RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 RPS6KL1Q9Y6S9 549 aa13.93□□□□□ -0.18
SLIRP-210ENST00000557431 SPTBN1Q01082 2364 aaKnown RBP13.92□□□□□ -0.18
SLIRP-210ENST00000557431 POLR1CO15160 346 aaPredicted RBP13.92□□□□□ -0.18
SLIRP-210ENST00000557431 F3P13726 295 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 ZNF8P17098 575 aaPredicted RBP13.92□□□□□ -0.18
SLIRP-210ENST00000557431 DLSTP36957 453 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 STAT5AP42229 794 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 LEPRP48357 1165 aaKnown RBP13.92□□□□□ -0.18
SLIRP-210ENST00000557431 SPINT3P49223 89 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 MLLT10P55197 1068 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 TYRO3Q06418 890 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 ABHD18Q0P651 414 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 GALNT2Q10471 571 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 LRP8Q14114 963 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 DPYSL3Q14195 570 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 ERV3-1Q14264 604 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 QPCTQ16769 361 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 ANO6Q4KMQ2 910 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 LACTB2Q53H82 288 aaPredicted RBP13.92□□□□□ -0.18
SLIRP-210ENST00000557431 WDR74Q6RFH5 385 aaPredicted RBP13.92□□□□□ -0.18
SLIRP-210ENST00000557431 LYSMD3Q7Z3D4 306 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 SLC9B2Q86UD5 537 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 LURAP1LQ8IV03 231 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 NDUFAF2Q8N183 169 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 GALNT6Q8NCL4 622 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 TEKT4Q8WW24 435 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 MAML1Q92585 1016 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 GBP4Q96PP9 640 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 PLEKHG4BQ96PX9 1271 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 NUP85Q9BW27 656 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 CEP41Q9BYV8 373 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 ISCUQ9H1K1 167 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 STN1Q9H668 368 aaKnown RBP13.92□□□□□ -0.18
SLIRP-210ENST00000557431 MRPL47Q9HD33 250 aaKnown RBP13.92□□□□□ -0.18
SLIRP-210ENST00000557431 FBXO8Q9NRD0 319 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 KLC4Q9NSK0 619 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 VPS18Q9P253 973 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 CPNE7Q9UBL6 633 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 SLC23A2Q9UGH3 650 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 TUBD1Q9UJT1 453 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 CROTQ9UKG9 612 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 DNAJC16Q9Y2G8 782 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 SLC30A1Q9Y6M5 507 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 FER1L5A0AVI2 2057 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 MDC1Q14676 2089 aaKnown RBP13.92□□□□□ -0.18
SLIRP-210ENST00000557431 PIKFYVEQ9Y2I7 2098 aa13.92□□□□□ -0.18
SLIRP-210ENST00000557431 BLACEA4D250 179 aa13.91□□□□□ -0.18
SLIRP-210ENST00000557431 GRID2O43424 1007 aa13.91□□□□□ -0.18
SLIRP-210ENST00000557431 KIF1CO43896 1103 aaKnown RBP13.91□□□□□ -0.18
SLIRP-210ENST00000557431 MTX2O75431 263 aa13.91□□□□□ -0.18
SLIRP-210ENST00000557431 MMP2P08253 660 aa13.91□□□□□ -0.18
SLIRP-210ENST00000557431 CD86P42081 329 aa13.91□□□□□ -0.18
SLIRP-210ENST00000557431 ZNF165P49910 485 aa13.91□□□□□ -0.18
SLIRP-210ENST00000557431 ARSEP51690 589 aa13.91□□□□□ -0.18
SLIRP-210ENST00000557431 SLC10A2Q12908 348 aaPredicted RBP13.91□□□□□ -0.18
SLIRP-210ENST00000557431 CCDC122Q5T0U0 273 aa13.91□□□□□ -0.18
SLIRP-210ENST00000557431 ALG1LQ6GMV1 187 aa13.91□□□□□ -0.18
SLIRP-210ENST00000557431 APOBEC4Q8WW27 367 aaKnown RBP13.91□□□□□ -0.18
SLIRP-210ENST00000557431 RSC1A1Q92681 617 aa13.91□□□□□ -0.18
SLIRP-210ENST00000557431 EID2BQ96D98 161 aa13.91□□□□□ -0.18
SLIRP-210ENST00000557431 TGM7Q96PF1 710 aa13.91□□□□□ -0.18
SLIRP-210ENST00000557431 RUFY1Q96T51 708 aa13.91□□□□□ -0.18
SLIRP-210ENST00000557431 ULBP3Q9BZM4 244 aa13.91□□□□□ -0.18
SLIRP-210ENST00000557431 OR2AG1Q9H205 316 aa13.91□□□□□ -0.18
SLIRP-210ENST00000557431 FAM83DQ9H4H8 585 aa13.91□□□□□ -0.18
SLIRP-210ENST00000557431 TRIM10Q9UDY6 481 aa13.91□□□□□ -0.18
SLIRP-210ENST00000557431 SHOC2Q9UQ13 582 aa13.91□□□□□ -0.18
SLIRP-210ENST00000557431 MAN2B2Q9Y2E5 1009 aa13.91□□□□□ -0.18
SLIRP-210ENST00000557431 SNRNP200O75643 2136 aaKnown RBP13.91□□□□□ -0.18
SLIRP-210ENST00000557431 MN1Q10571 1320 aaPredicted RBP13.9□□□□□ -0.18
SLIRP-210ENST00000557431 LRRK2Q5S007 2527 aa13.9□□□□□ -0.18
SLIRP-210ENST00000557431 MATN3O15232 486 aa13.9□□□□□ -0.18
SLIRP-210ENST00000557431 CAPN5O15484 640 aaPredicted RBP13.9□□□□□ -0.18
SLIRP-210ENST00000557431 NUAK1O60285 661 aa13.9□□□□□ -0.18
SLIRP-210ENST00000557431 KATNA1O75449 491 aa13.9□□□□□ -0.18
SLIRP-210ENST00000557431 DNAJB5O75953 348 aa13.9□□□□□ -0.18
SLIRP-210ENST00000557431 KIAA0754O94854 1291 aa13.9□□□□□ -0.18
SLIRP-210ENST00000557431 PYGLP06737 847 aa13.9□□□□□ -0.18
SLIRP-210ENST00000557431 MYBL1P10243 752 aa13.9□□□□□ -0.18
SLIRP-210ENST00000557431 SLC19A1P41440 591 aa13.9□□□□□ -0.18
SLIRP-210ENST00000557431 TAS2R40P59535 323 aa13.9□□□□□ -0.18
SLIRP-210ENST00000557431 PPP1CAP62136 330 aa13.9□□□□□ -0.18
SLIRP-210ENST00000557431 UBE2IP63279 158 aaKnown RBP13.9□□□□□ -0.18
SLIRP-210ENST00000557431 GBE1Q04446 702 aa13.9□□□□□ -0.18
SLIRP-210ENST00000557431 ZBTB17Q13105 803 aa13.9□□□□□ -0.18
SLIRP-210ENST00000557431 PIGHQ14442 188 aaPredicted RBP13.9□□□□□ -0.18
SLIRP-210ENST00000557431 PAFAH1B3Q15102 231 aaKnown RBP13.9□□□□□ -0.18
SLIRP-210ENST00000557431 HGSNATQ68CP4 663 aa13.9□□□□□ -0.18
SLIRP-210ENST00000557431 B4GALNT4Q76KP1 1039 aa13.9□□□□□ -0.18
SLIRP-210ENST00000557431 NLRP8Q86W28 1048 aa13.9□□□□□ -0.18
SLIRP-210ENST00000557431 TRIM11Q96F44 468 aa13.9□□□□□ -0.18
SLIRP-210ENST00000557431 C9orf72Q96LT7 481 aa13.9□□□□□ -0.18
SLIRP-210ENST00000557431 OR6C1Q96RD1 312 aa13.9□□□□□ -0.18
SLIRP-210ENST00000557431 HERPUD2Q9BSE4 406 aa13.9□□□□□ -0.18
SLIRP-210ENST00000557431 SPATA16Q9BXB7 569 aa13.9□□□□□ -0.18
SLIRP-210ENST00000557431 PKD2L2Q9NZM6 624 aa13.9□□□□□ -0.18
SLIRP-210ENST00000557431 ZNF624Q9P2J8 865 aaPredicted RBP13.9□□□□□ -0.18
SLIRP-210ENST00000557431 KCNMB2Q9Y691 235 aa13.9□□□□□ -0.18
SLIRP-210ENST00000557431 SPTAN1Q13813 2472 aaKnown RBP13.89□□□□□ -0.19
SLIRP-210ENST00000557431 CDC14CA4D256 554 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms