RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 CXCR5P32302 372 aa20.16■□□□□ 0.82
FOXA1-203ENST00000553751 ACTR1BP42025 376 aa20.16■□□□□ 0.82
FOXA1-203ENST00000553751 ACTR1AP61163 376 aa20.16■□□□□ 0.82
FOXA1-203ENST00000553751 SNX1Q13596 522 aa20.16■□□□□ 0.82
FOXA1-203ENST00000553751 PTPRCAPQ14761 206 aa20.16■□□□□ 0.82
FOXA1-203ENST00000553751 KHDC1Q4VXA5 237 aaKnown RBP20.16■□□□□ 0.82
FOXA1-203ENST00000553751 FAM151BQ6UXP7 276 aa20.16■□□□□ 0.82
FOXA1-203ENST00000553751 ADGRG6Q86SQ4 1221 aa20.16■□□□□ 0.82
FOXA1-203ENST00000553751 TAB3Q8N5C8 712 aaPredicted RBP20.16■□□□□ 0.82
FOXA1-203ENST00000553751 OR6C4Q8NGE1 309 aa20.16■□□□□ 0.82
FOXA1-203ENST00000553751 ZDHHC1Q8WTX9 485 aa20.16■□□□□ 0.82
FOXA1-203ENST00000553751 LRRC40Q9H9A6 602 aa20.16■□□□□ 0.82
FOXA1-203ENST00000553751 TRIM39Q9HCM9 518 aa20.16■□□□□ 0.82
FOXA1-203ENST00000553751 ZNHIT2Q9UHR6 403 aa20.16■□□□□ 0.82
FOXA1-203ENST00000553751 ZNF148Q9UQR1 794 aa20.16■□□□□ 0.82
FOXA1-203ENST00000553751 PKP3Q9Y446 797 aa20.16■□□□□ 0.82
FOXA1-203ENST00000553751 KMT2BQ9UMN6 2715 aaPredicted RBP20.15■□□□□ 0.82
FOXA1-203ENST00000553751 GLYATL1P3A0A0U1RQE8 302 aa20.15■□□□□ 0.82
FOXA1-203ENST00000553751 TRABD2BA6NFA1 517 aa20.15■□□□□ 0.82
FOXA1-203ENST00000553751 GPR39O43194 453 aa20.15■□□□□ 0.82
FOXA1-203ENST00000553751 MTX2O75431 263 aa20.15■□□□□ 0.82
FOXA1-203ENST00000553751 AP2A1O95782 977 aa20.15■□□□□ 0.82
FOXA1-203ENST00000553751 LPOP22079 712 aaPredicted RBP20.15■□□□□ 0.82
FOXA1-203ENST00000553751 CCNG2Q16589 344 aa20.15■□□□□ 0.82
FOXA1-203ENST00000553751 PDCD7Q8N8D1 485 aaKnown RBP20.15■□□□□ 0.82
FOXA1-203ENST00000553751 BRSK1Q8TDC3 778 aa20.15■□□□□ 0.82
FOXA1-203ENST00000553751 ZCCHC14Q8WYQ9 949 aaKnown RBP20.15■□□□□ 0.82
FOXA1-203ENST00000553751 ANP32BQ92688 251 aaKnown RBP20.15■□□□□ 0.82
FOXA1-203ENST00000553751 LRRC45Q96CN5 670 aa20.15■□□□□ 0.82
FOXA1-203ENST00000553751 DEPDC7Q96QD5 511 aa20.15■□□□□ 0.82
FOXA1-203ENST00000553751 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.15■□□□□ 0.82
FOXA1-203ENST00000553751 FEZ2Q9UHY8 353 aaPredicted RBP20.15■□□□□ 0.82
FOXA1-203ENST00000553751 ZKSCAN5Q9Y2L8 839 aa20.15■□□□□ 0.82
FOXA1-203ENST00000553751 KCTD3Q9Y597 815 aa20.15■□□□□ 0.82
FOXA1-203ENST00000553751 RNF215Q9Y6U7 377 aa20.15■□□□□ 0.82
FOXA1-203ENST00000553751 ZFC3H1O60293 1989 aaKnown RBP20.14■□□□□ 0.81
FOXA1-203ENST00000553751 C2orf81A6NN90 581 aa20.14■□□□□ 0.81
FOXA1-203ENST00000553751 GPR89AB7ZAQ6 455 aa20.14■□□□□ 0.81
FOXA1-203ENST00000553751 CHUKO15111 745 aa20.14■□□□□ 0.81
FOXA1-203ENST00000553751 STX7O15400 261 aaKnown RBP20.14■□□□□ 0.81
FOXA1-203ENST00000553751 ZSCAN12O43309 604 aa20.14■□□□□ 0.81
FOXA1-203ENST00000553751 GRID2O43424 1007 aa20.14■□□□□ 0.81
FOXA1-203ENST00000553751 NUDT21O43809 227 aaKnown RBP20.14■□□□□ 0.81
FOXA1-203ENST00000553751 CEP104O60308 925 aa20.14■□□□□ 0.81
FOXA1-203ENST00000553751 IFNB1P01574 187 aa20.14■□□□□ 0.81
FOXA1-203ENST00000553751 GPR89BP0CG08 455 aa20.14■□□□□ 0.81
FOXA1-203ENST00000553751 ACP5P13686 325 aa20.14■□□□□ 0.81
FOXA1-203ENST00000553751 GLB1P16278 677 aa20.14■□□□□ 0.81
FOXA1-203ENST00000553751 CA5AP35218 305 aa20.14■□□□□ 0.81
FOXA1-203ENST00000553751 ZNF140P52738 457 aaPredicted RBP20.14■□□□□ 0.81
FOXA1-203ENST00000553751 MAZP56270 477 aaKnown RBP20.14■□□□□ 0.81
FOXA1-203ENST00000553751 PEX6Q13608 980 aa20.14■□□□□ 0.81
FOXA1-203ENST00000553751 CHRNA6Q15825 494 aa20.14■□□□□ 0.81
FOXA1-203ENST00000553751 ST3GAL2Q16842 350 aa20.14■□□□□ 0.81
FOXA1-203ENST00000553751 DRICH1Q6PGQ1 229 aaPredicted RBP20.14■□□□□ 0.81
FOXA1-203ENST00000553751 CHST15Q7LFX5 561 aaPredicted RBP20.14■□□□□ 0.81
FOXA1-203ENST00000553751 PRUNE1Q86TP1 453 aa20.14■□□□□ 0.81
FOXA1-203ENST00000553751 NAGSQ8N159 534 aa20.14■□□□□ 0.81
FOXA1-203ENST00000553751 GLIS1Q8NBF1 620 aa20.14■□□□□ 0.81
FOXA1-203ENST00000553751 OR4K2Q8NGD2 314 aa20.14■□□□□ 0.81
FOXA1-203ENST00000553751 PATE1Q8WXA2 126 aa20.14■□□□□ 0.81
FOXA1-203ENST00000553751 APPL1Q9UKG1 709 aa20.14■□□□□ 0.81
FOXA1-203ENST00000553751 JRKLQ9Y4A0 524 aa20.14■□□□□ 0.81
FOXA1-203ENST00000553751 PCDHB1Q9Y5F3 818 aa20.14■□□□□ 0.81
FOXA1-203ENST00000553751 APC2O95996 2303 aa20.14■□□□□ 0.81
FOXA1-203ENST00000553751 NTN3O00634 580 aaPredicted RBP20.13■□□□□ 0.81
FOXA1-203ENST00000553751 CSO75390 466 aaKnown RBP20.13■□□□□ 0.81
FOXA1-203ENST00000553751 TCEA3O75764 348 aa20.13■□□□□ 0.81
FOXA1-203ENST00000553751 ECEL1O95672 775 aa20.13■□□□□ 0.81
FOXA1-203ENST00000553751 CRTAMO95727 393 aa20.13■□□□□ 0.81
FOXA1-203ENST00000553751 PNLIPP16233 465 aa20.13■□□□□ 0.81
FOXA1-203ENST00000553751 PDX1P52945 283 aa20.13■□□□□ 0.81
FOXA1-203ENST00000553751 WDR48Q8TAF3 677 aa20.13■□□□□ 0.81
FOXA1-203ENST00000553751 MDM1Q8TC05 714 aa20.13■□□□□ 0.81
FOXA1-203ENST00000553751 MAIP1Q8WWC4 291 aa20.13■□□□□ 0.81
FOXA1-203ENST00000553751 SMOXQ9NWM0 555 aa20.13■□□□□ 0.81
FOXA1-203ENST00000553751 LRIT1Q9P2V4 623 aa20.13■□□□□ 0.81
FOXA1-203ENST00000553751 FKBPLQ9UIM3 349 aa20.13■□□□□ 0.81
FOXA1-203ENST00000553751 KCNK6Q9Y257 313 aa20.13■□□□□ 0.81
FOXA1-203ENST00000553751 BPTFQ12830 3046 aa20.13■□□□□ 0.81
FOXA1-203ENST00000553751 ANKRD11Q6UB99 2663 aaPredicted RBP20.12■□□□□ 0.81
FOXA1-203ENST00000553751 A0A1W2PQM1 296 aa20.12■□□□□ 0.81
FOXA1-203ENST00000553751 PSMD3O43242 534 aa20.12■□□□□ 0.81
FOXA1-203ENST00000553751 LDB2O43679 373 aa20.12■□□□□ 0.81
FOXA1-203ENST00000553751 VEGFDO43915 354 aa20.12■□□□□ 0.81
FOXA1-203ENST00000553751 UGT1A9O60656 530 aa20.12■□□□□ 0.81
FOXA1-203ENST00000553751 PRAMEF1O95521 474 aa20.12■□□□□ 0.81
FOXA1-203ENST00000553751 EML2O95834 649 aa20.12■□□□□ 0.81
FOXA1-203ENST00000553751 RPLP0P05388 317 aaKnown RBP20.12■□□□□ 0.81
FOXA1-203ENST00000553751 ETS1P14921 441 aa20.12■□□□□ 0.81
FOXA1-203ENST00000553751 UGT1A6P19224 532 aa20.12■□□□□ 0.81
FOXA1-203ENST00000553751 UGT1A1P22309 533 aa20.12■□□□□ 0.81
FOXA1-203ENST00000553751 UGT1A4P22310 534 aa20.12■□□□□ 0.81
FOXA1-203ENST00000553751 UGT1A3P35503 534 aa20.12■□□□□ 0.81
FOXA1-203ENST00000553751 UGT1A5P35504 534 aa20.12■□□□□ 0.81
FOXA1-203ENST00000553751 PDE1BQ01064 536 aa20.12■□□□□ 0.81
FOXA1-203ENST00000553751 ITGA9Q13797 1035 aa20.12■□□□□ 0.81
FOXA1-203ENST00000553751 LONRF2Q1L5Z9 754 aa20.12■□□□□ 0.81
FOXA1-203ENST00000553751 ISXQ2M1V0 245 aa20.12■□□□□ 0.81
FOXA1-203ENST00000553751 CRTC3Q6UUV7 619 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms