RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 ASMTLO95671 621 aa12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 ATP1A1P05023 1023 aaKnown RBP12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 FGF3P11487 239 aaPredicted RBP12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 F3P13726 295 aa12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 CSTF2P33240 577 aaKnown RBP eCLIP12.57□□□□□ -0.42e-10■■□□□ 11.7
HNRNPC-221ENST00000555883 MAPK10P53779 464 aa12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 HHEXQ03014 270 aa12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 CDK18Q07002 472 aa12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 AP1B1Q10567 949 aa12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 TGIF1Q15583 401 aa12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 TEX44Q53QW1 395 aa12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 ZNF569Q5MCW4 686 aa12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 MANEAQ5SRI9 462 aa12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 KIAA1614Q5VZ46 1190 aa12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 MARK2Q7KZI7 788 aaKnown RBP12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 CHST15Q7LFX5 561 aaPredicted RBP12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 TMC3Q7Z5M5 1100 aa12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 SLC9B2Q86UD5 537 aa12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 TRAM1L1Q8N609 369 aa12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 ZSCAN1Q8NBB4 408 aa12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 RCBTB1Q8NDN9 531 aa12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 DTX3LQ8TDB6 740 aa12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 TEFMQ96QE5 360 aaKnown RBP12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 SLC38A3Q99624 504 aa12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 CHP1Q99653 195 aa12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 UCK1Q9HA47 277 aa12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 TRIM39Q9HCM9 518 aa12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 TBC1D29Q9UFV1 150 aa12.57□□□□□ -0.4
HNRNPC-221ENST00000555883 UNC13CQ8NB66 2214 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 LILRA5A6NI73 299 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 B8ZZF3 427 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 MTSS1O43312 755 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 GRID2O43424 1007 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 PSTPIP1O43586 416 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 EPOP01588 193 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 KRT1P04264 644 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 CCL4P13236 92 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 TFDP2Q14188 446 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 PRKD1Q15139 912 aaPredicted RBP12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 ODF2Q5BJF6 829 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 NKAIN2Q5VXU1 208 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 ARHGAP22Q7Z5H3 698 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 ZFAND4Q86XD8 727 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 PHYKPLQ8IUZ5 450 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 BMPERQ8N8U9 685 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 LRRN4Q8WUT4 740 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 AHCYL2Q96HN2 611 aaKnown RBP12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 TEKT5Q96M29 485 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 AGAP3Q96P47 875 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 PLEKHG4BQ96PX9 1271 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 VPS35Q96QK1 796 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 ZPBPQ9BS86 351 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 SEMA4CQ9C0C4 833 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 TRABDQ9H4I3 376 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 SPTLC3Q9NUV7 552 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 ATXN10Q9UBB4 475 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 PCDHGA4Q9Y5G9 962 aa12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 PCYT1BQ9Y5K3 369 aaPredicted RBP12.56□□□□□ -0.4
HNRNPC-221ENST00000555883 AHCTF1Q8WYP5 2266 aa12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 A0A0A6YYK5 440 aaPredicted RBP12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 PRR19A6NJB7 356 aa12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 VEGFDO43915 354 aa12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 SLC25A14O95258 325 aaPredicted RBP12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 NDST3O95803 873 aa12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 EML2O95834 649 aa12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 SFTPCP11686 197 aa12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 ACP5P13686 325 aa12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 CDKN2BP42772 138 aa12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 ATP1A2P50993 1020 aa12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 ARSDP51689 593 aa12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 TBX2Q13207 712 aaPredicted RBP12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 LY6DQ14210 128 aa12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 GALNT3Q14435 633 aa12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 ZDHHC20Q5W0Z9 365 aa12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 CCDC70Q6NSX1 233 aa12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 RFX6Q8HWS3 928 aa12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 GPR26Q8NDV2 337 aa12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 GLYATL1Q969I3 302 aa12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 VAT1Q99536 393 aa12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 TIMM29Q9BSF4 260 aa12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 SPATA16Q9BXB7 569 aa12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 TSPY26PQ9H489 355 aa12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 GLOD4Q9HC38 313 aa12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.55□□□□□ -0.41e-9■■■□□ 15.2
HNRNPC-221ENST00000555883 ZNF711Q9Y462 761 aa12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 TENM4Q6N022 2769 aa12.55□□□□□ -0.4
HNRNPC-221ENST00000555883 ASH1LQ9NR48 2969 aaKnown RBP12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 LOC285095A0A1B0GVY8 99 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 AKR1B15C9JRZ8 316 aaPredicted RBP12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 KMOO15229 486 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 TOX3O15405 576 aaPredicted RBP12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 SPOPO43791 374 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 LCA5LO95447 670 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 ANKRD34CP0C6C1 535 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 ZNF8P17098 575 aaPredicted RBP12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 XRCC1P18887 633 aaPredicted RBP12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 COMTP21964 271 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 PTPN3P26045 913 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 HMGCLP35914 325 aa12.54□□□□□ -0.4
HNRNPC-221ENST00000555883 UBE2IP63279 158 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms