RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 TMF1P82094 1093 aa5.13□□□□□ -1.59
SYNE2-210ENST00000553455 FOXM1Q08050 763 aa5.13□□□□□ -1.59
SYNE2-210ENST00000553455 AIMP1Q12904 312 aaKnown RBP5.13□□□□□ -1.59
SYNE2-210ENST00000553455 DHX34Q14147 1143 aaKnown RBP5.13□□□□□ -1.59
SYNE2-210ENST00000553455 CTF1Q16619 201 aa5.13□□□□□ -1.59
SYNE2-210ENST00000553455 TDRD12Q587J7 1177 aaKnown RBP5.13□□□□□ -1.59
SYNE2-210ENST00000553455 WDR73Q6P4I2 378 aa5.13□□□□□ -1.59
SYNE2-210ENST00000553455 CCDC190Q86UF4 302 aa5.13□□□□□ -1.59
SYNE2-210ENST00000553455 ZNF575Q86XF7 245 aa5.13□□□□□ -1.59
SYNE2-210ENST00000553455 POMGNT2Q8NAT1 580 aa5.13□□□□□ -1.59
SYNE2-210ENST00000553455 POGLUT1Q8NBL1 392 aa5.13□□□□□ -1.59
SYNE2-210ENST00000553455 OR14A16Q8NHC5 309 aa5.13□□□□□ -1.59
SYNE2-210ENST00000553455 HMGCLL1Q8TB92 370 aa5.13□□□□□ -1.59
SYNE2-210ENST00000553455 PGAP3Q96FM1 320 aaPredicted RBP5.13□□□□□ -1.59
SYNE2-210ENST00000553455 DACH2Q96NX9 599 aa5.13□□□□□ -1.59
SYNE2-210ENST00000553455 GFI1Q99684 422 aa5.13□□□□□ -1.59
SYNE2-210ENST00000553455 BAG1Q99933 345 aaPredicted RBP5.13□□□□□ -1.59
SYNE2-210ENST00000553455 AP1M1Q9BXS5 423 aa5.13□□□□□ -1.59
SYNE2-210ENST00000553455 PPIL3Q9H2H8 161 aaKnown RBP5.13□□□□□ -1.59
SYNE2-210ENST00000553455 SLC35C2Q9NQQ7 365 aa5.13□□□□□ -1.59
SYNE2-210ENST00000553455 C1RLQ9NZP8 487 aa5.13□□□□□ -1.59
SYNE2-210ENST00000553455 CFDP1Q9UEE9 299 aaPredicted RBP5.13□□□□□ -1.59
SYNE2-210ENST00000553455 ZNF148Q9UQR1 794 aa5.13□□□□□ -1.59
SYNE2-210ENST00000553455 TMEM184BQ9Y519 407 aaPredicted RBP5.13□□□□□ -1.59
SYNE2-210ENST00000553455 TRPV2Q9Y5S1 764 aa5.13□□□□□ -1.59
SYNE2-210ENST00000553455 ATXN2Q99700 1313 aaKnown RBP5.13□□□□□ -1.59
SYNE2-210ENST00000553455 A0A0U1RQJ8 604 aa5.12□□□□□ -1.59
SYNE2-210ENST00000553455 LINC01553A4QN01 128 aa5.12□□□□□ -1.59
SYNE2-210ENST00000553455 CLEC18AA5D8T8 446 aa5.12□□□□□ -1.59
SYNE2-210ENST00000553455 FAM90A26D6RGX4 464 aa5.12□□□□□ -1.59
SYNE2-210ENST00000553455 PSMD10O75832 226 aa5.12□□□□□ -1.59
SYNE2-210ENST00000553455 CRYABP02511 175 aaKnown RBP5.12□□□□□ -1.59
SYNE2-210ENST00000553455 UGT1A1P22309 533 aa5.12□□□□□ -1.59
SYNE2-210ENST00000553455 ITGB8P26012 769 aa5.12□□□□□ -1.59
SYNE2-210ENST00000553455 HOXA11P31270 313 aaPredicted RBP5.12□□□□□ -1.59
SYNE2-210ENST00000553455 LMAN1P49257 510 aa5.12□□□□□ -1.59
SYNE2-210ENST00000553455 LIG4P49917 911 aa5.12□□□□□ -1.59
SYNE2-210ENST00000553455 PGGT1BP53609 377 aa5.12□□□□□ -1.59
SYNE2-210ENST00000553455 TAS2R38P59533 333 aa5.12□□□□□ -1.59
SYNE2-210ENST00000553455 UBXN2AP68543 259 aa5.12□□□□□ -1.59
SYNE2-210ENST00000553455 CCDC96Q2M329 555 aa5.12□□□□□ -1.59
SYNE2-210ENST00000553455 FAM133BQ5BKY9 247 aaKnown RBP5.12□□□□□ -1.59
SYNE2-210ENST00000553455 PAPD4Q6PIY7 484 aaKnown RBP5.12□□□□□ -1.59
SYNE2-210ENST00000553455 ADIPOR2Q86V24 386 aa5.12□□□□□ -1.59
SYNE2-210ENST00000553455 CEP97Q8IW35 865 aa5.12□□□□□ -1.59
SYNE2-210ENST00000553455 GUF1Q8N442 669 aaKnown RBP5.12□□□□□ -1.59
SYNE2-210ENST00000553455 CLEC18CQ8NCF0 446 aa5.12□□□□□ -1.59
SYNE2-210ENST00000553455 ACVR1CQ8NER5 493 aa5.12□□□□□ -1.59
SYNE2-210ENST00000553455 WASF1Q92558 559 aa5.12□□□□□ -1.59
SYNE2-210ENST00000553455 CSF3RQ99062 836 aa5.12□□□□□ -1.59
SYNE2-210ENST00000553455 PCYT2Q99447 389 aa5.12□□□□□ -1.59
SYNE2-210ENST00000553455 RTN4RQ9BZR6 473 aa5.12□□□□□ -1.59
SYNE2-210ENST00000553455 SIL1Q9H173 461 aa5.12□□□□□ -1.59
SYNE2-210ENST00000553455 OR10A4Q9H209 315 aa5.12□□□□□ -1.59
SYNE2-210ENST00000553455 DENND2DQ9H6A0 471 aaPredicted RBP5.12□□□□□ -1.59
SYNE2-210ENST00000553455 CCDC177Q9NQR7 707 aaPredicted RBP5.12□□□□□ -1.59
SYNE2-210ENST00000553455 TRMT1Q9NXH9 659 aaKnown RBP5.12□□□□□ -1.59
SYNE2-210ENST00000553455 TAB2Q9NYJ8 693 aa5.12□□□□□ -1.59
SYNE2-210ENST00000553455 C5AR2Q9P296 337 aa5.12□□□□□ -1.59
SYNE2-210ENST00000553455 CRNNQ9UBG3 495 aaPredicted RBP5.12□□□□□ -1.59
SYNE2-210ENST00000553455 ANAPC2Q9UJX6 822 aa5.12□□□□□ -1.59
SYNE2-210ENST00000553455 IGLV5-52A0A0A0MRZ9 124 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 H7C0S8 307 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 SERPINI2O75830 405 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 GH2P01242 217 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 TPOP07202 933 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 ABCB1P08183 1280 aaPredicted RBP5.11□□□□□ -1.59
SYNE2-210ENST00000553455 IGHV4-30-4P0DP06 118 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 HRH2P25021 359 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 CLCNKAP51800 687 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 CLDN20P56880 219 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 PRPF4BQ13523 1007 aaKnown RBP5.11□□□□□ -1.59
SYNE2-210ENST00000553455 IL11RAQ14626 422 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 MVPQ14764 893 aaKnown RBP5.11□□□□□ -1.59
SYNE2-210ENST00000553455 OASLQ15646 514 aaKnown RBP5.11□□□□□ -1.59
SYNE2-210ENST00000553455 ATP13A5Q4VNC0 1218 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 KCNT1Q5JUK3 1230 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 EFHC1Q5JVL4 640 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 DAB2IPQ5VWQ8 1189 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 C18orf63Q68DL7 685 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 BRAT1Q6PJG6 821 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 TMTC2Q8N394 836 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 TDRD5Q8NAT2 981 aaKnown RBP5.11□□□□□ -1.59
SYNE2-210ENST00000553455 SLC38A9Q8NBW4 561 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 GSDMBQ8TAX9 411 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 DDOQ99489 341 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 CMKLR1Q99788 373 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 SF3B5Q9BWJ5 86 aaKnown RBP5.11□□□□□ -1.59
SYNE2-210ENST00000553455 TMEM39BQ9GZU3 492 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 SLCO5A1Q9H2Y9 848 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 HIF1ANQ9NWT6 349 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 TSPYL4Q9UJ04 414 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 DBNLQ9UJU6 430 aaKnown RBP5.11□□□□□ -1.59
SYNE2-210ENST00000553455 MYO6Q9UM54 1294 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 PPIEQ9UNP9 301 aaKnown RBP5.11□□□□□ -1.59
SYNE2-210ENST00000553455 B3GALT5Q9Y2C3 310 aa5.11□□□□□ -1.59
SYNE2-210ENST00000553455 GOLGA6L9A6NEM1 432 aa5.1□□□□□ -1.59
SYNE2-210ENST00000553455 A6NL46 340 aa5.1□□□□□ -1.59
SYNE2-210ENST00000553455 MAGEB17A8MXT2 336 aa5.1□□□□□ -1.59
SYNE2-210ENST00000553455 ANKRD28O15084 1053 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms