RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 ZMYND12Q9H0C1 365 aa6.18□□□□□ -1.42
USP8-210ENST00000560379 ABCG8Q9H221 673 aa6.18□□□□□ -1.42
USP8-210ENST00000560379 CXorf36Q9H7Y0 433 aa6.18□□□□□ -1.42
USP8-210ENST00000560379 FANCEQ9HB96 536 aa6.18□□□□□ -1.42
USP8-210ENST00000560379 IL23AQ9NPF7 189 aa6.18□□□□□ -1.42
USP8-210ENST00000560379 PXMP2Q9NR77 195 aa6.18□□□□□ -1.42
USP8-210ENST00000560379 BARX2Q9UMQ3 279 aaPredicted RBP6.18□□□□□ -1.42
USP8-210ENST00000560379 CDYLQ9Y232 598 aa6.18□□□□□ -1.42
USP8-210ENST00000560379 RCE1Q9Y256 329 aa6.18□□□□□ -1.42
USP8-210ENST00000560379 Q9Y3F1 56 aa6.18□□□□□ -1.42
USP8-210ENST00000560379 PCDHGA5Q9Y5G8 931 aa6.18□□□□□ -1.42
USP8-210ENST00000560379 PCDHGA1Q9Y5H4 931 aa6.18□□□□□ -1.42
USP8-210ENST00000560379 ALPK3Q96L96 1907 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 TNRC18O15417 2968 aaPredicted RBP6.17□□□□□ -1.42
USP8-210ENST00000560379 URADA6NGE7 173 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 F8VZ95 297 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 AGPSO00116 658 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 O00370 1275 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 MEIS2O14770 477 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 MATN3O15232 486 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 HOXA3O43365 443 aaPredicted RBP6.17□□□□□ -1.42
USP8-210ENST00000560379 DUSP11O75319 330 aaKnown RBP6.17□□□□□ -1.42
USP8-210ENST00000560379 STC2O76061 302 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 HEXIM1O94992 359 aaKnown RBP6.17□□□□□ -1.42
USP8-210ENST00000560379 CCNDBP1O95273 360 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 C22orf31O95567 290 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 YEATS4O95619 227 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 SNAI1O95863 264 aaPredicted RBP6.17□□□□□ -1.42
USP8-210ENST00000560379 TPM1P09493 284 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 WEE2P0C1S8 567 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 CDH3P22223 829 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 SFPQP23246 707 aaKnown RBP eCLIP6.17□□□□□ -1.42
USP8-210ENST00000560379 TNFRSF8P28908 595 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 CCND2P30279 289 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 CCND3P30281 292 aaPredicted RBP6.17□□□□□ -1.42
USP8-210ENST00000560379 RGS19P49795 217 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 ARF5P84085 180 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 CNTN2Q02246 1040 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 HGFACQ04756 655 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 LMAN2Q12907 356 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 CNGA3Q16281 694 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 CLPPQ16740 277 aaPredicted RBP6.17□□□□□ -1.42
USP8-210ENST00000560379 ME3Q16798 604 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 FAM214AQ32MH5 1076 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 ZRANB3Q5FWF4 1079 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 DNTTIP2Q5QJE6 756 aaKnown RBP6.17□□□□□ -1.42
USP8-210ENST00000560379 PRR31Q5SQ13 230 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 ARHGEF16Q5VV41 709 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 TAPT1Q6NXT6 567 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 DENND1BQ6P3S1 775 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 CCDC80Q76M96 950 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 MARK2Q7KZI7 788 aaKnown RBP6.17□□□□□ -1.42
USP8-210ENST00000560379 CACNA2D4Q7Z3S7 1137 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 ADGRE4PQ86SQ3 457 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 BBOF1Q8ND07 529 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 TRPV1Q8NER1 839 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 SUN3Q8TAQ9 357 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 SETD6Q8TBK2 473 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 TMEM171Q8WVE6 324 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 SGCDQ92629 289 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 TFAP2CQ92754 450 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 RAB7BQ96AH8 199 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 REXO5Q96IC2 774 aaKnown RBP6.17□□□□□ -1.42
USP8-210ENST00000560379 AJUBAQ96IF1 538 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 PPP1R10Q96QC0 940 aaKnown RBP6.17□□□□□ -1.42
USP8-210ENST00000560379 SH3GL2Q99962 352 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 FAM118BQ9BPY3 351 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 KLHL4Q9C0H6 718 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 UPF3AQ9H1J1 476 aaKnown RBP6.17□□□□□ -1.42
USP8-210ENST00000560379 DPH5Q9H2P9 285 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 TTYH1Q9H313 450 aaPredicted RBP6.17□□□□□ -1.42
USP8-210ENST00000560379 PSTPIP2Q9H939 334 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 L2HGDHQ9H9P8 463 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 C6orf50Q9HD87 102 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 PFDN4Q9NQP4 134 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 PCDHB16Q9NRJ7 776 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 SLC25A10Q9UBX3 287 aaPredicted RBP6.17□□□□□ -1.42
USP8-210ENST00000560379 CORO1CQ9ULV4 474 aaPredicted RBP6.17□□□□□ -1.42
USP8-210ENST00000560379 PCDHB7Q9Y5E2 793 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 DNAH12Q6ZR08 3092 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 SCN10AQ9Y5Y9 1956 aa6.17□□□□□ -1.42
USP8-210ENST00000560379 H0YCG3 227 aa6.16□□□□□ -1.42
USP8-210ENST00000560379 TNFSF14O43557 240 aa6.16□□□□□ -1.42
USP8-210ENST00000560379 CBFA2T3O75081 653 aa6.16□□□□□ -1.42
USP8-210ENST00000560379 RB1P06400 928 aa6.16□□□□□ -1.42
USP8-210ENST00000560379 SPARCP09486 303 aa6.16□□□□□ -1.42
USP8-210ENST00000560379 SUPT20HL2P0C7V6 817 aa6.16□□□□□ -1.42
USP8-210ENST00000560379 PRG2P13727 222 aa6.16□□□□□ -1.42
USP8-210ENST00000560379 ZNF28P17035 718 aa6.16□□□□□ -1.42
USP8-210ENST00000560379 CPT2P23786 658 aa6.16□□□□□ -1.42
USP8-210ENST00000560379 RBL1P28749 1068 aa6.16□□□□□ -1.42
USP8-210ENST00000560379 HOXA13P31271 388 aaPredicted RBP6.16□□□□□ -1.42
USP8-210ENST00000560379 CNR2P34972 360 aa6.16□□□□□ -1.42
USP8-210ENST00000560379 MAGEA4P43358 317 aa6.16□□□□□ -1.42
USP8-210ENST00000560379 DHPSP49366 369 aaPredicted RBP6.16□□□□□ -1.42
USP8-210ENST00000560379 FAM3BP58499 235 aaPredicted RBP6.16□□□□□ -1.42
USP8-210ENST00000560379 TRA2BP62995 288 aaKnown RBP6.16□□□□□ -1.42
USP8-210ENST00000560379 RNASELQ05823 741 aaKnown RBP6.16□□□□□ -1.42
USP8-210ENST00000560379 PIGFQ07326 219 aa6.16□□□□□ -1.42
USP8-210ENST00000560379 CCDC173Q0VFZ6 552 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms