16.38■□□□□ 0.21
TPM1-228ENST00000560975 DTWD1Q8N5C7 304 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 MTMR14Q8NCE2 650 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 PABPC5Q96DU9 382 aaKnown RBP16.38■□□□□ 0.21
TPM1-228ENST00000560975 L3HYPDHQ96EM0 354 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 BTN2A3PQ96KV6 586 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 DHRS1Q96LJ7 313 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 MED10Q9BTT4 135 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 ULBP1Q9BZM6 244 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 HOXD1Q9GZZ0 328 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 NACA2Q9H009 215 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 MUC13Q9H3R2 512 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 GOLGA2P5Q9HBQ8 144 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 SEMA4BQ9NPR2 832 aaPredicted RBP16.38■□□□□ 0.21
TPM1-228ENST00000560975 GPR45Q9Y5Y3 372 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 OR51F1A6NGY5 319 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 GNGT2O14610 69 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 CHEK2O96017 543 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 PCMT1P22061 227 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 PAX3P23760 479 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 CD40LGP29965 261 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 ILF2Q12905 390 aaKnown RBP16.38■□□□□ 0.21
TPM1-228ENST00000560975 CLPPQ16740 277 aaPredicted RBP16.38■□□□□ 0.21
TPM1-228ENST00000560975 HIST2H2ACQ16777 129 aaPredicted RBP16.38■□□□□ 0.21
TPM1-228ENST00000560975 FAM187BQ17R55 369 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 CRYBG2Q8N1P7 616 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 ZBED3Q96IU2 234 aaPredicted RBP16.38■□□□□ 0.21
TPM1-228ENST00000560975 CAMKK2Q96RR4 588 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 TKTL2Q9H0I9 626 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 SIK2Q9H0K1 926 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 FAM124BQ9H5Z6 455 aaPredicted RBP16.38■□□□□ 0.21
TPM1-228ENST00000560975 MARCH7Q9H992 704 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 GLOD4Q9HC38 313 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 HOXC10Q9NYD6 342 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 COL4A5P29400 1685 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 MYLKQ15746 1914 aa16.38■□□□□ 0.21
TPM1-228ENST00000560975 SSC5DA1L4H1 1573 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms