RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, human

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSEN1-222	ENST00000557356	TMEM115	Q12893	351 aa	Predicted RBP	7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	SNX1	Q13596	522 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	SPIDR	Q14159	915 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	KIR2DS5	Q14953	304 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	CERCAM	Q5T4B2	595 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	HES3	Q5TGS1	186 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	LYPLAL1	Q5VWZ2	237 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	ALS2CL	Q60I27	953 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	ZNF449	Q6P9G9	518 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	UNQ6494/PRO21346	Q6UXR6	183 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	PPP1R21	Q6ZMI0	780 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	KDM7A	Q6ZMT4	941 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	RBM44	Q6ZP01	1051 aa	Known RBP	7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	MARK2	Q7KZI7	788 aa	Known RBP	7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	CHST15	Q7LFX5	561 aa	Predicted RBP	7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	SLC9B2	Q86UD5	537 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	LRRTM4	Q86VH4	590 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	REXO1L1P	Q8IX06	675 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	PELI3	Q8N2H9	469 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	RASGEF1C	Q8N431	466 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	DCBLD1	Q8N8Z6	715 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	KDF1	Q8NAX2	398 aa	Predicted RBP	7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	OR4K2	Q8NGD2	314 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	ACTRT1	Q8TDG2	376 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	GRK7	Q8WTQ7	553 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	PEX13	Q92968	403 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	TMEM159	Q96B96	161 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	NXPE2	Q96DL1	559 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	DCUN1D1	Q96GG9	259 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	SMIM14	Q96QK8	99 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	GFM1	Q96RP9	751 aa	Known RBP	7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	AGAP2	Q99490	1192 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	STRADB	Q9C0K7	418 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	EPB41L1	Q9H4G0	881 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	CCDC86	Q9H6F5	360 aa	Known RBP	7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	BPIFA1	Q9NP55	256 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	EIF2B3	Q9NR50	452 aa	Known RBP	7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	RAB6B	Q9NRW1	208 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	SMOX	Q9NWM0	555 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	AKAP7	Q9P0M2	348 aa	Predicted RBP	7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	LRIT1	Q9P2V4	623 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	ATXN10	Q9UBB4	475 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	RNF14	Q9UBS8	474 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	DKK4	Q9UBT3	224 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	KLK13	Q9UKR3	277 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	RIMKLB	Q9ULI2	386 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	PNMA8B	Q9ULN7	279 aa	Predicted RBP	7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	DOCK9	Q9BZ29	2069 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	TMEM131	Q92545	1883 aa		7.77	□□□□□ -1.17
PSEN1-222	ENST00000557356	ANKRD36	A6QL64	1941 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	LY6G6E	A0A0G2JKS1	128 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	HEATR9	A2RTY3	570 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	TRABD2B	A6NFA1	517 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356		B4DGG1	531 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356		F5H423	210 aa	Predicted RBP	7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356		H7C0S8	307 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	PGRMC1	O00264	195 aa	Known RBP	7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	QSOX1	O00391	747 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	AURKA	O14965	403 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	NOBOX	O60393	691 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	SRP72	O76094	671 aa	Known RBP	7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	SUN1	O94901	812 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	METTL18	O95568	372 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	FUCA1	P04066	466 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	APRT	P07741	180 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	ZNF7	P17097	686 aa	Predicted RBP	7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	ZNF8	P17098	575 aa	Predicted RBP	7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	MSH3	P20585	1137 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	ADRA1D	P25100	572 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	CXCR5	P32302	372 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	HAL	P42357	657 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	NPY2R	P49146	381 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	GPLD1	P80108	840 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	TARDBP	Q13148	414 aa	Known RBP eCLIP	7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	EIF3I	Q13347	325 aa	Known RBP	7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	SQSTM1	Q13501	440 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	SEMA5A	Q13591	1074 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	HLTF	Q14527	1009 aa	Known RBP eCLIP	7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	CHRNA6	Q15825	494 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	INSC	Q1MX18	579 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	ATP13A5	Q4VNC0	1218 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	CDCP2	Q5VXM1	449 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	DENND5A	Q6IQ26	1287 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	GUSBP11	Q6P575	273 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	IYD	Q6PHW0	289 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	SLC30A9	Q6PML9	568 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	FAM151B	Q6UXP7	276 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	WASH2P	Q6VEQ5	465 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	CERS6	Q6ZMG9	384 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	SNX20	Q7Z614	316 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	ADGRG6	Q86SQ4	1221 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	PIM3	Q86V86	326 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	AMZ2	Q86W34	360 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	C17orf82	Q86X59	251 aa	Predicted RBP	7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	NRROS	Q86YC3	692 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	RBM12B	Q8IXT5	1001 aa	Known RBP	7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	DDHD1	Q8NEL9	900 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	ATG4A	Q8WYN0	398 aa		7.76	□□□□□ -1.17
PSEN1-222	ENST00000557356	GATA6	Q92908	595 aa		7.76	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms