RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 MAXP61244 160 aa17.61■□□□□ 0.41
TSPAN3-208ENST00000560514 MRPL49Q13405 166 aaKnown RBP17.61■□□□□ 0.41
TSPAN3-208ENST00000560514 PTPRRQ15256 657 aa17.61■□□□□ 0.41
TSPAN3-208ENST00000560514 CA9Q16790 459 aa17.61■□□□□ 0.41
TSPAN3-208ENST00000560514 PPP1R15BQ5SWA1 713 aa17.61■□□□□ 0.41
TSPAN3-208ENST00000560514 ENOX1Q8TC92 643 aaKnown RBP17.61■□□□□ 0.41
TSPAN3-208ENST00000560514 KCTD15Q96SI1 283 aaPredicted RBP17.61■□□□□ 0.41
TSPAN3-208ENST00000560514 MGME1Q9BQP7 344 aa17.61■□□□□ 0.41
TSPAN3-208ENST00000560514 GANQ9H2C0 597 aa17.61■□□□□ 0.41
TSPAN3-208ENST00000560514 ZNF768Q9H5H4 540 aaKnown RBP17.61■□□□□ 0.41
TSPAN3-208ENST00000560514 FAM207AQ9NSI2 230 aaPredicted RBP17.61■□□□□ 0.41
TSPAN3-208ENST00000560514 SRPK3Q9UPE1 567 aa17.61■□□□□ 0.41
TSPAN3-208ENST00000560514 ZNF451Q9Y4E5 1061 aa17.61■□□□□ 0.41
TSPAN3-208ENST00000560514 HIVEP3Q5T1R4 2406 aa17.61■□□□□ 0.41
TSPAN3-208ENST00000560514 A0A0U1RQS6 177 aa17.6■□□□□ 0.41
TSPAN3-208ENST00000560514 TCRBV5S1A1TA0A578 114 aa17.6■□□□□ 0.41
TSPAN3-208ENST00000560514 RNF8O76064 485 aa17.6■□□□□ 0.41
TSPAN3-208ENST00000560514 SORBS2O94875 1100 aaKnown RBP17.6■□□□□ 0.41
TSPAN3-208ENST00000560514 FGF5P12034 268 aa17.6■□□□□ 0.41
TSPAN3-208ENST00000560514 TNFRSF8P28908 595 aa17.6■□□□□ 0.41
TSPAN3-208ENST00000560514 ZNF135P52742 658 aaPredicted RBP17.6■□□□□ 0.41
TSPAN3-208ENST00000560514 RPS15P62841 145 aaKnown RBP17.6■□□□□ 0.41
TSPAN3-208ENST00000560514 PTSQ03393 145 aa17.6■□□□□ 0.41
TSPAN3-208ENST00000560514 CHRNA6Q15825 494 aa17.6■□□□□ 0.41
TSPAN3-208ENST00000560514 UGT8Q16880 541 aa17.6■□□□□ 0.41
TSPAN3-208ENST00000560514 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.6■□□□□ 0.41
TSPAN3-208ENST00000560514 TCP11X2Q5H9J9 407 aa17.6■□□□□ 0.41
TSPAN3-208ENST00000560514 PGBD5Q8N414 524 aa17.6■□□□□ 0.41
TSPAN3-208ENST00000560514 PHF12Q96QT6 1004 aa17.6■□□□□ 0.41
TSPAN3-208ENST00000560514 AGAP2Q99490 1192 aa17.6■□□□□ 0.41
TSPAN3-208ENST00000560514 SNRNP25Q9BV90 132 aaKnown RBP17.6■□□□□ 0.41
TSPAN3-208ENST00000560514 GPR87Q9BY21 358 aa17.6■□□□□ 0.41
TSPAN3-208ENST00000560514 OSGEPL1Q9H4B0 414 aa17.6■□□□□ 0.41
TSPAN3-208ENST00000560514 ZWILCHQ9H900 591 aa17.6■□□□□ 0.41
TSPAN3-208ENST00000560514 UCK1Q9HA47 277 aa17.6■□□□□ 0.41
TSPAN3-208ENST00000560514 PDE7BQ9NP56 450 aa17.6■□□□□ 0.41
TSPAN3-208ENST00000560514 DNPEPQ9ULA0 475 aa17.6■□□□□ 0.41
TSPAN3-208ENST00000560514 PPIL1Q9Y3C6 166 aa17.6■□□□□ 0.41
TSPAN3-208ENST00000560514 ARGFXA6NJG6 315 aa17.59■□□□□ 0.41
TSPAN3-208ENST00000560514 PRPSAP2O60256 369 aa17.59■□□□□ 0.41
TSPAN3-208ENST00000560514 DPM1O60762 260 aa17.59■□□□□ 0.41
TSPAN3-208ENST00000560514 JAM2P57087 298 aa17.59■□□□□ 0.41
TSPAN3-208ENST00000560514 ITKQ08881 620 aa17.59■□□□□ 0.41
TSPAN3-208ENST00000560514 CHAF1BQ13112 559 aa17.59■□□□□ 0.41
TSPAN3-208ENST00000560514 MARC1Q5VT66 337 aa17.59■□□□□ 0.41
TSPAN3-208ENST00000560514 CACHD1Q5VU97 1274 aa17.59■□□□□ 0.41
TSPAN3-208ENST00000560514 TMEM26Q6ZUK4 368 aa17.59■□□□□ 0.41
TSPAN3-208ENST00000560514 PIH1D2Q8WWB5 315 aa17.59■□□□□ 0.41
TSPAN3-208ENST00000560514 ING2Q9H160 280 aa17.59■□□□□ 0.41
TSPAN3-208ENST00000560514 TAB2Q9NYJ8 693 aa17.59■□□□□ 0.41
TSPAN3-208ENST00000560514 GOLGA6L3A6NEY3 463 aa17.58■□□□□ 0.4
TSPAN3-208ENST00000560514 GRID2O43424 1007 aa17.58■□□□□ 0.4
TSPAN3-208ENST00000560514 CLDN1O95832 211 aa17.58■□□□□ 0.4
TSPAN3-208ENST00000560514 ELAVL4P26378 380 aaKnown RBP17.58■□□□□ 0.4
TSPAN3-208ENST00000560514 MMP13P45452 471 aa17.58■□□□□ 0.4
TSPAN3-208ENST00000560514 HCAR3P49019 387 aa17.58■□□□□ 0.4
TSPAN3-208ENST00000560514 PDE1BQ01064 536 aa17.58■□□□□ 0.4
TSPAN3-208ENST00000560514 OGDHQ02218 1023 aa17.58■□□□□ 0.4
TSPAN3-208ENST00000560514 FKBP15Q5T1M5 1219 aa17.58■□□□□ 0.4
TSPAN3-208ENST00000560514 CPZQ66K79 652 aa17.58■□□□□ 0.4
TSPAN3-208ENST00000560514 SYVN1Q86TM6 617 aa17.58■□□□□ 0.4
TSPAN3-208ENST00000560514 TICAM1Q8IUC6 712 aa17.58■□□□□ 0.4
TSPAN3-208ENST00000560514 TP53INP2Q8IXH6 220 aa17.58■□□□□ 0.4
TSPAN3-208ENST00000560514 SRRM1Q8IYB3 904 aaKnown RBP17.58■□□□□ 0.4
TSPAN3-208ENST00000560514 ATPAF2Q8N5M1 289 aa17.58■□□□□ 0.4
TSPAN3-208ENST00000560514 ZDHHC12Q96GR4 267 aa17.58■□□□□ 0.4
TSPAN3-208ENST00000560514 PCMTD1Q96MG8 357 aaPredicted RBP17.58■□□□□ 0.4
TSPAN3-208ENST00000560514 PLEKHG4BQ96PX9 1271 aa17.58■□□□□ 0.4
TSPAN3-208ENST00000560514 BRD8Q9H0E9 1235 aa17.58■□□□□ 0.4
TSPAN3-208ENST00000560514 SAMSN1Q9NSI8 373 aaKnown RBP17.58■□□□□ 0.4
TSPAN3-208ENST00000560514 LUZP4Q9P127 313 aa17.58■□□□□ 0.4
TSPAN3-208ENST00000560514 RARRES3Q9UL19 164 aa17.58■□□□□ 0.4
TSPAN3-208ENST00000560514 PCDHGB7Q9Y5F8 929 aa17.58■□□□□ 0.4
TSPAN3-208ENST00000560514 PCYT1BQ9Y5K3 369 aaPredicted RBP17.58■□□□□ 0.4
TSPAN3-208ENST00000560514 CRYBG3Q68DQ2 2970 aa17.57■□□□□ 0.4
TSPAN3-208ENST00000560514 H3BRJ5 948 aa17.57■□□□□ 0.4
TSPAN3-208ENST00000560514 MTA2O94776 668 aa17.57■□□□□ 0.4
TSPAN3-208ENST00000560514 PDHA1P08559 390 aa17.57■□□□□ 0.4
TSPAN3-208ENST00000560514 XRCC1P18887 633 aaPredicted RBP17.57■□□□□ 0.4
TSPAN3-208ENST00000560514 PTPN4P29074 926 aa17.57■□□□□ 0.4
TSPAN3-208ENST00000560514 ARL4AP40617 200 aa17.57■□□□□ 0.4
TSPAN3-208ENST00000560514 LEPRP48357 1165 aaKnown RBP17.57■□□□□ 0.4
TSPAN3-208ENST00000560514 KLK7P49862 253 aa17.57■□□□□ 0.4
TSPAN3-208ENST00000560514 STC1P52823 247 aa17.57■□□□□ 0.4
TSPAN3-208ENST00000560514 UBE2IP63279 158 aaKnown RBP17.57■□□□□ 0.4
TSPAN3-208ENST00000560514 JMJD6Q6NYC1 403 aaPredicted RBP17.57■□□□□ 0.4
TSPAN3-208ENST00000560514 TMCO3Q6UWJ1 677 aa17.57■□□□□ 0.4
TSPAN3-208ENST00000560514 PRSS42Q7Z5A4 293 aa17.57■□□□□ 0.4
TSPAN3-208ENST00000560514 HPS6Q86YV9 775 aa17.57■□□□□ 0.4
TSPAN3-208ENST00000560514 PSTKQ8IV42 348 aaKnown RBP17.57■□□□□ 0.4
TSPAN3-208ENST00000560514 C5orf34Q96MH7 638 aa17.57■□□□□ 0.4
TSPAN3-208ENST00000560514 AGPAT1Q99943 283 aa17.57■□□□□ 0.4
TSPAN3-208ENST00000560514 MFRPQ9BY79 579 aa17.57■□□□□ 0.4
TSPAN3-208ENST00000560514 CARD9Q9H257 536 aa17.57■□□□□ 0.4
TSPAN3-208ENST00000560514 KLC4Q9NSK0 619 aa17.57■□□□□ 0.4
TSPAN3-208ENST00000560514 LMBRD1Q9NUN5 540 aa17.57■□□□□ 0.4
TSPAN3-208ENST00000560514 PARVAQ9NVD7 372 aa17.57■□□□□ 0.4
TSPAN3-208ENST00000560514 OGFRQ9NZT2 677 aa17.57■□□□□ 0.4
TSPAN3-208ENST00000560514 CWC15Q9P013 229 aaKnown RBP17.57■□□□□ 0.4
TSPAN3-208ENST00000560514 SLC30A1Q9Y6M5 507 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms