RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 TMEM165Q9HC07 324 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 ABCC13Q9NSE7 274 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 RIC8BQ9NVN3 520 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 FNIP2Q9P278 1114 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 PCDHGA11Q9Y5H2 935 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 TRIP12Q14669 1992 aaPredicted RBP11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 C1orf232A0A0U1RR37 186 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 C16orf96A6NNT2 1141 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 SUPT3HB4E1H0 165 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 DYNC1LI2O43237 492 aaPredicted RBP11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 MSI1O43347 362 aaKnown RBP11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 MOCS2O96007 188 aaPredicted RBP11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 PEX11BO96011 259 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 CHEK2O96017 543 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 ENO2P09104 434 aaPredicted RBP11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 PRR35P0CG20 571 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 HRH2P25021 359 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 MAGEA10P43363 369 aaPredicted RBP11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 POLR2JP52435 117 aaKnown RBP11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 DSC2Q02487 901 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 GNA12Q03113 381 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 KCNC4Q03721 635 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 CBX2Q14781 532 aaPredicted RBP11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 CRY1Q16526 586 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 SIRPB2Q5JXA9 342 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 MARC1Q5VT66 337 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 EGFLAMQ63HQ2 1017 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 ANKS6Q68DC2 871 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 MOB2Q70IA6 237 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 THAP5Q7Z6K1 395 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 ZBTB46Q86UZ6 589 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 FBXO39Q8N4B4 442 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 PDZD8Q8NEN9 1154 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 BPIFB6Q8NFQ5 453 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 ITPKCQ96DU7 683 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 TBATAQ96M53 351 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 BEGAINQ9BUH8 593 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 NUSAP1Q9BXS6 441 aaKnown RBP11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 RAD21L1Q9H4I0 556 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 SEMA4BQ9NPR2 832 aaPredicted RBP11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 INIPQ9NRY2 104 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 MAGEL2Q9UJ55 1249 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 CORINQ9Y5Q5 1042 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 H0Y858 1186 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 CD3EAPO15446 510 aaKnown RBP11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 B4GAT1O43505 415 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 SYNCRIPO60506 623 aaKnown RBP11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 SNX2O60749 519 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 KERAO60938 352 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 TULP3O75386 442 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 C1RP00736 705 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 NPPAP01160 153 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 THRBP10828 461 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 SHMT2P34897 504 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 ZFP36L2P47974 494 aaKnown RBP11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 CRYBB1P53674 252 aaPredicted RBP11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 UFM1P61960 85 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 TIAL1Q01085 375 aaKnown RBP eCLIP11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 EMX2Q04743 252 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 ITGADQ13349 1161 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 BFSP2Q13515 415 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 FXNQ16595 210 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 GLYATQ6IB77 296 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 TMEM214Q6NUQ4 689 aaKnown RBP11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 C14orf80Q86SX3 495 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 RIMKLAQ8IXN7 391 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 CLEC4FQ8N1N0 589 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 STAG3L4Q8TBR4 150 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 ZC3H15Q8WU90 426 aaKnown RBP11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 TEX37Q96LM6 180 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 LRRC3Q9BY71 257 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 BRINP2Q9C0B6 783 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 LHPPQ9H008 270 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 ADNPQ9H2P0 1102 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 SMOC2Q9H3U7 446 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 HPS4Q9NQG7 708 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 TLR9Q9NR96 1032 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 RNF112Q9ULX5 631 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 TIMM22Q9Y584 194 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 KCTD3Q9Y597 815 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 HS3ST4Q9Y661 456 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 WASH4PA8MWX3 477 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 LDB2O43679 373 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 GOT2P00505 430 aaKnown RBP11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 F2P00734 622 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 THP07101 528 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 MMP2P08253 660 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 GSTM2P28161 218 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 ECT2LQ008S8 904 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 GSTM4Q03013 218 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 SLC10A7Q0GE19 358 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 TIGD2Q4W5G0 525 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 PYCR3Q53H96 274 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 ARTNQ5T4W7 220 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 IQSEC1Q6DN90 963 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 XAF1Q6GPH4 301 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 C8orf59Q8N0T1 100 aaPredicted RBP11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 GPR150Q8NGU9 434 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 SCAMP5Q8TAC9 235 aa11.74□□□□□ -0.53
VIPAS39-211ENST00000557658 GTF3C2Q8WUA4 911 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms