RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 GOLGA6L3A6NEY3 463 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 AGRPO00253 132 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 TAF4O00268 1085 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 STX7O15400 261 aaKnown RBP10.56□□□□□ -0.72
SHMT2-213ENST00000554600 GRID2O43424 1007 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 SNX2O60749 519 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 DNAJC6O75061 913 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 TCEA3O75764 348 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 ECEL1O95672 775 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 MPOP05164 745 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 ACP5P13686 325 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 GLB1P16278 677 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 ALDH4A1P30038 563 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 SPAM1P38567 509 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 DCDC1P59894 354 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 GABREP78334 506 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 CCL7P80098 99 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 OLIG2Q13516 323 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 LRP8Q14114 963 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 SPARCL1Q14515 664 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 ISXQ2M1V0 245 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 PLA2G4EQ3MJ16 856 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 C3orf38Q5JPI3 329 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 OGFOD3Q6PK18 319 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 CRTC3Q6UUV7 619 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 FAM151BQ6UXP7 276 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 TTC30BQ8N4P2 665 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 ATG4AQ8WYN0 398 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 GLYATL1Q969I3 302 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 SCARF2Q96GP6 870 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-213ENST00000554600 ATXN7L3BQ96GX2 97 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 TTC25Q96NG3 672 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 PPP1R2P1Q96PQ5 205 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 LRRN3Q9H3W5 708 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 OSGEPL1Q9H4B0 414 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 RMI1Q9H9A7 625 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 GRPEL1Q9HAV7 217 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 EPB41L5Q9HCM4 733 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 ATXN10Q9UBB4 475 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 KCNK6Q9Y257 313 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 R3HDM2Q9Y2K5 976 aaKnown RBP10.56□□□□□ -0.72
SHMT2-213ENST00000554600 DMXL2Q8TDJ6 3036 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 C2orf81A6NN90 581 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 D6RAR5 112 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 ZW10O43264 779 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 BRINP1O60477 761 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 MTX2O75431 263 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 ZNF8P17098 575 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-213ENST00000554600 HMGCLP35914 325 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 CCZ1BP86790 482 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 CCZ1P86791 482 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-213ENST00000554600 KLF1Q13351 362 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-213ENST00000554600 GTF2H3Q13889 308 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 HLTFQ14527 1009 aaKnown RBP eCLIP10.55□□□□□ -0.72
SHMT2-213ENST00000554600 RTP5Q14D33 572 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 INSCQ1MX18 579 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 AMZ1Q400G9 498 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 MAP9Q49MG5 647 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 ATP13A5Q4VNC0 1218 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 PDPK2PQ6A1A2 396 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 ARL14Q8N4G2 192 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 C1orf54Q8WWF1 131 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 PLEKHG4BQ96PX9 1271 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 TBL1YQ9BQ87 522 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 GORASP1Q9BQQ3 440 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 TMEM121Q9BTD3 319 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 FOXP3Q9BZS1 431 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 CARD9Q9H257 536 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 TRIM39Q9HCM9 518 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 NFKBIL1Q9UBC1 381 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-213ENST00000554600 DKK4Q9UBT3 224 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 ATXN7L1Q9ULK2 861 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-213ENST00000554600 SATB2Q9UPW6 733 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 ENTPD2Q9Y5L3 495 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 ST14Q9Y5Y6 855 aa10.55□□□□□ -0.72
SHMT2-213ENST00000554600 GLYATL1P3A0A0U1RQE8 302 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 A0A1W2PQM1 296 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 C5orf60A6NFR6 353 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 NUDT21O43809 227 aaKnown RBP10.54□□□□□ -0.72
SHMT2-213ENST00000554600 NUAK1O60285 661 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 UGT1A9O60656 530 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 CDK14O94921 469 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 IFNB1P01574 187 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 CAPNS1P04632 268 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 UGT1A6P19224 532 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 LPOP22079 712 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-213ENST00000554600 UGT1A1P22309 533 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 UGT1A4P22310 534 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 RBMS1P29558 406 aaKnown RBP10.54□□□□□ -0.72
SHMT2-213ENST00000554600 UGT1A3P35503 534 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 UGT1A5P35504 534 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 ACTN2P35609 894 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 LMAN1P49257 510 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 INHBCP55103 352 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 OR1D5P58170 312 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 SNX1Q13596 522 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 PTPRCAPQ14761 206 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 CHRNA6Q15825 494 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 PARP6Q2NL67 630 aa10.54□□□□□ -0.72
SHMT2-213ENST00000554600 P3H1Q32P28 736 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms