RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 ATF7IPQ6VMQ6 1270 aa3.63□□□□□ -1.83
SCFD1-216ENST00000555550 ZNF704Q6ZNC4 412 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-216ENST00000555550 OR10V1Q8NGI7 309 aa3.63□□□□□ -1.83
SCFD1-216ENST00000555550 SLC44A1Q8WWI5 657 aa3.63□□□□□ -1.83
SCFD1-216ENST00000555550 ZNF501Q96CX3 271 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-216ENST00000555550 STAMBPL1Q96FJ0 436 aa3.63□□□□□ -1.83
SCFD1-216ENST00000555550 ST6GAL2Q96JF0 529 aa3.63□□□□□ -1.83
SCFD1-216ENST00000555550 PIP5K1AQ99755 562 aa3.63□□□□□ -1.83
SCFD1-216ENST00000555550 HCFC1R1Q9NWW0 138 aa3.63□□□□□ -1.83
SCFD1-216ENST00000555550 DLGAP2Q9P1A6 1054 aa3.63□□□□□ -1.83
SCFD1-216ENST00000555550 OR14J1Q9UGF5 321 aa3.63□□□□□ -1.83
SCFD1-216ENST00000555550 POLG2Q9UHN1 485 aa3.63□□□□□ -1.83
SCFD1-216ENST00000555550 ACSL5Q9ULC5 683 aa3.63□□□□□ -1.83
SCFD1-216ENST00000555550 IGLV5-45A0A087WSX0 123 aa3.62□□□□□ -1.83
SCFD1-216ENST00000555550 C1orf226A1L170 272 aa3.62□□□□□ -1.83
SCFD1-216ENST00000555550 M0QZ24 198 aa3.62□□□□□ -1.83
SCFD1-216ENST00000555550 NPHP1O15259 732 aa3.62□□□□□ -1.83
SCFD1-216ENST00000555550 EIF3DO15371 548 aaKnown RBP eCLIP3.62□□□□□ -1.83
SCFD1-216ENST00000555550 TPD52L2O43399 206 aaKnown RBP3.62□□□□□ -1.83
SCFD1-216ENST00000555550 SYNGR3O43761 229 aa3.62□□□□□ -1.83
SCFD1-216ENST00000555550 EXTL3O43909 919 aa3.62□□□□□ -1.83
SCFD1-216ENST00000555550 EIF3JO75822 258 aaKnown RBP3.62□□□□□ -1.83
SCFD1-216ENST00000555550 SEC14L2O76054 403 aa3.62□□□□□ -1.83
SCFD1-216ENST00000555550 BAG4O95429 457 aaKnown RBP3.62□□□□□ -1.83
SCFD1-216ENST00000555550 SPARCP09486 303 aa3.62□□□□□ -1.83
SCFD1-216ENST00000555550 UBL4AP11441 157 aa3.62□□□□□ -1.83
SCFD1-216ENST00000555550 NR2F2P24468 414 aa3.62□□□□□ -1.83
SCFD1-216ENST00000555550 NOVP48745 357 aa3.62□□□□□ -1.83
SCFD1-216ENST00000555550 F2RL1P55085 397 aa3.62□□□□□ -1.83
SCFD1-216ENST00000555550 GOLGA8DPQ0D2H9 430 aa3.62□□□□□ -1.83
SCFD1-216ENST00000555550 CDC16Q13042 620 aa3.62□□□□□ -1.83
SCFD1-216ENST00000555550 GAGE5Q13069 117 aa3.62□□□□□ -1.83
SCFD1-216ENST00000555550 GAGE6Q13070 117 aa3.62□□□□□ -1.83
SCFD1-216ENST00000555550 PDE1CQ14123 709 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-216ENST00000555550 CCNG2Q16589 344 aa3.62□□□□□ -1.83
SCFD1-216ENST00000555550 CCNYL2Q5T2Q4 361 aa3.62□□□□□ -1.83
SCFD1-216ENST00000555550 INO80CQ6PI98 192 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-216ENST00000555550 CEACAM20Q6UY09 585 aa3.62□□□□□ -1.83
SCFD1-216ENST00000555550 PLEKHM3Q6ZWE6 761 aa3.62□□□□□ -1.83
SCFD1-216ENST00000555550 ADSSL1Q8N142 457 aa3.62□□□□□ -1.83
SCFD1-216ENST00000555550 METTL6Q8TCB7 284 aa3.62□□□□□ -1.83
SCFD1-216ENST00000555550 INTS12Q96CB8 462 aaKnown RBP3.62□□□□□ -1.83
SCFD1-216ENST00000555550 MMABQ96EY8 250 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-216ENST00000555550 TFB2MQ9H5Q4 396 aaKnown RBP3.62□□□□□ -1.83
SCFD1-216ENST00000555550 PREBQ9HCU5 417 aa3.62□□□□□ -1.83
SCFD1-216ENST00000555550 TCP11L1Q9NUJ3 509 aa3.62□□□□□ -1.83
SCFD1-216ENST00000555550 MARCH4Q9P2E8 410 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-216ENST00000555550 STK39Q9UEW8 545 aa3.62□□□□□ -1.83
SCFD1-216ENST00000555550 GJD2Q9UKL4 321 aa3.62□□□□□ -1.83
SCFD1-216ENST00000555550 NOTCH2Q04721 2471 aa3.61□□□□□ -1.83
SCFD1-216ENST00000555550 A0A1W2PPH5 198 aa3.61□□□□□ -1.83
SCFD1-216ENST00000555550 ANKRD28O15084 1053 aa3.61□□□□□ -1.83
SCFD1-216ENST00000555550 KCNN4O15554 427 aa3.61□□□□□ -1.83
SCFD1-216ENST00000555550 IGHV4-39P01824 125 aa3.61□□□□□ -1.83
SCFD1-216ENST00000555550 AHRP35869 848 aa3.61□□□□□ -1.83
SCFD1-216ENST00000555550 UBA7P41226 1012 aa3.61□□□□□ -1.83
SCFD1-216ENST00000555550 RPL7AP62424 266 aaKnown RBP3.61□□□□□ -1.83
SCFD1-216ENST00000555550 OLR1P78380 273 aa3.61□□□□□ -1.83
SCFD1-216ENST00000555550 TMEM115Q12893 351 aaPredicted RBP3.61□□□□□ -1.83
SCFD1-216ENST00000555550 TMEM95Q3KNT9 176 aa3.61□□□□□ -1.83
SCFD1-216ENST00000555550 SFMBT2Q5VUG0 894 aa3.61□□□□□ -1.83
SCFD1-216ENST00000555550 SLC35E4Q6ICL7 350 aa3.61□□□□□ -1.83
SCFD1-216ENST00000555550 SLC27A1Q6PCB7 646 aa3.61□□□□□ -1.83
SCFD1-216ENST00000555550 R3HCC1LQ7Z5L2 792 aaKnown RBP3.61□□□□□ -1.83
SCFD1-216ENST00000555550 NRROSQ86YC3 692 aa3.61□□□□□ -1.83
SCFD1-216ENST00000555550 TSPYL6Q8N831 410 aa3.61□□□□□ -1.83
SCFD1-216ENST00000555550 UTP15Q8TED0 518 aaKnown RBP3.61□□□□□ -1.83
SCFD1-216ENST00000555550 PPP4R1Q8TF05 950 aa3.61□□□□□ -1.83
SCFD1-216ENST00000555550 FAM149B1Q96BN6 582 aa3.61□□□□□ -1.83
SCFD1-216ENST00000555550 F2RL3Q96RI0 385 aa3.61□□□□□ -1.83
SCFD1-216ENST00000555550 SMC6Q96SB8 1091 aa3.61□□□□□ -1.83
SCFD1-216ENST00000555550 AGXT2Q9BYV1 514 aa3.61□□□□□ -1.83
SCFD1-216ENST00000555550 BARHL1Q9BZE3 327 aa3.61□□□□□ -1.83
SCFD1-216ENST00000555550 SIL1Q9H173 461 aa3.61□□□□□ -1.83
SCFD1-216ENST00000555550 LTB4R2Q9NPC1 389 aa3.61□□□□□ -1.83
SCFD1-216ENST00000555550 ABI3Q9P2A4 366 aa3.61□□□□□ -1.83
SCFD1-216ENST00000555550 PDP2Q9P2J9 529 aa3.61□□□□□ -1.83
SCFD1-216ENST00000555550 CNOT8Q9UFF9 292 aaKnown RBP3.61□□□□□ -1.83
SCFD1-216ENST00000555550 KDM3AQ9Y4C1 1321 aa3.61□□□□□ -1.83
SCFD1-216ENST00000555550 ZCWPW2A0A1B0GU75 182 aa3.6□□□□□ -1.83
SCFD1-216ENST00000555550 A0A1W2PRG0 241 aa3.6□□□□□ -1.83
SCFD1-216ENST00000555550 EIF4E1BA6NMX2 242 aaKnown RBP3.6□□□□□ -1.83
SCFD1-216ENST00000555550 PAGE4O60829 102 aa3.6□□□□□ -1.83
SCFD1-216ENST00000555550 JRKO75564 520 aa3.6□□□□□ -1.83
SCFD1-216ENST00000555550 SLC25A12O75746 678 aa3.6□□□□□ -1.83
SCFD1-216ENST00000555550 INHBAP08476 426 aa3.6□□□□□ -1.83
SCFD1-216ENST00000555550 KRT5P13647 590 aa3.6□□□□□ -1.83
SCFD1-216ENST00000555550 PAX1P15863 534 aa3.6□□□□□ -1.83
SCFD1-216ENST00000555550 AZU1P20160 251 aa3.6□□□□□ -1.83
SCFD1-216ENST00000555550 APOBEC1P41238 236 aaKnown RBP3.6□□□□□ -1.83
SCFD1-216ENST00000555550 PRCPP42785 496 aa3.6□□□□□ -1.83
SCFD1-216ENST00000555550 HSD17B4P51659 736 aa3.6□□□□□ -1.83
SCFD1-216ENST00000555550 MLLT10P55197 1068 aa3.6□□□□□ -1.83
SCFD1-216ENST00000555550 RPL24P83731 157 aaKnown RBP3.6□□□□□ -1.83
SCFD1-216ENST00000555550 ACVR2BQ13705 512 aa3.6□□□□□ -1.83
SCFD1-216ENST00000555550 SLC1A5Q15758 541 aa3.6□□□□□ -1.83
SCFD1-216ENST00000555550 CDONQ4KMG0 1287 aa3.6□□□□□ -1.83
SCFD1-216ENST00000555550 ARHGAP11AQ6P4F7 1023 aa3.6□□□□□ -1.83
SCFD1-216ENST00000555550 ZNF248Q8NDW4 579 aa3.6□□□□□ -1.83
SCFD1-216ENST00000555550 OR1J2Q8NGS2 313 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms