RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 ARHGAP9Q9BRR9 750 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 ZSCAN5AQ9BUG6 496 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 BRD8Q9H0E9 1235 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 CARD9Q9H257 536 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 SARS2Q9NP81 518 aaKnown RBP14.49□□□□□ -0.09
SHMT2-235ENST00000557740 RAD18Q9NS91 495 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 DDX56Q9NY93 547 aaKnown RBP14.49□□□□□ -0.09
SHMT2-235ENST00000557740 TMEM9Q9P0T7 183 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 TBC1D29Q9UFV1 150 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 PCDHGA4Q9Y5G9 962 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 PIEZO2Q9H5I5 2752 aa14.49□□□□□ -0.09
SHMT2-235ENST00000557740 KIR2DS5A0A0G2JLQ3 304 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 A0A0G2JNG1 304 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-235ENST00000557740 KIR2DS3K7RE56 304 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 GRID2O43424 1007 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 SPOPO43791 374 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 EML2O95834 649 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 ITGB2P05107 769 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 PIRTP0C851 137 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 FGF3P11487 239 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-235ENST00000557740 SLC1A1P43005 524 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 MAPK9P45984 424 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 DCDC1P59894 354 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 CDK18Q07002 472 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 KIR2DS5Q14953 304 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 SLC14A2Q15849 920 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 SNAP47Q5SQN1 464 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-235ENST00000557740 CCDC70Q6NSX1 233 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 TMEM71Q6P5X7 295 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 IYDQ6PHW0 289 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 RHOT1Q8IXI2 618 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 JPH3Q8WXH2 748 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-235ENST00000557740 RNF25Q96BH1 459 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-235ENST00000557740 OLFM3Q96PB7 478 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 TRIB3Q96RU7 358 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 CHP1Q99653 195 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 DDA1Q9BW61 102 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 GPR63Q9BZJ6 419 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 SLC25A51Q9H1U9 297 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 OR2AG1Q9H205 316 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 TSPY26PQ9H489 355 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 OSGEPL1Q9H4B0 414 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 SLC39A1Q9NY26 324 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 SHOC2Q9UQ13 582 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 ZNF711Q9Y462 761 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 PCDHGA3Q9Y5H0 932 aa14.48□□□□□ -0.09
SHMT2-235ENST00000557740 PCYT1BQ9Y5K3 369 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-235ENST00000557740 SCN8AQ9UQD0 1980 aa14.47□□□□□ -0.09
SHMT2-235ENST00000557740 A0A0A6YYK5 440 aaPredicted RBP14.47□□□□□ -0.09
SHMT2-235ENST00000557740 EFCAB7A8K855 629 aa14.47□□□□□ -0.09
SHMT2-235ENST00000557740 GPR89AB7ZAQ6 455 aa14.47□□□□□ -0.09
SHMT2-235ENST00000557740 B8ZZF3 427 aa14.47□□□□□ -0.09
SHMT2-235ENST00000557740 J3QKU1 62 aa14.47□□□□□ -0.09
SHMT2-235ENST00000557740 NUAK1O60285 661 aa14.47□□□□□ -0.09
SHMT2-235ENST00000557740 SLC25A14O95258 325 aaPredicted RBP14.47□□□□□ -0.09
SHMT2-235ENST00000557740 GPR89BP0CG08 455 aa14.47□□□□□ -0.09
SHMT2-235ENST00000557740 F3P13726 295 aa14.47□□□□□ -0.09
SHMT2-235ENST00000557740 EPHA4P54764 986 aa14.47□□□□□ -0.09
SHMT2-235ENST00000557740 RAB15P59190 212 aa14.47□□□□□ -0.09
SHMT2-235ENST00000557740 CRTC3Q6UUV7 619 aa14.47□□□□□ -0.09
SHMT2-235ENST00000557740 BZW1Q7L1Q6 419 aaKnown RBP14.47□□□□□ -0.09
SHMT2-235ENST00000557740 CNGA4Q8IV77 575 aa14.47□□□□□ -0.09
SHMT2-235ENST00000557740 TRAM1L1Q8N609 369 aa14.47□□□□□ -0.09
SHMT2-235ENST00000557740 GPR26Q8NDV2 337 aa14.47□□□□□ -0.09
SHMT2-235ENST00000557740 EXTL1Q92935 676 aa14.47□□□□□ -0.09
SHMT2-235ENST00000557740 PMEPA1Q969W9 287 aa14.47□□□□□ -0.09
SHMT2-235ENST00000557740 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.47□□□□□ -0.09
SHMT2-235ENST00000557740 ASPSCR1Q9BZE9 553 aa14.47□□□□□ -0.09
SHMT2-235ENST00000557740 MAGEE1Q9HCI5 957 aa14.47□□□□□ -0.09
SHMT2-235ENST00000557740 ARFGAP3Q9NP61 516 aa14.47□□□□□ -0.09
SHMT2-235ENST00000557740 ATXN10Q9UBB4 475 aa14.47□□□□□ -0.09
SHMT2-235ENST00000557740 B3GALT1Q9Y5Z6 326 aa14.47□□□□□ -0.09
SHMT2-235ENST00000557740 A6NCN8 305 aa14.46□□□□□ -0.09
SHMT2-235ENST00000557740 OR5K4A6NMS3 321 aa14.46□□□□□ -0.09
SHMT2-235ENST00000557740 B4E171 279 aa14.46□□□□□ -0.09
SHMT2-235ENST00000557740 ZIC2O95409 532 aaPredicted RBP14.46□□□□□ -0.09
SHMT2-235ENST00000557740 NDST3O95803 873 aa14.46□□□□□ -0.09
SHMT2-235ENST00000557740 ZNF8P17098 575 aaPredicted RBP14.46□□□□□ -0.09
SHMT2-235ENST00000557740 TSPAN7P41732 249 aa14.46□□□□□ -0.09
SHMT2-235ENST00000557740 TNNT3P45378 269 aaPredicted RBP14.46□□□□□ -0.09
SHMT2-235ENST00000557740 TFDP2Q14188 446 aa14.46□□□□□ -0.09
SHMT2-235ENST00000557740 INSCQ1MX18 579 aa14.46□□□□□ -0.09
SHMT2-235ENST00000557740 PLA2G4EQ3MJ16 856 aa14.46□□□□□ -0.09
SHMT2-235ENST00000557740 FAM182AQ5T1J6 154 aa14.46□□□□□ -0.09
SHMT2-235ENST00000557740 ZNF648Q5T619 568 aaPredicted RBP14.46□□□□□ -0.09
SHMT2-235ENST00000557740 DCAF12Q5T6F0 453 aa14.46□□□□□ -0.09
SHMT2-235ENST00000557740 PDPK2PQ6A1A2 396 aa14.46□□□□□ -0.09
SHMT2-235ENST00000557740 WDR74Q6RFH5 385 aaPredicted RBP14.46□□□□□ -0.09
SHMT2-235ENST00000557740 XKR5Q6UX68 686 aa14.46□□□□□ -0.09
SHMT2-235ENST00000557740 MFSD7Q6UXD7 560 aa14.46□□□□□ -0.09
SHMT2-235ENST00000557740 B4GALNT4Q76KP1 1039 aa14.46□□□□□ -0.09
SHMT2-235ENST00000557740 IL22RA1Q8N6P7 574 aa14.46□□□□□ -0.09
SHMT2-235ENST00000557740 NCSTNQ92542 709 aa14.46□□□□□ -0.09
SHMT2-235ENST00000557740 GLYATL1Q969I3 302 aa14.46□□□□□ -0.09
SHMT2-235ENST00000557740 EID2BQ96D98 161 aa14.46□□□□□ -0.09
SHMT2-235ENST00000557740 TEFMQ96QE5 360 aaKnown RBP14.46□□□□□ -0.09
SHMT2-235ENST00000557740 SRPK1Q96SB4 655 aaKnown RBP14.46□□□□□ -0.09
SHMT2-235ENST00000557740 EPB41L1Q9H4G0 881 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms