RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 ARMC12Q5T9G4 340 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 CLEC6AQ6EIG7 209 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 OR52E8Q6IFG1 317 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 PSAPL1Q6NUJ1 521 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 RETSATQ6NUM9 610 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 METTL2BQ6P1Q9 378 aaKnown RBP8.03□□□□□ -1.12
SMAD3-212ENST00000559937 C16orf59Q7L2K0 433 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 DNAJB7Q7Z6W7 309 aaPredicted RBP8.03□□□□□ -1.12
SMAD3-212ENST00000559937 TMEM150AQ86TG1 271 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 DDX53Q86TM3 631 aaKnown RBP8.03□□□□□ -1.12
SMAD3-212ENST00000559937 GPSM1Q86YR5 675 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 CMTR2Q8IYT2 770 aaKnown RBP8.03□□□□□ -1.12
SMAD3-212ENST00000559937 MIER2Q8N344 545 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 RYBPQ8N488 228 aaPredicted RBP8.03□□□□□ -1.12
SMAD3-212ENST00000559937 MINDY1Q8N5J2 469 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 ICA1LQ8NDH6 482 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 OR56A4Q8NGH8 313 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 GRIN3AQ8TCU5 1115 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 CD200R1Q8TD46 325 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 SH3RF2Q8TEC5 729 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 UCMAQ8WVF2 138 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 EXT2Q93063 718 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 WBP2Q969T9 261 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 FUBP1Q96AE4 644 aaKnown RBP8.03□□□□□ -1.12
SMAD3-212ENST00000559937 ACDQ96AP0 544 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 ZUFSPQ96AP4 578 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 TMA16Q96EY4 203 aaKnown RBP8.03□□□□□ -1.12
SMAD3-212ENST00000559937 ALG14Q96F25 216 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 MYO19Q96H55 970 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 LRGUKQ96M69 825 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 ZNF382Q96SR6 550 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 HOPXQ9BPY8 73 aaPredicted RBP8.03□□□□□ -1.12
SMAD3-212ENST00000559937 LBHD1Q9BQE6 289 aaPredicted RBP8.03□□□□□ -1.12
SMAD3-212ENST00000559937 FEM1AQ9BSK4 669 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 C2orf49Q9BVC5 232 aaPredicted RBP8.03□□□□□ -1.12
SMAD3-212ENST00000559937 RNF38Q9H0F5 515 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 P2RY12Q9H244 342 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 MUC13Q9H3R2 512 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 AKTIPQ9H8T0 292 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 RC3H2Q9HBD1 1191 aaKnown RBP8.03□□□□□ -1.12
SMAD3-212ENST00000559937 SPAG4Q9NPE6 437 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 GID8Q9NWU2 228 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 SPG21Q9NZD8 308 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 CCDC167Q9P0B6 97 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 IL17CQ9P0M4 197 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 DLGAP2Q9P1A6 1054 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 TMEM181Q9P2C4 612 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 CD300AQ9UGN4 299 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 PCTPQ9UKL6 214 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 RAB26Q9ULW5 256 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 DHRS7Q9Y394 339 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 PKP3Q9Y446 797 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 PCDHGC4Q9Y5F7 938 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 DNAJC15Q9Y5T4 150 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 ACTL7AQ9Y615 435 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 SLC30A1Q9Y6M5 507 aa8.03□□□□□ -1.12
SMAD3-212ENST00000559937 TRIOBPQ9H2D6 2365 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 TRBV5-4A0A0C4DH59 114 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 TCRBV3S1A0A5B6 114 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 DYTNA2CJ06 578 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 NPEPPSL1A6NEC2 478 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 E5RI56 91 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 E7ENX8 843 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 PRRG1O14668 218 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 GIPC1O14908 333 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 HTRA2O43464 458 aaPredicted RBP8.02□□□□□ -1.13
SMAD3-212ENST00000559937 SNAP91O60641 907 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 PGLSO95336 258 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 SIX3O95343 332 aaPredicted RBP8.02□□□□□ -1.13
SMAD3-212ENST00000559937 ESRRBO95718 433 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 NPPAP01160 153 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 ALDOCP09972 364 aaKnown RBP8.02□□□□□ -1.13
SMAD3-212ENST00000559937 HSD17B1P14061 328 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 CD1EP15812 388 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 ZNF7P17097 686 aaPredicted RBP8.02□□□□□ -1.13
SMAD3-212ENST00000559937 MZF1P28698 734 aaPredicted RBP8.02□□□□□ -1.13
SMAD3-212ENST00000559937 PPM1AP35813 382 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 CCL23P55773 120 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 SLC7A9P82251 487 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 RHDQ02161 417 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 TWF1Q12792 350 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 BNIP2Q12982 314 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 GRM2Q14416 872 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 PCBP2Q15366 365 aaKnown RBP eCLIP8.02□□□□□ -1.132e-6■■■■□ 23.4
SMAD3-212ENST00000559937 TSNQ15631 228 aaKnown RBP8.02□□□□□ -1.13
SMAD3-212ENST00000559937 PPP1R3AQ16821 1122 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 GEN1Q17RS7 908 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 GRAMD1BQ3KR37 738 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 MPPE1Q53F39 396 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 CTSL3PQ5NE16 218 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 SPOUT1Q5T280 376 aaKnown RBP8.02□□□□□ -1.13
SMAD3-212ENST00000559937 LPCAT4Q643R3 524 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 SLC39A5Q6ZMH5 540 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.02□□□□□ -1.13
SMAD3-212ENST00000559937 RNF165Q6ZSG1 346 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 HTR3DQ70Z44 454 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 RPS27LQ71UM5 84 aaKnown RBP8.02□□□□□ -1.13
SMAD3-212ENST00000559937 ADAMTSL2Q86TH1 951 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 GALNT13Q8IUC8 556 aa8.02□□□□□ -1.13
SMAD3-212ENST00000559937 FUNDC1Q8IVP5 155 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms