RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 ARL10Q8N8L6 244 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 FAM46DQ8NEK8 389 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 OR4K2Q8NGD2 314 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 SCG3Q8WXD2 468 aaKnown RBP15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 C19orf43Q9BQ61 176 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 UGT1A7Q9HAW7 530 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 UGT1A10Q9HAW8 530 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 UGT1A8Q9HAW9 530 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 HOMER3Q9NSC5 361 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 SIRPGQ9P1W8 387 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 PAK5Q9P286 719 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 PADI4Q9UM07 663 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 DOLKQ9UPQ8 538 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 PKP3Q9Y446 797 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 PRKAB1Q9Y478 270 aa15.12■□□□□ 0.01
SNRPA1-213ENST00000560856 CPED1A4D0V7 1026 aa15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 C2orf81A6NN90 581 aa15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 ERI2A8K979 691 aaKnown RBP15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 CES2O00748 559 aa15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 CHUKO15111 745 aa15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 CASC3O15234 703 aaKnown RBP15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 FANCGO15287 622 aa15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 OPA1O60313 960 aa15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 GRIA1P42261 906 aa15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 E2F1Q01094 437 aa15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 INSM1Q01101 510 aaPredicted RBP15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 ILF3Q12906 894 aaKnown RBP eCLIP15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 CDCP2Q5VXM1 449 aa15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 FAM151BQ6UXP7 276 aa15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 EFL1Q7Z2Z2 1120 aaKnown RBP15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 OR13C4Q8NGS5 318 aa15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 IFI44Q8TCB0 444 aa15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 ACTRT1Q8TDG2 376 aa15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 GATA6Q92908 595 aa15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 GSDMCQ9BYG8 508 aa15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 OR2AG1Q9H205 316 aa15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 RMI1Q9H9A7 625 aa15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 RAB6BQ9NRW1 208 aa15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 PIH1D1Q9NWS0 290 aaKnown RBP15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 TAAR2Q9P1P5 351 aa15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 GULP1Q9UBP9 304 aa15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 GPSM3Q9Y4H4 160 aa15.11■□□□□ 0.01
SNRPA1-213ENST00000560856 GLYATL1P3A0A0U1RQE8 302 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 PRR19A6NJB7 356 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 AGAP14A8MT82 685 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 ZNF185O15231 689 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 MTX2O75431 263 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 CRTAMO95727 393 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 RPIAP49247 311 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 CAMK2BQ13554 666 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 PEX6Q13608 980 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 HLTFQ14527 1009 aaKnown RBP eCLIP15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 SLC30A9Q6PML9 568 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 MICALCLQ6ZW33 695 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 TMPRSS12Q86WS5 348 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 GALNT13Q8IUC8 556 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 PHYKPLQ8IUZ5 450 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 ZNF547Q8IVP9 402 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 CACTIN-AS1Q8N1I8 211 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 CCDC89Q8N998 374 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 OR52K1Q8NGK4 314 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 ZNF398Q8TD17 642 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 GLMNQ92990 594 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 AP1M1Q9BXS5 423 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 CASS4Q9NQ75 786 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 KCND1Q9NSA2 647 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 SMOXQ9NWM0 555 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 ZNHIT2Q9UHR6 403 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 FKBPLQ9UIM3 349 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 RABGEF1Q9UJ41 708 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 NEU2Q9Y3R4 380 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 IGF2RP11717 2491 aa15.1■□□□□ 0.01
SNRPA1-213ENST00000560856 FAM149AA5PLN7 773 aa15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 MROH6A6NGR9 719 aa15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 GPR89AB7ZAQ6 455 aa15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 PGRMC1O00264 195 aaKnown RBP15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 GRID2O43424 1007 aa15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 VEGFDO43915 354 aa15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 EML2O95834 649 aa15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 CAPNS1P04632 268 aa15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 GPR89BP0CG08 455 aa15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 MSNP26038 577 aaKnown RBP15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 ACTN2P35609 894 aa15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 ACTR1BP42025 376 aa15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 ACTR1AP61163 376 aa15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 TMEM115Q12893 351 aaPredicted RBP15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 LRP8Q14114 963 aa15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 C14orf28Q4W4Y0 310 aa15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 CERCAMQ5T4B2 595 aa15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 HES3Q5TGS1 186 aa15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 PAPD7Q5XG87 772 aaKnown RBP15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 LINC00523Q86TU6 105 aa15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 NAGSQ8N159 534 aa15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 GALNT15Q8N3T1 639 aa15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 DDHD1Q8NEL9 900 aa15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 PATE1Q8WXA2 126 aa15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 NAT6Q93015 286 aa15.09■□□□□ 0.01
SNRPA1-213ENST00000560856 MAGOHBQ96A72 148 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms