RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 ACOT1Q86TX2 421 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 ADIPOR2Q86V24 386 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 FAM90A1Q86YD7 464 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 PLXDC1Q8IUK5 500 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 EXD3Q8N9H8 876 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 OR2T34Q8NGX1 318 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 SLC35B2Q8TB61 432 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 SLC2A14Q8TDB8 520 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 WFIKKN2Q8TEU8 576 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 LRTOMTQ8WZ04 291 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 CCDC127Q96BQ5 260 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 GRAMD1AQ96CP6 724 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 DNAJC19Q96DA6 116 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 TMA16Q96EY4 203 aaKnown RBP5.01□□□□□ -1.61
ATXN3-228ENST00000554592 SERAC1Q96JX3 654 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 SLC46A1Q96NT5 459 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 ABCG4Q9H172 646 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 RSPH9Q9H1X1 276 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-228ENST00000554592 NEUROG2Q9H2A3 272 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 PABPC3Q9H361 631 aaKnown RBP5.01□□□□□ -1.61
ATXN3-228ENST00000554592 ANKMY1Q9P2S6 941 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 AGO1Q9UL18 857 aaKnown RBP5.01□□□□□ -1.61
ATXN3-228ENST00000554592 KIF3AQ9Y496 699 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 ADAMTS9Q9P2N4 1935 aa5.01□□□□□ -1.61
ATXN3-228ENST00000554592 SHROOM3Q8TF72 1996 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 PLXND1Q9Y4D7 1925 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 FRMD3A2A2Y4 597 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 CXorf49A8MYA2 514 aaPredicted RBP5□□□□□ -1.61
ATXN3-228ENST00000554592 C10orf142B7Z368 130 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 HHLA1C9JL84 531 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 TRIM38O00635 465 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 TEX33O43247 280 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 SUV39H1O43463 412 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 FZD7O75084 574 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 CSO75390 466 aaKnown RBP5□□□□□ -1.61
ATXN3-228ENST00000554592 RNASEH2AO75792 299 aaKnown RBP5□□□□□ -1.61
ATXN3-228ENST00000554592 GP1BAP07359 652 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 HMBSP08397 361 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 FAM200BP0CF97 657 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 CKMT1AP12532 417 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 KRT10P13645 584 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 P4HA1P13674 534 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 CCDC130P13994 396 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 IDEP14735 1019 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 GOT1P17174 413 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 POLR2EP19388 210 aaKnown RBP5□□□□□ -1.61
ATXN3-228ENST00000554592 HLA-FP30511 346 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 SLC8A1P32418 973 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 NUDT1P36639 197 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 HARS2P49590 506 aaKnown RBP5□□□□□ -1.61
ATXN3-228ENST00000554592 DUSP3P51452 185 aaPredicted RBP5□□□□□ -1.61
ATXN3-228ENST00000554592 CASP5P51878 434 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 AP3M2P53677 418 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 ST8SIA6P61647 398 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 SNRPFP62306 86 aaKnown RBP5□□□□□ -1.61
ATXN3-228ENST00000554592 HHEXQ03014 270 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 KCNJ12Q14500 433 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 PSMD6Q15008 389 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 SNRNP35Q16560 246 aaKnown RBP5□□□□□ -1.61
ATXN3-228ENST00000554592 ZNF667Q5HYK9 610 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 FNDC7Q5VTL7 733 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 RRAGBQ5VZM2 374 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 Q6ZRM9 215 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 CCDC186Q7Z3E2 898 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 SCD5Q86SK9 330 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 PRPF39Q86UA1 669 aaKnown RBP5□□□□□ -1.61
ATXN3-228ENST00000554592 IQCHQ86VS3 1027 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 UNC93AQ86WB7 457 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 PPP1R3BQ86XI6 285 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 FAM217AQ8IXS0 508 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 ARHGAP18Q8N392 663 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 SLC25A45Q8N413 288 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 ZNF366Q8N895 744 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 DDX51Q8N8A6 666 aaKnown RBP eCLIP5□□□□□ -1.61
ATXN3-228ENST00000554592 PARD3BQ8TEW8 1205 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 ARL8AQ96BM9 186 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 MIEF2Q96C03 454 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 MTFMTQ96DP5 389 aaKnown RBP5□□□□□ -1.61
ATXN3-228ENST00000554592 SORCS2Q96PQ0 1159 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 OMDQ99983 421 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 SEMA3CQ99985 751 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 MRI1Q9BV20 369 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 C1orf43Q9BWL3 253 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 TRIM4Q9C037 500 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 C11orf54Q9H0W9 315 aaPredicted RBP5□□□□□ -1.61
ATXN3-228ENST00000554592 MRPL46Q9H2W6 279 aaKnown RBP5□□□□□ -1.61
ATXN3-228ENST00000554592 WDCPQ9H6R7 721 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 USP29Q9HBJ7 922 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 PNPLA8Q9NP80 782 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 ASCL3Q9NQ33 180 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 STARD5Q9NSY2 213 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 PANK4Q9NVE7 773 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 FEZ2Q9UHY8 353 aaPredicted RBP5□□□□□ -1.61
ATXN3-228ENST00000554592 RASAL2Q9UJF2 1139 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 FZD4Q9ULV1 537 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 PHTF1Q9UMS5 762 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 SCN1AP35498 2009 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 HECTD1Q9ULT8 2610 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 KALRNO60229 2985 aa5□□□□□ -1.61
ATXN3-228ENST00000554592 PTPRBP23467 1997 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms