RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 ZRANB2O95218 330 aaKnown RBP eCLIP6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 TRBC1P01850 177 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 CKMT2P17540 419 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 TGM2P21980 687 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 CD68P34810 354 aaPredicted RBP6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 HNF1BP35680 557 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 TRIM23P36406 574 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 ETV3P41162 512 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 CD86P42081 329 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 GIPRP48546 466 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 PEX5P50542 639 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 CLDN6P56747 220 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 TFDP2Q14188 446 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 PTK2BQ14289 1009 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 ACOX1Q15067 660 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 PRKD1Q15139 912 aaPredicted RBP6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 PPP2R5EQ16537 467 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 ODF2Q5BJF6 829 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 PRRT3Q5FWE3 981 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 TFDP3Q5H9I0 405 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 LRRC66Q68CR7 880 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 DENND2CQ68D51 928 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 CRTC1Q6UUV9 634 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 DHRS13Q6UX07 377 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 UNQ6494/PRO21346Q6UXR6 183 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 RFLNAQ6ZTI6 216 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 Q6ZVL8 140 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 BBS12Q6ZW61 710 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 USP45Q70EL2 814 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 MARCH9Q86YJ5 346 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 EXD1Q8NHP7 514 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 ALG3Q92685 438 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 TADA1Q96BN2 335 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 HAUS1Q96CS2 278 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 NUS1Q96E22 293 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 DTD2Q96FN9 168 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 PDXPQ96GD0 296 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 RBM41Q96IZ5 413 aaKnown RBP6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 TBATAQ96M53 351 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 LGR4Q9BXB1 951 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 CLPBQ9H078 707 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 PCDH9Q9HC56 1237 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 NLGN3Q9NZ94 848 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 SEPT10Q9P0V9 454 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 PCDHGA1Q9Y5H4 931 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 MYLKQ15746 1914 aa6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 COL27A1Q8IZC6 1860 aaPredicted RBP6.01□□□□□ -1.45
CTDSPL2-204ENST00000558966 ITPR1Q14643 2758 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 NEMP2A6NFY4 417 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 TMEM202A6NGA9 273 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 CAPN8A6NHC0 703 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 PSMD11O00231 422 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 SOD1P00441 154 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 C1SP09871 688 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 CYP2A6P11509 494 aaPredicted RBP6□□□□□ -1.45
CTDSPL2-204ENST00000558966 MYF5P13349 255 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 TSHRP16473 764 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 HOXB4P17483 251 aaPredicted RBP6□□□□□ -1.45
CTDSPL2-204ENST00000558966 ACP1P24666 158 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 NFKBIAP25963 317 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 PTPN3P26045 913 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 CTNNA2P26232 953 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 NR2C2P49116 596 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 HK3P52790 923 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 EPHB1P54762 984 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 KIAA1024LP59773 190 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 PPARDQ03181 441 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 WASHC5Q12768 1159 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 C1orf61Q13536 156 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 ARHGEF7Q14155 803 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 SMAD1Q15797 465 aaKnown RBP6□□□□□ -1.45
CTDSPL2-204ENST00000558966 DEFB133Q30KQ1 61 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 PNCKQ6P2M8 343 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 ENPP7Q6UWV6 458 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 CCNI2Q6ZMN8 369 aaPredicted RBP6□□□□□ -1.45
CTDSPL2-204ENST00000558966 TMPRSS7Q7RTY8 843 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 TECPR1Q7Z6L1 1165 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 KIAA1328Q86T90 577 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 NT5DC3Q86UY8 548 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 LSRQ86X29 649 aaPredicted RBP6□□□□□ -1.45
CTDSPL2-204ENST00000558966 CCDC50Q8IVM0 306 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 RCOR2Q8IZ40 523 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 FAM181AQ8N9Y4 354 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 LPCAT1Q8NF37 534 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 LMX1AQ8TE12 382 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 UBASH3BQ8TF42 649 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 OR1E3Q8WZA6 343 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 TSACCQ96A04 125 aaPredicted RBP6□□□□□ -1.45
CTDSPL2-204ENST00000558966 IMP4Q96G21 291 aaKnown RBP6□□□□□ -1.45
CTDSPL2-204ENST00000558966 APOLD1Q96LR9 279 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 WDR92Q96MX6 357 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 AGAP3Q96P47 875 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 QKIQ96PU8 341 aaKnown RBP eCLIP6□□□□□ -1.453e-9■■■■□ 19.9
CTDSPL2-204ENST00000558966 TRIB3Q96RU7 358 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 LYSMD1Q96S90 227 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 RBM15Q96T37 977 aaKnown RBP eCLIP6□□□□□ -1.453e-6■■□□□ 11.8
CTDSPL2-204ENST00000558966 HEMGNQ9BXL5 484 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 BRD8Q9H0E9 1235 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 FGF22Q9HCT0 170 aa6□□□□□ -1.45
CTDSPL2-204ENST00000558966 HAUS2Q9NVX0 235 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms