RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 TDRD12Q587J7 1177 aaKnown RBP9.28□□□□□ -0.92
CHD8-203ENST00000553283 HENMT1Q5T8I9 393 aaKnown RBP9.28□□□□□ -0.92
CHD8-203ENST00000553283 TIPARPQ7Z3E1 657 aaKnown RBP9.28□□□□□ -0.92
CHD8-203ENST00000553283 AVL9Q8NBF6 648 aa9.28□□□□□ -0.92
CHD8-203ENST00000553283 KCTD6Q8NC69 237 aa9.28□□□□□ -0.92
CHD8-203ENST00000553283 CCHCR1Q8TD31 782 aa9.28□□□□□ -0.92
CHD8-203ENST00000553283 MLPHQ9BV36 600 aaPredicted RBP9.28□□□□□ -0.92
CHD8-203ENST00000553283 CARD9Q9H257 536 aa9.28□□□□□ -0.92
CHD8-203ENST00000553283 TRIT1Q9H3H1 467 aaKnown RBP9.28□□□□□ -0.92
CHD8-203ENST00000553283 EPB41L1Q9H4G0 881 aa9.28□□□□□ -0.92
CHD8-203ENST00000553283 PKD2L2Q9NZM6 624 aa9.28□□□□□ -0.92
CHD8-203ENST00000553283 CPNE7Q9UBL6 633 aa9.28□□□□□ -0.92
CHD8-203ENST00000553283 TTLL3Q9Y4R7 772 aa9.28□□□□□ -0.92
CHD8-203ENST00000553283 TMEM184BQ9Y519 407 aaPredicted RBP9.28□□□□□ -0.92
CHD8-203ENST00000553283 A0A087X0T9 212 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 A0A1W2PQJ5 194 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 ANKRD66B4E2M5 251 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 POLR1CO15160 346 aaPredicted RBP9.27□□□□□ -0.93
CHD8-203ENST00000553283 GRID2O43424 1007 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 NUAK1O60285 661 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 STK17BO94768 372 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 SERPINC1P01008 464 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 JCHAINP01591 159 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 SERPING1P05155 500 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 MMP2P08253 660 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 ANKRD34CP0C6C1 535 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 FAM228BP0C875 321 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 PRKAR1AP10644 381 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 XRCC1P18887 633 aaPredicted RBP9.27□□□□□ -0.93
CHD8-203ENST00000553283 CASRP41180 1078 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 MAPK9P45984 424 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 CLCNKAP51800 687 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 MC1RQ01726 317 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 GBE1Q04446 702 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 SRSF1Q07955 248 aaKnown RBP eCLIP9.27□□□□□ -0.93
CHD8-203ENST00000553283 CDC20Q12834 499 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 SLC10A2Q12908 348 aaPredicted RBP9.27□□□□□ -0.93
CHD8-203ENST00000553283 NFKBIBQ15653 356 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 SKIDA1Q1XH10 827 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 CRTC2Q53ET0 693 aaPredicted RBP9.27□□□□□ -0.93
CHD8-203ENST00000553283 ALKBH5Q6P6C2 394 aaKnown RBP9.27□□□□□ -0.93
CHD8-203ENST00000553283 KDELC2Q7Z4H8 507 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 PLXDC1Q8IUK5 500 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 MAP7D3Q8IWC1 876 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 UNC5BQ8IZJ1 945 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 PQLC3Q8N755 202 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 C9orf43Q8TAL5 461 aaPredicted RBP9.27□□□□□ -0.93
CHD8-203ENST00000553283 LRRN4Q8WUT4 740 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 APOBEC4Q8WW27 367 aaKnown RBP9.27□□□□□ -0.93
CHD8-203ENST00000553283 FAF2Q96CS3 445 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 PLEKHG4BQ96PX9 1271 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 ZNF670Q9BS34 389 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 ADGRE3Q9BY15 652 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 EPN3Q9H201 632 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 UCK1Q9HA47 277 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 TRIM39Q9HCM9 518 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 APMAPQ9HDC9 416 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 PRDM8Q9NQV8 689 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 TMEM63CQ9P1W3 806 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 ATXN10Q9UBB4 475 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 KLHL3Q9UH77 587 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 ANAPC2Q9UJX6 822 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 ADGRG1Q9Y653 693 aa9.27□□□□□ -0.93
CHD8-203ENST00000553283 LILRA5A6NI73 299 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 GPR89AB7ZAQ6 455 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 PROSCO94903 275 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 DLGAP3O95886 979 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 C9P02748 559 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 GPR89BP0CG08 455 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 ZNF8P17098 575 aaPredicted RBP9.26□□□□□ -0.93
CHD8-203ENST00000553283 OAS2P29728 719 aaKnown RBP9.26□□□□□ -0.93
CHD8-203ENST00000553283 GJC1P36383 396 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 ANP32AP39687 249 aaKnown RBP9.26□□□□□ -0.93
CHD8-203ENST00000553283 PBX1P40424 430 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 CD86P42081 329 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 STAT5AP42229 794 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 NOP2P46087 812 aaKnown RBP9.26□□□□□ -0.93
CHD8-203ENST00000553283 UBE2IP63279 158 aaKnown RBP9.26□□□□□ -0.93
CHD8-203ENST00000553283 FOXK1P85037 733 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 ZBED6P86452 979 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 MAP7Q14244 749 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 IQCB1Q15051 598 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 DEFB109BQ30KR1 87 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 ZNF648Q5T619 568 aaPredicted RBP9.26□□□□□ -0.93
CHD8-203ENST00000553283 CPNE8Q86YQ8 564 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 PHYKPLQ8IUZ5 450 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 CCDC13Q8IYE1 715 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 ESX1Q8N693 406 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 CNTD1Q8N815 330 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 CCNYQ8ND76 341 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 STARD8Q92502 1023 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 EID2BQ96D98 161 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 HDAC11Q96DB2 347 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 ABHD17AQ96GS6 310 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 C9orf72Q96LT7 481 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 SPATA16Q9BXB7 569 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 TBC1D10AQ9BXI6 508 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 OR2AG1Q9H205 316 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 ZFYVE1Q9HBF4 777 aa9.26□□□□□ -0.93
CHD8-203ENST00000553283 ZNF71Q9NQZ8 489 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms