RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 SCRN2Q96FV2 425 aa12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 TGM7Q96PF1 710 aa12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 MCCC1Q96RQ3 725 aaPredicted RBP12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 SP110Q9HB58 689 aa12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 TMEM63CQ9P1W3 806 aa12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 RWDD2AQ9UIY3 292 aa12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 PCDHGB7Q9Y5F8 929 aa12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 SLC30A1Q9Y6M5 507 aa12.66□□□□□ -0.38
RABGGTA-213ENST00000560127 KIR2DS5A0A0G2JLQ3 304 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 A0A0G2JNG1 304 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 F8VZ95 297 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 KIR2DS3K7RE56 304 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 TOX3O15405 576 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 KIF1CO43896 1103 aaKnown RBP12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 SNX2O60749 519 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 ASMTLO95671 621 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 ACP5P13686 325 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 PTPN4P29074 926 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 HTR7P34969 479 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 RENBPP51606 427 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 AIF1P55008 147 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 GSCP56915 257 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 CDR2Q01850 454 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 KIR2DS5Q14953 304 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 MAN2A1Q16706 1144 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 FAM199XQ6PEV8 388 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 NLRP8Q86W28 1048 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 PPP1R3BQ86XI6 285 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 ZNF677Q86XU0 584 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 PGBD5Q8N414 524 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 NPWQ8N729 165 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 FDCSPQ8NFU4 85 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 SEC14L1Q92503 715 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 PNPLA2Q96AD5 504 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 SNRNP40Q96DI7 357 aaKnown RBP12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 MOCOSQ96EN8 888 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 SMIM14Q96QK8 99 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 SELENOOQ9BVL4 669 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 GPR87Q9BY21 358 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 NOD2Q9HC29 1040 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 GPATCH2LQ9NWQ4 482 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 PCSK5Q92824 1860 aa12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 NIPBLQ6KC79 2804 aaeCLIP12.65□□□□□ -0.38
RABGGTA-213ENST00000560127 SIGLEC16A6NMB1 481 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 OR5K4A6NMS3 321 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 DFFAO00273 331 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 PGLSO95336 258 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 ATP1A1P05023 1023 aaKnown RBP12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 UNGP13051 313 aaPredicted RBP12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 SLC2A4P14672 509 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 UCHL3P15374 230 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 CTPS1P17812 591 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 PTGIRP43119 386 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 ZNF143P52747 638 aaPredicted RBP12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 PTSQ03393 145 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 LBRQ14739 615 aaKnown RBP12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 ZRANB3Q5FWF4 1079 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 MIIPQ5JXC2 388 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 TMCO4Q5TGY1 634 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 LRRC66Q68CR7 880 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 TMEM26Q6ZUK4 368 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 PRSS42Q7Z5A4 293 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 SYVN1Q86TM6 617 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 MLKLQ8NB16 471 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 KLHL6Q8WZ60 621 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 PLEKHG4BQ96PX9 1271 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 NUDCD1Q96RS6 583 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 RANBP9Q96S59 729 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 NUDT9Q9BW91 350 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 STK33Q9BYT3 514 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 NDST4Q9H3R1 872 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 UCK1Q9HA47 277 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 ASF1BQ9NVP2 202 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 ADAM22Q9P0K1 906 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 VPS18Q9P253 973 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 CNOT6Q9ULM6 557 aaKnown RBP12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 PPIL1Q9Y3C6 166 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 SPG11Q96JI7 2443 aa12.64□□□□□ -0.39
RABGGTA-213ENST00000560127 TCRBV5S1A1TA0A578 114 aa12.63□□□□□ -0.39
RABGGTA-213ENST00000560127 ARHGAP10A1A4S6 786 aa12.63□□□□□ -0.39
RABGGTA-213ENST00000560127 EEF2KO00418 725 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-213ENST00000560127 HNRNPRO43390 633 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-213ENST00000560127 RASSF9O75901 435 aa12.63□□□□□ -0.39
RABGGTA-213ENST00000560127 UBXN7O94888 489 aa12.63□□□□□ -0.39
RABGGTA-213ENST00000560127 PEX11BO96011 259 aa12.63□□□□□ -0.39
RABGGTA-213ENST00000560127 CA9Q16790 459 aa12.63□□□□□ -0.39
RABGGTA-213ENST00000560127 VWA3BQ502W6 1294 aa12.63□□□□□ -0.39
RABGGTA-213ENST00000560127 PWWP2BQ6NUJ5 590 aa12.63□□□□□ -0.39
RABGGTA-213ENST00000560127 USP45Q70EL2 814 aa12.63□□□□□ -0.39
RABGGTA-213ENST00000560127 ZNF765Q7L2R6 523 aa12.63□□□□□ -0.39
RABGGTA-213ENST00000560127 RHOT1Q8IXI2 618 aa12.63□□□□□ -0.39
RABGGTA-213ENST00000560127 AVL9Q8NBF6 648 aa12.63□□□□□ -0.39
RABGGTA-213ENST00000560127 C3orf20Q8ND61 904 aa12.63□□□□□ -0.39
RABGGTA-213ENST00000560127 EXD1Q8NHP7 514 aa12.63□□□□□ -0.39
RABGGTA-213ENST00000560127 PIH1D2Q8WWB5 315 aa12.63□□□□□ -0.39
RABGGTA-213ENST00000560127 PCDHB18PQ96TA0 734 aa12.63□□□□□ -0.39
RABGGTA-213ENST00000560127 RIOK2Q9BVS4 552 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-213ENST00000560127 UNKQ9C0B0 810 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-213ENST00000560127 SCHIP1Q9P0W5 487 aaPredicted RBP12.63□□□□□ -0.39
RABGGTA-213ENST00000560127 ANKUB1A6NFN9 424 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms