RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 CACTIN-AS1Q8N1I8 211 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 FAM26EQ8N5C1 309 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 ARL14EPQ8N8R7 260 aaPredicted RBP6.84□□□□□ -1.31
SLIRP-204ENST00000555890 ANKS4BQ8N8V4 417 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 HJURPQ8NCD3 748 aaPredicted RBP6.84□□□□□ -1.31
SLIRP-204ENST00000555890 SPATA3Q8NHX4 192 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 GDAP1Q8TB36 358 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 LRRC8CQ8TDW0 803 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 ACMSDQ8TDX5 336 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 DENND1AQ8TEH3 1009 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 CHAC2Q8WUX2 184 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 ATP2A3Q93084 1043 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 GTPBP3Q969Y2 492 aaKnown RBP6.84□□□□□ -1.31
SLIRP-204ENST00000555890 GRAMD1AQ96CP6 724 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 TMA16Q96EY4 203 aaKnown RBP6.84□□□□□ -1.31
SLIRP-204ENST00000555890 APOPT1Q96IL0 206 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 ZNF317Q96PQ6 595 aaPredicted RBP6.84□□□□□ -1.31
SLIRP-204ENST00000555890 CPNE1Q99829 537 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 KIFC1Q9BW19 673 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 CINPQ9BW66 212 aaPredicted RBP6.84□□□□□ -1.31
SLIRP-204ENST00000555890 POLR1EQ9GZS1 481 aaKnown RBP6.84□□□□□ -1.31
SLIRP-204ENST00000555890 SMG9Q9H0W8 520 aaKnown RBP6.84□□□□□ -1.31
SLIRP-204ENST00000555890 SOX17Q9H6I2 414 aaPredicted RBP6.84□□□□□ -1.31
SLIRP-204ENST00000555890 KIF9Q9HAQ2 790 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 ARNT2Q9HBZ2 717 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 MRM3Q9HC36 420 aaKnown RBP6.84□□□□□ -1.31
SLIRP-204ENST00000555890 SMYD2Q9NRG4 433 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 C20orf96Q9NUD7 363 aaPredicted RBP6.84□□□□□ -1.31
SLIRP-204ENST00000555890 PIH1D1Q9NWS0 290 aaKnown RBP6.84□□□□□ -1.31
SLIRP-204ENST00000555890 SLC6A14Q9UN76 642 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 SH3BP1Q9Y3L3 701 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 PKD1L1Q8TDX9 2849 aa6.84□□□□□ -1.31
SLIRP-204ENST00000555890 SPAG17Q6Q759 2223 aa6.84□□□□□ -1.32
SLIRP-204ENST00000555890 HELZP42694 1942 aaKnown RBP6.84□□□□□ -1.32
SLIRP-204ENST00000555890 HEATR9A2RTY3 570 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 TIMM44O43615 452 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 UGT1A9O60656 530 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 RFPL3O75679 317 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 KIAA0754O94854 1291 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 EPN2O95208 641 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 OLFM2O95897 454 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 EPOP01588 193 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 KLKB1P03952 638 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 CKMP06732 381 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 SERPINF2P08697 491 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 ERVK-10P10266 1014 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 NEFHP12036 1026 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 MYL4P12829 197 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 LAMP2P13473 410 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 NME1P15531 152 aaKnown RBP6.83□□□□□ -1.32
SLIRP-204ENST00000555890 PTPN2P17706 415 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 CD72P21854 359 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 DDX6P26196 483 aaKnown RBP eCLIP6.83□□□□□ -1.32
SLIRP-204ENST00000555890 ACVRL1P37023 503 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 HADHAP40939 763 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 CD86P42081 329 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 SERPINH1P50454 418 aaKnown RBP6.83□□□□□ -1.32
SLIRP-204ENST00000555890 CSE1LP55060 971 aaKnown RBP6.83□□□□□ -1.32
SLIRP-204ENST00000555890 RPS24P62847 133 aaKnown RBP6.83□□□□□ -1.32
SLIRP-204ENST00000555890 SLC7A9P82251 487 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 CTBSQ01459 385 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 DSC2Q02487 901 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 NIPAL4Q0D2K0 466 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 ILF2Q12905 390 aaKnown RBP6.83□□□□□ -1.32
SLIRP-204ENST00000555890 OLIG2Q13516 323 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 POU6F1Q14863 301 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 UBXN2BQ14CS0 331 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 SLC14A2Q15849 920 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 PDK4Q16654 411 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 UGP2Q16851 508 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 ARHGAP15Q53QZ3 475 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 WIPI1Q5MNZ9 446 aaPredicted RBP6.83□□□□□ -1.32
SLIRP-204ENST00000555890 PERM1Q5SV97 790 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 MROH9Q5TGP6 573 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 RNF219Q5W0B1 726 aaPredicted RBP6.83□□□□□ -1.32
SLIRP-204ENST00000555890 TXNDC8Q6A555 127 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 DENND5AQ6IQ26 1287 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 FOXR1Q6PIV2 292 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 CES3Q6UWW8 571 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 PACS1Q6VY07 963 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 RGS9BPQ6ZS82 235 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 HTR3DQ70Z44 454 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 NLRC3Q7RTR2 1065 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 PIGWQ7Z7B1 504 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 STRA8Q7Z7C7 330 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 KCNMB4Q86W47 210 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 THNSL2Q86YJ6 484 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 NDUFAF2Q8N183 169 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 LEMD2Q8NC56 503 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 CCDC197Q8NCU1 140 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 OR7D4Q8NG98 312 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 TCP10LQ8TDR4 215 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 ZNF707Q96C28 371 aaPredicted RBP6.83□□□□□ -1.32
SLIRP-204ENST00000555890 MYEOVQ96EZ4 313 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 FEM1CQ96JP0 617 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 SERAC1Q96JX3 654 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 CABS1Q96KC9 395 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 RANBP9Q96S59 729 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 CYP2S1Q96SQ9 504 aa6.83□□□□□ -1.32
SLIRP-204ENST00000555890 KLF6Q99612 283 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms