RNA–Protein interactions for RNA: ENST00000558943.5

SPG21-208, Transcript of SPG21, maspardin, human

TSL 4

Gene SPG21, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG21-208	ENST00000558943	CDH19	Q9H159	772 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	POFUT1	Q9H488	388 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	ZMAT4	Q9H898	229 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	NMUR1	Q9HB89	426 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	PDE11A	Q9HCR9	933 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	INTS13	Q9NVM9	706 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	OXSM	Q9NWU1	459 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	SPAST	Q9UBP0	616 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	EXOC7	Q9UPT5	735 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	ENTPD4	Q9Y227	616 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	TNFRSF18	Q9Y5U5	241 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	CRYBG3	Q68DQ2	2970 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	TMEM131	Q92545	1883 aa		4.86	□□□□□ -1.63
SPG21-208	ENST00000558943	KNL1	Q8NG31	2342 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	ZFHX3	Q15911	3703 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	GOLGA8IP	A6NC78	632 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	GOLGA8J	A6NMD2	632 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943		A6NNZ2	444 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	TTC34	A8MYJ7	566 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	TCP11X1	B4DZS4	312 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943		D6RAR5	112 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	RNASET2	O00584	256 aa	Known RBP	4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	CASC3	O15234	703 aa	Known RBP	4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	PLRG1	O43660	514 aa	Known RBP	4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	KIF20A	O95235	890 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	APOL3	O95236	402 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	MOCS3	O95396	460 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	LDLR	P01130	860 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	SRPRA	P08240	638 aa	Known RBP	4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	HK1	P19367	917 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	TRIM21	P19474	475 aa	Known RBP	4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	NR1D1	P20393	614 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	PDC	P20941	246 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	HNRNPA2B1	P22626	353 aa	Known RBP	4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	XPA	P23025	273 aa	Predicted RBP	4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	HOXD9	P28356	352 aa	Predicted RBP	4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	CD70	P32970	193 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	CSK	P41240	450 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	LEPR	P48357	1165 aa	Known RBP	4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	GZMK	P49863	264 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	SLC12A3	P55017	1021 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	NRG3	P56975	720 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	CLDN2	P57739	230 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	TRPC3	Q13507	836 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	ELAVL3	Q14576	367 aa	Known RBP	4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	NEK5	Q6P3R8	708 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	PAQR9	Q6ZVX9	377 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	TMPRSS9	Q7Z410	1059 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	PTAR1	Q7Z6K3	402 aa	Predicted RBP	4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	PARG	Q86W56	976 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	GPBP1	Q86WP2	473 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	VRK3	Q8IV63	474 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	ARHGEF19	Q8IW93	802 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	ZC3H3	Q8IXZ2	948 aa	Known RBP	4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	SLC35F3	Q8IY50	421 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	CACNA2D3	Q8IZS8	1091 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	SYCP3	Q8IZU3	236 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	MMP21	Q8N119	569 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	SDR16C5	Q8N3Y7	309 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	PIK3C3	Q8NEB9	887 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	OR5B17	Q8NGF7	314 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	OR5M3	Q8NGP4	307 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	SLC2A14	Q8TDB8	520 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	JAKMIP2	Q96AA8	810 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	TTC17	Q96AE7	1141 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	SLC45A3	Q96JT2	553 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	TAAR9	Q96RI9	348 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	SMO	Q99835	787 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	CPEB1	Q9BZB8	566 aa	Known RBP	4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	LRRN3	Q9H3W5	708 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	CAAP1	Q9H8G2	361 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	GPN2	Q9H9Y4	310 aa	Predicted RBP	4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	PDRG1	Q9NUG6	133 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	CLIC5	Q9NZA1	410 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	PTGFRN	Q9P2B2	879 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	ZNHIT2	Q9UHR6	403 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	SLCO3A1	Q9UIG8	710 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	ERRFI1	Q9UJM3	462 aa	Predicted RBP	4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	NOL7	Q9UMY1	257 aa	Known RBP	4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	ERVW-1	Q9UQF0	538 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	NME7	Q9Y5B8	376 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	OBSL1	O75147	1896 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	DENND4C	Q5VZ89	1909 aa		4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	SPTBN1	Q01082	2364 aa	Known RBP	4.85	□□□□□ -1.63
SPG21-208	ENST00000558943	CSMD1	Q96PZ7	3565 aa		4.84	□□□□□ -1.63
SPG21-208	ENST00000558943	ICE1	Q9Y2F5	2266 aa		4.84	□□□□□ -1.63
SPG21-208	ENST00000558943	SPTY2D1-AS1	A0A0U1RR47	76 aa		4.84	□□□□□ -1.63
SPG21-208	ENST00000558943	HEATR9	A2RTY3	570 aa		4.84	□□□□□ -1.63
SPG21-208	ENST00000558943	TYW5	A2RUC4	315 aa	Known RBP	4.84	□□□□□ -1.63
SPG21-208	ENST00000558943	VWA3A	A6NCI4	1184 aa		4.84	□□□□□ -1.63
SPG21-208	ENST00000558943	ZNF233	A6NK53	670 aa		4.84	□□□□□ -1.63
SPG21-208	ENST00000558943		K7EM74	188 aa		4.84	□□□□□ -1.63
SPG21-208	ENST00000558943		M0QYT0	321 aa		4.84	□□□□□ -1.63
SPG21-208	ENST00000558943	YY2	O15391	372 aa		4.84	□□□□□ -1.63
SPG21-208	ENST00000558943	PFKFB2	O60825	505 aa		4.84	□□□□□ -1.63
SPG21-208	ENST00000558943	TBL1X	O60907	577 aa		4.84	□□□□□ -1.63
SPG21-208	ENST00000558943	BEST1	O76090	585 aa		4.84	□□□□□ -1.63
SPG21-208	ENST00000558943	PCDH8	O95206	1070 aa		4.84	□□□□□ -1.63
SPG21-208	ENST00000558943	NADK	O95544	446 aa	Predicted RBP	4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms