RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 USP41Q3LFD5 358 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 TIGD2Q4W5G0 525 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 PRSS55Q6UWB4 352 aaPredicted RBP17.6■□□□□ 0.41
XRCC3-218ENST00000557439 SLC24A5Q71RS6 500 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 C16orf59Q7L2K0 433 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 TAS1R1Q7RTX1 841 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 EEF1AKMT1Q8WVE0 214 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 FATE1Q969F0 183 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 EFHD1Q9BUP0 239 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 ETAA1Q9NY74 926 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 ABCD2Q9UBJ2 740 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 EIF2B4Q9UI10 523 aaKnown RBP17.6■□□□□ 0.41
XRCC3-218ENST00000557439 GPR45Q9Y5Y3 372 aa17.6■□□□□ 0.41
XRCC3-218ENST00000557439 STAMBPO95630 424 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 GNA12Q03113 381 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 LAMB3Q13751 1172 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 NFYCQ13952 458 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 MAP7Q14244 749 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 RBBP7Q16576 425 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 TYSND1Q2T9J0 566 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 RTP2Q5QGT7 225 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 CCSAPQ6IQ19 270 aaPredicted RBP17.59■□□□□ 0.41
XRCC3-218ENST00000557439 DENND1CQ8IV53 801 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 OR52B6Q8NGF0 335 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 STAG3L4Q8TBR4 150 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 BIRC8Q96P09 236 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 CCDC68Q9H2F9 335 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 GKN1Q9NS71 199 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 CCM2LQ9NUG4 571 aaPredicted RBP17.59■□□□□ 0.41
XRCC3-218ENST00000557439 INTS7Q9NVH2 962 aaKnown RBP17.59■□□□□ 0.41
XRCC3-218ENST00000557439 TAS2R13Q9NYV9 303 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 OAZ3Q9UMX2 235 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 DMTF1Q9Y222 760 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 H3BNH8 94 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 CBX4O00257 560 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 PENKP01210 267 aaPredicted RBP17.59■□□□□ 0.41
XRCC3-218ENST00000557439 PRKAR2AP13861 404 aaKnown RBP17.59■□□□□ 0.41
XRCC3-218ENST00000557439 RPL17P18621 184 aaKnown RBP17.59■□□□□ 0.41
XRCC3-218ENST00000557439 CDH2P19022 906 aaPredicted RBP17.59■□□□□ 0.41
XRCC3-218ENST00000557439 ZFP36L2P47974 494 aaKnown RBP17.59■□□□□ 0.41
XRCC3-218ENST00000557439 ANKS6Q68DC2 871 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 BLOC1S3Q6QNY0 202 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 CPNE9Q8IYJ1 553 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 OFCC1Q8IZS5 231 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 CDYL2Q8N8U2 506 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 RHEBL1Q8TAI7 183 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 FBXL20Q96IG2 436 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 TCF12Q99081 682 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 CINPQ9BW66 212 aaPredicted RBP17.59■□□□□ 0.41
XRCC3-218ENST00000557439 NLE1Q9NVX2 485 aaPredicted RBP17.59■□□□□ 0.41
XRCC3-218ENST00000557439 PLK2Q9NYY3 685 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 IL37Q9NZH6 218 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 HSFX1Q9UBD0 423 aa17.59■□□□□ 0.41
XRCC3-218ENST00000557439 hCG_2014768A0A024R1R8 64 aa17.58■□□□□ 0.41
XRCC3-218ENST00000557439 ADAM12O43184 909 aa17.58■□□□□ 0.41
XRCC3-218ENST00000557439 OR4F21O95013 312 aa17.58■□□□□ 0.41
XRCC3-218ENST00000557439 IL12AP29459 219 aa17.58■□□□□ 0.41
XRCC3-218ENST00000557439 GSK3BP49841 420 aa17.58■□□□□ 0.41
XRCC3-218ENST00000557439 CYP51A1Q16850 503 aa17.58■□□□□ 0.41
XRCC3-218ENST00000557439 WBP2Q969T9 261 aa17.58■□□□□ 0.41
XRCC3-218ENST00000557439 DUS3LQ96G46 650 aaKnown RBP17.58■□□□□ 0.41
XRCC3-218ENST00000557439 RMND5BQ96G75 393 aaPredicted RBP17.58■□□□□ 0.41
XRCC3-218ENST00000557439 PLEKHG4BQ96PX9 1271 aa17.58■□□□□ 0.41
XRCC3-218ENST00000557439 EVLQ9UI08 416 aaPredicted RBP17.58■□□□□ 0.41
XRCC3-218ENST00000557439 ANKRD36A6QL64 1941 aa17.58■□□□□ 0.4
XRCC3-218ENST00000557439 FAM92AA1XBS5 289 aa17.58■□□□□ 0.4
XRCC3-218ENST00000557439 CLGNO14967 610 aa17.58■□□□□ 0.4
XRCC3-218ENST00000557439 CYBBP04839 570 aa17.58■□□□□ 0.4
XRCC3-218ENST00000557439 IRF1P10914 325 aa17.58■□□□□ 0.4
XRCC3-218ENST00000557439 ATF6P18850 670 aa17.58■□□□□ 0.4
XRCC3-218ENST00000557439 OGNP20774 298 aaKnown RBP17.58■□□□□ 0.4
XRCC3-218ENST00000557439 RPS6KA3P51812 740 aa17.58■□□□□ 0.4
XRCC3-218ENST00000557439 YBEYP58557 167 aaPredicted RBP17.58■□□□□ 0.4
XRCC3-218ENST00000557439 RAD51Q06609 339 aa17.58■□□□□ 0.4
XRCC3-218ENST00000557439 ZRANB3Q5FWF4 1079 aa17.58■□□□□ 0.4
XRCC3-218ENST00000557439 PPP4R4Q6NUP7 873 aa17.58■□□□□ 0.4
XRCC3-218ENST00000557439 KIAA2013Q8IYS2 634 aa17.58■□□□□ 0.4
XRCC3-218ENST00000557439 ADGRG5Q8IZF4 528 aa17.58■□□□□ 0.4
XRCC3-218ENST00000557439 ZNF786Q8N393 782 aa17.58■□□□□ 0.4
XRCC3-218ENST00000557439 ANKFN1Q8N957 763 aa17.58■□□□□ 0.4
XRCC3-218ENST00000557439 TMEM125Q96AQ2 219 aa17.58■□□□□ 0.4
XRCC3-218ENST00000557439 SEPHS2Q99611 448 aa17.58■□□□□ 0.4
XRCC3-218ENST00000557439 HGH1Q9BTY7 390 aa17.58■□□□□ 0.4
XRCC3-218ENST00000557439 MYRFQ9Y2G1 1151 aa17.58■□□□□ 0.4
XRCC3-218ENST00000557439 PCDHA9Q9Y5H5 950 aa17.58■□□□□ 0.4
XRCC3-218ENST00000557439 OAS3Q9Y6K5 1087 aaKnown RBP17.58■□□□□ 0.4
XRCC3-218ENST00000557439 RNF103-CHMP3A0A140T963 221 aa17.57■□□□□ 0.4
XRCC3-218ENST00000557439 PRAMEF12O95522 483 aa17.57■□□□□ 0.4
XRCC3-218ENST00000557439 RPS17P08708 135 aaKnown RBP17.57■□□□□ 0.4
XRCC3-218ENST00000557439 BMP2P12643 396 aa17.57■□□□□ 0.4
XRCC3-218ENST00000557439 MC4RP32245 332 aa17.57■□□□□ 0.4
XRCC3-218ENST00000557439 HTR6P50406 440 aa17.57■□□□□ 0.4
XRCC3-218ENST00000557439 TNK2Q07912 1038 aa17.57■□□□□ 0.4
XRCC3-218ENST00000557439 CTSL3PQ5NE16 218 aa17.57■□□□□ 0.4
XRCC3-218ENST00000557439 TRAF7Q6Q0C0 670 aa17.57■□□□□ 0.4
XRCC3-218ENST00000557439 MINDY1Q8N5J2 469 aa17.57■□□□□ 0.4
XRCC3-218ENST00000557439 TFAP2CQ92754 450 aa17.57■□□□□ 0.4
XRCC3-218ENST00000557439 HOPXQ9BPY8 73 aaPredicted RBP17.57■□□□□ 0.4
XRCC3-218ENST00000557439 MGME1Q9BQP7 344 aa17.57■□□□□ 0.4
XRCC3-218ENST00000557439 DERL2Q9GZP9 239 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms