RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 RMI1Q9H9A7 625 aa13.46□□□□□ -0.25
SHMT2-228ENST00000557302 TRIM39Q9HCM9 518 aa13.46□□□□□ -0.25
SHMT2-228ENST00000557302 EVA1BQ9NVM1 165 aa13.46□□□□□ -0.25
SHMT2-228ENST00000557302 SMOXQ9NWM0 555 aa13.46□□□□□ -0.25
SHMT2-228ENST00000557302 PCYOX1Q9UHG3 505 aa13.46□□□□□ -0.25
SHMT2-228ENST00000557302 APOBEC2Q9Y235 224 aaKnown RBP13.46□□□□□ -0.25
SHMT2-228ENST00000557302 NEU2Q9Y3R4 380 aa13.46□□□□□ -0.25
SHMT2-228ENST00000557302 GPSM3Q9Y4H4 160 aa13.46□□□□□ -0.25
SHMT2-228ENST00000557302 NCOR2Q9Y618 2525 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 MROH6A6NGR9 719 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 NUAK1O60285 661 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 UGT1A9O60656 530 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 DNAJC6O75061 913 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 SRP72O76094 671 aaKnown RBP13.45□□□□□ -0.26
SHMT2-228ENST00000557302 FTH1P19P0C7X4 201 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 UGT1A6P19224 532 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 ITGALP20701 1170 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 UGT1A1P22309 533 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 UGT1A4P22310 534 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 ADRA1DP25100 572 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 UGT1A3P35503 534 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 UGT1A5P35504 534 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 ADCY8P40145 1251 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 MAGEA6P43360 314 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 SESN2P58004 480 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-228ENST00000557302 DAB2P98082 770 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 DNAJC3Q13217 504 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 LRP8Q14114 963 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 KCNJ11Q14654 390 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 SKIDA1Q1XH10 827 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 CCDC38Q502W7 563 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 PYCR3Q53H96 274 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 LDLRAP1Q5SW96 308 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 C6orf132Q5T0Z8 1188 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 ZNF648Q5T619 568 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-228ENST00000557302 N4BP2L1Q5TBK1 243 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-228ENST00000557302 SLCO2A1Q92959 643 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 APOLD1Q96LR9 279 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 RANBP9Q96S59 729 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 ZCCHC2Q9C0B9 1178 aaKnown RBP13.45□□□□□ -0.26
SHMT2-228ENST00000557302 ASB8Q9H765 288 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 UGT1A7Q9HAW7 530 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 UGT1A10Q9HAW8 530 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 UGT1A8Q9HAW9 530 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 NLE1Q9NVX2 485 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-228ENST00000557302 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.45□□□□□ -0.26
SHMT2-228ENST00000557302 NCKIPSDQ9NZQ3 722 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 BFARQ9NZS9 450 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 ATXN10Q9UBB4 475 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 ZNHIT2Q9UHR6 403 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 TMPRSS11EQ9UL52 423 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 GPR34Q9UPC5 381 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 SCN8AQ9UQD0 1980 aa13.45□□□□□ -0.26
SHMT2-228ENST00000557302 GOLGA4Q13439 2230 aaKnown RBP13.44□□□□□ -0.26
SHMT2-228ENST00000557302 COL5A1P20908 1838 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-228ENST00000557302 TCRBV7S3A2A0A539 114 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 CCDC78A2IDD5 438 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 CCL22O00626 93 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 GPR39O43194 453 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 VEGFDO43915 354 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 MTX2O75431 263 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 ZNF8P17098 575 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-228ENST00000557302 CKMT2P17540 419 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 MC4RP32245 332 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 NPY2RP49146 381 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 DUSP3P51452 185 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-228ENST00000557302 XIAPP98170 497 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 CTBSQ01459 385 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 DR1Q01658 176 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 NFATC2Q13469 925 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 PEX6Q13608 980 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 PTK6Q13882 451 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 GTF2H3Q13889 308 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 GPRC6AQ5T6X5 926 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 LRRC8BQ6P9F7 803 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 SYDE1Q6ZW31 735 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-228ENST00000557302 NLRP9Q7RTR0 991 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 ADGRG6Q86SQ4 1221 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 FAM46DQ8NEK8 389 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 DDHD1Q8NEL9 900 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 PPHLN1Q8NEY8 458 aaKnown RBP13.44□□□□□ -0.26
SHMT2-228ENST00000557302 CCL4L1Q8NHW4 92 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 GPBAR1Q8TDU6 330 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 CPT1BQ92523 772 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 GLMNQ92990 594 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 ULK4Q96C45 1275 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 TTC25Q96NG3 672 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 BOCQ9BWV1 1114 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 IL22Q9GZX6 179 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 ASIC3Q9UHC3 531 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 CRLS1Q9UJA2 301 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 TCAF1Q9Y4C2 921 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 SLC30A1Q9Y6M5 507 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 LRP4O75096 1905 aa13.44□□□□□ -0.26
SHMT2-228ENST00000557302 H7C0S8 307 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 GRID2O43424 1007 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 TMEM63AO94886 807 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 CDK14O94921 469 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 TRIM16O95361 564 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 CKMT1AP12532 417 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms