RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 RIC8BQ9NVN3 520 aa16.19■□□□□ 0.18
SHMT2-232ENST00000557487 COQ6Q9Y2Z9 468 aa16.19■□□□□ 0.18
SHMT2-232ENST00000557487 PCDHB3Q9Y5E6 796 aa16.19■□□□□ 0.18
SHMT2-232ENST00000557487 PCNTO95613 3336 aa16.19■□□□□ 0.18
SHMT2-232ENST00000557487 LOC285095A0A1B0GVY8 99 aa16.19■□□□□ 0.18
SHMT2-232ENST00000557487 FAM234BA2RU67 622 aa16.19■□□□□ 0.18
SHMT2-232ENST00000557487 SLC22A3O75751 556 aa16.19■□□□□ 0.18
SHMT2-232ENST00000557487 BCL10O95999 233 aa16.19■□□□□ 0.18
SHMT2-232ENST00000557487 EPOP01588 193 aa16.19■□□□□ 0.18
SHMT2-232ENST00000557487 HLA-DPA1P20036 260 aa16.19■□□□□ 0.18
SHMT2-232ENST00000557487 ALDH3A2P51648 485 aa16.19■□□□□ 0.18
SHMT2-232ENST00000557487 KCNC4Q03721 635 aa16.19■□□□□ 0.18
SHMT2-232ENST00000557487 PFKFB4Q16877 469 aa16.19■□□□□ 0.18
SHMT2-232ENST00000557487 FGD3Q5JSP0 725 aa16.19■□□□□ 0.18
SHMT2-232ENST00000557487 GRAMD4Q6IC98 578 aa16.19■□□□□ 0.18
SHMT2-232ENST00000557487 NIPAL1Q6NVV3 410 aa16.19■□□□□ 0.18
SHMT2-232ENST00000557487 DPP10Q8N608 796 aa16.19■□□□□ 0.18
SHMT2-232ENST00000557487 SLC30A3Q99726 388 aa16.19■□□□□ 0.18
SHMT2-232ENST00000557487 AARSD1Q9BTE6 412 aaKnown RBP16.19■□□□□ 0.18
SHMT2-232ENST00000557487 HPS4Q9NQG7 708 aa16.19■□□□□ 0.18
SHMT2-232ENST00000557487 CPA4Q9UI42 421 aa16.19■□□□□ 0.18
SHMT2-232ENST00000557487 PSME2Q9UL46 239 aa16.19■□□□□ 0.18
SHMT2-232ENST00000557487 WDR37Q9Y2I8 494 aa16.19■□□□□ 0.18
SHMT2-232ENST00000557487 ZNF711Q9Y462 761 aa16.19■□□□□ 0.18
SHMT2-232ENST00000557487 TMEM221A6NGB7 291 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 HAS3O00219 553 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 CD3EAPO15446 510 aaKnown RBP16.18■□□□□ 0.18
SHMT2-232ENST00000557487 LDB2O43679 373 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 ABCB7O75027 752 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 COQ9O75208 318 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 KATNA1O75449 491 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 RPP40O75818 363 aaKnown RBP16.18■□□□□ 0.18
SHMT2-232ENST00000557487 ZBTB11O95625 1053 aaPredicted RBP16.18■□□□□ 0.18
SHMT2-232ENST00000557487 FGF1P05230 155 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 RPS17P08708 135 aaKnown RBP16.18■□□□□ 0.18
SHMT2-232ENST00000557487 UROSP10746 265 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 BDNFP23560 247 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 PSEN2P49810 448 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 ARSDP51689 593 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 CLCNKBP51801 687 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 GABARAPL2P60520 117 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 RELAQ04206 551 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 OR4D1Q15615 310 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 XKR7Q5GH72 579 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 NOMO2Q5JPE7 1267 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 SIRPB2Q5JXA9 342 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 TTC23Q5W5X9 447 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 PIM3Q86V86 326 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 HID1Q8IV36 788 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 RIMKLAQ8IXN7 391 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 FBXO39Q8N4B4 442 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 BIRC7Q96CA5 298 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 AURKBQ96GD4 344 aaPredicted RBP16.18■□□□□ 0.18
SHMT2-232ENST00000557487 NSMCE2Q96MF7 247 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 TMEM209Q96SK2 561 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 CHID1Q9BWS9 393 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 NDFIP2Q9NV92 336 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 MARCH4Q9P2E8 410 aaPredicted RBP16.18■□□□□ 0.18
SHMT2-232ENST00000557487 BLOC1S6Q9UL45 172 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 TIMM13Q9Y5L4 95 aaPredicted RBP16.18■□□□□ 0.18
SHMT2-232ENST00000557487 HS3ST4Q9Y661 456 aa16.18■□□□□ 0.18
SHMT2-232ENST00000557487 LCHNA4D1U4 455 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 SNX2O60749 519 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 SNAP29O95721 258 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 MMP2P08253 660 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 LINC00032P0C843 101 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 HOXB6P17509 224 aaKnown RBP16.17■□□□□ 0.18
SHMT2-232ENST00000557487 GSTM2P28161 218 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 POLR2JP52435 117 aaKnown RBP16.17■□□□□ 0.18
SHMT2-232ENST00000557487 FOXA1P55317 472 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 ERVK-8P63133 956 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 ITKQ08881 620 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 TOP3AQ13472 1001 aaPredicted RBP16.17■□□□□ 0.18
SHMT2-232ENST00000557487 DAG1Q14118 895 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 GRB14Q14449 540 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 SKIV2LQ15477 1246 aaKnown RBP16.17■□□□□ 0.18
SHMT2-232ENST00000557487 TGFBIQ15582 683 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 TYSND1Q2T9J0 566 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 MSANTD2Q6P1R3 559 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 ZNF549Q6P9A3 640 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 OFCC1Q8IZS5 231 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 DNAJB14Q8TBM8 379 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 HDAC2Q92769 488 aaKnown RBP16.17■□□□□ 0.18
SHMT2-232ENST00000557487 POP5Q969H6 163 aaKnown RBP16.17■□□□□ 0.18
SHMT2-232ENST00000557487 PKMYT1Q99640 499 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 RTP3Q9BQQ7 232 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 NOL6Q9H6R4 1146 aaKnown RBP16.17■□□□□ 0.18
SHMT2-232ENST00000557487 SP110Q9HB58 689 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 TMEM248Q9NWD8 314 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 TDRKHQ9Y2W6 561 aaKnown RBP16.17■□□□□ 0.18
SHMT2-232ENST00000557487 GIT1Q9Y2X7 761 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 NYNRINQ9P2P1 1898 aaKnown RBP16.17■□□□□ 0.18
SHMT2-232ENST00000557487 CROCCQ5TZA2 2017 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 FUOMA2VDF0 154 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 KLK8O60259 260 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 SOAT2O75908 522 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 CLPXO76031 633 aa16.17■□□□□ 0.18
SHMT2-232ENST00000557487 SIX3O95343 332 aaPredicted RBP16.17■□□□□ 0.18
SHMT2-232ENST00000557487 ATXN1LP0C7T5 689 aaKnown RBP16.17■□□□□ 0.18
SHMT2-232ENST00000557487 MTHFD1P11586 935 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms