RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 A8MU76 341 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 GRID2O43424 1007 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 SNX2O60749 519 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 ACP5P13686 325 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 UGT1A3P35503 534 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 NFATC2Q13469 925 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 TRIM14Q14142 442 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 PDK1Q15118 436 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 TBR1Q16650 682 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 DCAF12Q5T6F0 453 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 SLC9A4Q6AI14 798 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 KDELC2Q7Z4H8 507 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 ARHGAP22Q7Z5H3 698 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 FAM129CQ86XR2 697 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 IL22RA1Q8N6P7 574 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 NCSTNQ92542 709 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 PMEPA1Q969W9 287 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 EID2BQ96D98 161 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 IMP4Q96G21 291 aaKnown RBP15.72■□□□□ 0.11
TUBB3-213ENST00000557262 TRIB3Q96RU7 358 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 SPATA16Q9BXB7 569 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.72■□□□□ 0.11
TUBB3-213ENST00000557262 ZMYND15Q9H091 742 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 MAGEE1Q9HCI5 957 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 TRIM39Q9HCM9 518 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 ASH1LQ9NR48 2969 aaKnown RBP15.72■□□□□ 0.11
TUBB3-213ENST00000557262 RAD18Q9NS91 495 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 ATXN10Q9UBB4 475 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 TENM4Q6N022 2769 aa15.71■□□□□ 0.11
TUBB3-213ENST00000557262 KIR2DS5A0A0G2JLQ3 304 aa15.71■□□□□ 0.11
TUBB3-213ENST00000557262 A0A0G2JNG1 304 aa15.71■□□□□ 0.11
TUBB3-213ENST00000557262 A6NCN8 305 aa15.71■□□□□ 0.11
TUBB3-213ENST00000557262 KIR2DS3K7RE56 304 aa15.71■□□□□ 0.11
TUBB3-213ENST00000557262 APOL1O14791 398 aa15.71■□□□□ 0.11
TUBB3-213ENST00000557262 CBFA2T2O43439 604 aa15.71■□□□□ 0.11
TUBB3-213ENST00000557262 SLC28A2O43868 658 aa15.71■□□□□ 0.11
TUBB3-213ENST00000557262 SLC25A14O95258 325 aaPredicted RBP15.71■□□□□ 0.11
TUBB3-213ENST00000557262 F3P13726 295 aa15.71■□□□□ 0.11
TUBB3-213ENST00000557262 ZFXP17010 805 aaPredicted RBP15.71■□□□□ 0.11
TUBB3-213ENST00000557262 CLCNKAP51800 687 aa15.71■□□□□ 0.11
TUBB3-213ENST00000557262 EPHA4P54764 986 aa15.71■□□□□ 0.11
TUBB3-213ENST00000557262 RAB15P59190 212 aa15.71■□□□□ 0.11
TUBB3-213ENST00000557262 CYP4F2P78329 520 aa15.71■□□□□ 0.11
TUBB3-213ENST00000557262 CDK18Q07002 472 aa15.71■□□□□ 0.11
TUBB3-213ENST00000557262 NFATC3Q12968 1075 aa15.71■□□□□ 0.11
TUBB3-213ENST00000557262 GALNT3Q14435 633 aa15.71■□□□□ 0.11
TUBB3-213ENST00000557262 KIR2DS5Q14953 304 aa15.71■□□□□ 0.11
TUBB3-213ENST00000557262 SNAP47Q5SQN1 464 aa15.71■□□□□ 0.11
TUBB3-213ENST00000557262 TMC3Q7Z5M5 1100 aa15.71■□□□□ 0.11
TUBB3-213ENST00000557262 GPR26Q8NDV2 337 aa15.71■□□□□ 0.11
TUBB3-213ENST00000557262 AGAP3Q96P47 875 aa15.71■□□□□ 0.11
TUBB3-213ENST00000557262 TEFMQ96QE5 360 aaKnown RBP15.71■□□□□ 0.11
TUBB3-213ENST00000557262 SLC12A9Q9BXP2 914 aa15.71■□□□□ 0.11
TUBB3-213ENST00000557262 FAM117AQ9C073 453 aa15.71■□□□□ 0.11
TUBB3-213ENST00000557262 BRD8Q9H0E9 1235 aa15.71■□□□□ 0.11
TUBB3-213ENST00000557262 SLC25A51Q9H1U9 297 aa15.71■□□□□ 0.11
TUBB3-213ENST00000557262 SHOC2Q9UQ13 582 aa15.71■□□□□ 0.11
TUBB3-213ENST00000557262 GPR89AB7ZAQ6 455 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 PPP1R12AO14974 1030 aaPredicted RBP15.7■□□□□ 0.1
TUBB3-213ENST00000557262 MTA2O94776 668 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 GPR89BP0CG08 455 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 ZNF8P17098 575 aaPredicted RBP15.7■□□□□ 0.1
TUBB3-213ENST00000557262 ITGB6P18564 788 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 MC2RQ01718 297 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 FAM182AQ5T1J6 154 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 LRRC38Q5VT99 294 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 ANKS6Q68DC2 871 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 CCDC70Q6NSX1 233 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 NPNTQ6UXI9 565 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 PHYKPLQ8IUZ5 450 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 RHOT2Q8IXI1 618 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 CACNA2D3Q8IZS8 1091 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 TRAM1L1Q8N609 369 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 BMPERQ8N8U9 685 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 AVL9Q8NBF6 648 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 HTR3CQ8WXA8 447 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 TADA1Q96BN2 335 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 CCDC42Q96M95 316 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 CHP1Q99653 195 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 ZSCAN5AQ9BUG6 496 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 CEP41Q9BYV8 373 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 GPR63Q9BZJ6 419 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 SPRY4Q9C004 299 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 OR2AG1Q9H205 316 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 EPB41L1Q9H4G0 881 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 ARFGAP3Q9NP61 516 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 PRDM8Q9NQV8 689 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 FBXO8Q9NRD0 319 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 STARD5Q9NSY2 213 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 CPNE7Q9UBL6 633 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 HEMK1Q9Y5R4 338 aaPredicted RBP15.7■□□□□ 0.1
TUBB3-213ENST00000557262 ADGRG1Q9Y653 693 aa15.7■□□□□ 0.1
TUBB3-213ENST00000557262 ZFC3H1O60293 1989 aaKnown RBP15.69■□□□□ 0.1
TUBB3-213ENST00000557262 SDK2Q58EX2 2172 aa15.69■□□□□ 0.1
TUBB3-213ENST00000557262 CHUKO15111 745 aa15.69■□□□□ 0.1
TUBB3-213ENST00000557262 RAD1O60671 282 aa15.69■□□□□ 0.1
TUBB3-213ENST00000557262 TPM1P09493 284 aa15.69■□□□□ 0.1
TUBB3-213ENST00000557262 FAM87AP0C7U9 286 aa15.69■□□□□ 0.1
TUBB3-213ENST00000557262 PIRTP0C851 137 aa15.69■□□□□ 0.1
TUBB3-213ENST00000557262 XRCC1P18887 633 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms