RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 CUL9Q8IWT3 2517 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 CCDC171Q6TFL3 1326 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 ERICH2A1L162 156 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 OR6C68A6NDL8 312 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 FAM90A7PA6NKC0 464 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 SH2D7A6NKC9 451 aaPredicted RBP5.31□□□□□ -1.56
HIF1A-209ENST00000556827 FAM90A22PA8MWA6 464 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 FAM90A12PA8MX19 464 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 FAM90A23PA8MXZ1 464 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 SMAD6O43541 496 aaKnown RBP5.31□□□□□ -1.56
HIF1A-209ENST00000556827 DCXO43602 365 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 ZC3H11AO75152 810 aaKnown RBP eCLIP5.31□□□□□ -1.56
HIF1A-209ENST00000556827 TMCC1O94876 653 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 GGPS1O95749 300 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 POLR2MP0CAP2 368 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 ZNF286BP0CG31 522 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 T-ENOLP0DO92 83 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 CDC25AP30304 524 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 GPM6BQ13491 265 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 NEDD9Q14511 834 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 QRICH1Q2TAL8 776 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 CELF3Q5SZQ8 465 aaKnown RBP5.31□□□□□ -1.56
HIF1A-209ENST00000556827 TMEM268Q5VZI3 342 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 GJB7Q6PEY0 223 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 TMCO2Q7Z6W1 182 aaPredicted RBP5.31□□□□□ -1.56
HIF1A-209ENST00000556827 PELI3Q8N2H9 469 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 DPP10Q8N608 796 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 KDM1BQ8NB78 822 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 DBF4BQ8NFT6 615 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 USP13Q92995 863 aaPredicted RBP5.31□□□□□ -1.56
HIF1A-209ENST00000556827 FRG2BQ96QU4 278 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.31□□□□□ -1.56
HIF1A-209ENST00000556827 IFIH1Q9BYX4 1025 aaKnown RBP5.31□□□□□ -1.56
HIF1A-209ENST00000556827 RWDD1Q9H446 243 aaPredicted RBP5.31□□□□□ -1.56
HIF1A-209ENST00000556827 TTC12Q9H892 705 aaPredicted RBP5.31□□□□□ -1.56
HIF1A-209ENST00000556827 MRPL44Q9H9J2 332 aaKnown RBP5.31□□□□□ -1.56
HIF1A-209ENST00000556827 PXMP2Q9NR77 195 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 OSGIN2Q9Y236 505 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 RAP2CQ9Y3L5 183 aa5.31□□□□□ -1.56
HIF1A-209ENST00000556827 A0A0D9SFI3 127 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 KLRF2D3W0D1 207 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 H3BQ06 376 aaPredicted RBP5.3□□□□□ -1.56
HIF1A-209ENST00000556827 ZBTB5O15062 677 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 TSPAN3O60637 253 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 STAM2O75886 525 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 RB1P06400 928 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 PRKCHP24723 683 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 HOXA13P31271 388 aaPredicted RBP5.3□□□□□ -1.56
HIF1A-209ENST00000556827 CTNNB1P35222 781 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 SKIV2L2P42285 1042 aaKnown RBP5.3□□□□□ -1.56
HIF1A-209ENST00000556827 TUBP50607 506 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 HSD17B4P51659 736 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 ERV3-1Q14264 604 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 PTGR1Q14914 329 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 NAA25Q14CX7 972 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 SLC18A3Q16572 532 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 EPC2Q52LR7 807 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 TMEM71Q6P5X7 295 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 CWC27Q6UX04 472 aaKnown RBP5.3□□□□□ -1.56
HIF1A-209ENST00000556827 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.3□□□□□ -1.564e-15■■■■□ 26
HIF1A-209ENST00000556827 STOX1Q6ZVD7 989 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.3□□□□□ -1.56
HIF1A-209ENST00000556827 SERINC5Q86VE9 423 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 WDR5BQ86VZ2 330 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 TMTC1Q8IUR5 882 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 GHDCQ8N2G8 530 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 HORMAD2Q8N7B1 307 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 RUFY2Q8WXA3 655 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 TOP1MTQ969P6 601 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 PABPC5Q96DU9 382 aaKnown RBP5.3□□□□□ -1.56
HIF1A-209ENST00000556827 EIF2AK1Q9BQI3 630 aaKnown RBP5.3□□□□□ -1.56
HIF1A-209ENST00000556827 NPLQ9BXD5 320 aaPredicted RBP5.3□□□□□ -1.56
HIF1A-209ENST00000556827 POLDIP3Q9BY77 421 aaKnown RBP5.3□□□□□ -1.56
HIF1A-209ENST00000556827 GPR63Q9BZJ6 419 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 B3GNT4Q9C0J1 378 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 SLC32A1Q9H598 525 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 JMJD4Q9H9V9 463 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 IFT80Q9P2H3 777 aaPredicted RBP5.3□□□□□ -1.56
HIF1A-209ENST00000556827 TBC1D14Q9P2M4 693 aa5.3□□□□□ -1.56
HIF1A-209ENST00000556827 MYO5AQ9Y4I1 1855 aaKnown RBP5.3□□□□□ -1.56
HIF1A-209ENST00000556827 DNAH12Q6ZR08 3092 aa5.29□□□□□ -1.56
HIF1A-209ENST00000556827 CCDC189A1A4V9 331 aa5.29□□□□□ -1.56
HIF1A-209ENST00000556827 TMEM247A6NEH6 219 aa5.29□□□□□ -1.56
HIF1A-209ENST00000556827 M0QZ92 97 aa5.29□□□□□ -1.56
HIF1A-209ENST00000556827 HAS3O00219 553 aa5.29□□□□□ -1.56
HIF1A-209ENST00000556827 MDM4O15151 490 aa5.29□□□□□ -1.56
HIF1A-209ENST00000556827 HBP1O60381 514 aa5.29□□□□□ -1.56
HIF1A-209ENST00000556827 IFNA2P01563 188 aa5.29□□□□□ -1.56
HIF1A-209ENST00000556827 SMIM10L2AP0DMW4 78 aa5.29□□□□□ -1.56
HIF1A-209ENST00000556827 SMIM10L2BP0DMW5 78 aa5.29□□□□□ -1.56
HIF1A-209ENST00000556827 UNGP13051 313 aaPredicted RBP5.29□□□□□ -1.56
HIF1A-209ENST00000556827 GPNMBQ14956 572 aa5.29□□□□□ -1.56
HIF1A-209ENST00000556827 HSDL1Q3SXM5 330 aa5.29□□□□□ -1.56
HIF1A-209ENST00000556827 TCEAL5Q5H9L2 206 aa5.29□□□□□ -1.56
HIF1A-209ENST00000556827 METTL7BQ6UX53 244 aa5.29□□□□□ -1.56
HIF1A-209ENST00000556827 TBC1D10CQ8IV04 446 aa5.29□□□□□ -1.56
HIF1A-209ENST00000556827 ADHFE1Q8IWW8 467 aa5.29□□□□□ -1.56
HIF1A-209ENST00000556827 LSM14AQ8ND56 463 aaKnown RBP5.29□□□□□ -1.56
HIF1A-209ENST00000556827 NEK9Q8TD19 979 aa5.29□□□□□ -1.56
HIF1A-209ENST00000556827 ATOH1Q92858 354 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms