RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.39■■□□□ 1.01
SMARCD1-212ENST00000551966 SLC30A1Q9Y6M5 507 aa21.39■■□□□ 1.01
SMARCD1-212ENST00000551966 USP9XQ93008 2570 aaPredicted RBP21.38■■□□□ 1.01
SMARCD1-212ENST00000551966 LILRA5A6NI73 299 aa21.38■■□□□ 1.01
SMARCD1-212ENST00000551966 DDX3XO00571 662 aaKnown RBP eCLIP21.38■■□□□ 1.013e-10■■■■□ 20.8
SMARCD1-212ENST00000551966 GRID2O43424 1007 aa21.38■■□□□ 1.01
SMARCD1-212ENST00000551966 NUAK1O60285 661 aa21.38■■□□□ 1.01
SMARCD1-212ENST00000551966 GZMAP12544 262 aa21.38■■□□□ 1.01
SMARCD1-212ENST00000551966 EPHB1P54762 984 aa21.38■■□□□ 1.01
SMARCD1-212ENST00000551966 HENMT1Q5T8I9 393 aaKnown RBP21.38■■□□□ 1.01
SMARCD1-212ENST00000551966 ALG1LQ6GMV1 187 aa21.38■■□□□ 1.01
SMARCD1-212ENST00000551966 RAVER1Q8IY67 606 aaKnown RBP21.38■■□□□ 1.01
SMARCD1-212ENST00000551966 ARRDC2Q8TBH0 407 aa21.38■■□□□ 1.01
SMARCD1-212ENST00000551966 TDRD1Q9BXT4 1180 aaKnown RBP21.38■■□□□ 1.01
SMARCD1-212ENST00000551966 POLR1EQ9GZS1 481 aaKnown RBP21.38■■□□□ 1.01
SMARCD1-212ENST00000551966 HAUS4Q9H6D7 363 aa21.38■■□□□ 1.01
SMARCD1-212ENST00000551966 MYO1AQ9UBC5 1043 aa21.38■■□□□ 1.01
SMARCD1-212ENST00000551966 ADGRG1Q9Y653 693 aa21.38■■□□□ 1.01
SMARCD1-212ENST00000551966 OR5K4A6NMS3 321 aa21.37■■□□□ 1.01
SMARCD1-212ENST00000551966 KATNA1O75449 491 aa21.37■■□□□ 1.01
SMARCD1-212ENST00000551966 KIAA0754O94854 1291 aa21.37■■□□□ 1.01
SMARCD1-212ENST00000551966 SLC2A4P14672 509 aa21.37■■□□□ 1.01
SMARCD1-212ENST00000551966 TYRP1P17643 537 aa21.37■■□□□ 1.01
SMARCD1-212ENST00000551966 LEPRP48357 1165 aaKnown RBP21.37■■□□□ 1.01
SMARCD1-212ENST00000551966 SPINT3P49223 89 aa21.37■■□□□ 1.01
SMARCD1-212ENST00000551966 SEPHS1P49903 392 aa21.37■■□□□ 1.01
SMARCD1-212ENST00000551966 NIPAL4Q0D2K0 466 aa21.37■■□□□ 1.01
SMARCD1-212ENST00000551966 ZNF648Q5T619 568 aaPredicted RBP21.37■■□□□ 1.01
SMARCD1-212ENST00000551966 ANKRD20A12PQ8NF67 263 aa21.37■■□□□ 1.01
SMARCD1-212ENST00000551966 ZNF653Q96CK0 615 aa21.37■■□□□ 1.01
SMARCD1-212ENST00000551966 ELMO2Q96JJ3 720 aa21.37■■□□□ 1.01
SMARCD1-212ENST00000551966 OR6C1Q96RD1 312 aa21.37■■□□□ 1.01
SMARCD1-212ENST00000551966 LYSMD1Q96S90 227 aa21.37■■□□□ 1.01
SMARCD1-212ENST00000551966 FAM83DQ9H4H8 585 aa21.37■■□□□ 1.01
SMARCD1-212ENST00000551966 UCK1Q9HA47 277 aa21.37■■□□□ 1.01
SMARCD1-212ENST00000551966 ZNF624Q9P2J8 865 aaPredicted RBP21.37■■□□□ 1.01
SMARCD1-212ENST00000551966 ATXN10Q9UBB4 475 aa21.37■■□□□ 1.01
SMARCD1-212ENST00000551966 MYO6Q9UM54 1294 aa21.37■■□□□ 1.01
SMARCD1-212ENST00000551966 POLHQ9Y253 713 aa21.37■■□□□ 1.01
SMARCD1-212ENST00000551966 LRRC53A6NM62 1247 aa21.36■■□□□ 1.01
SMARCD1-212ENST00000551966 ZNF8P17098 575 aaPredicted RBP21.36■■□□□ 1.01
SMARCD1-212ENST00000551966 XRCC1P18887 633 aaPredicted RBP21.36■■□□□ 1.01
SMARCD1-212ENST00000551966 CDK11BP21127 795 aaKnown RBP21.36■■□□□ 1.01
SMARCD1-212ENST00000551966 SERPINB6P35237 376 aa21.36■■□□□ 1.01
SMARCD1-212ENST00000551966 SLC19A1P41440 591 aa21.36■■□□□ 1.01
SMARCD1-212ENST00000551966 CLCNKAP51800 687 aa21.36■■□□□ 1.01
SMARCD1-212ENST00000551966 MMRN1Q13201 1228 aa21.36■■□□□ 1.01
SMARCD1-212ENST00000551966 E4F1Q66K89 784 aaPredicted RBP21.36■■□□□ 1.01
SMARCD1-212ENST00000551966 TMEM26Q6ZUK4 368 aa21.36■■□□□ 1.01
SMARCD1-212ENST00000551966 MAML1Q92585 1016 aa21.36■■□□□ 1.01
SMARCD1-212ENST00000551966 TGM7Q96PF1 710 aa21.36■■□□□ 1.01
SMARCD1-212ENST00000551966 CARD9Q9H257 536 aa21.36■■□□□ 1.01
SMARCD1-212ENST00000551966 ARFGAP3Q9NP61 516 aa21.36■■□□□ 1.01
SMARCD1-212ENST00000551966 KLC4Q9NSK0 619 aa21.36■■□□□ 1.01
SMARCD1-212ENST00000551966 DTLQ9NZJ0 730 aa21.36■■□□□ 1.01
SMARCD1-212ENST00000551966 PLEKHB1Q9UF11 243 aaPredicted RBP21.36■■□□□ 1.01
SMARCD1-212ENST00000551966 SLC23A2Q9UGH3 650 aa21.36■■□□□ 1.01
SMARCD1-212ENST00000551966 SCINQ9Y6U3 715 aa21.36■■□□□ 1.01
SMARCD1-212ENST00000551966 CDC14CA4D256 554 aa21.35■■□□□ 1.01
SMARCD1-212ENST00000551966 GOLGA6L3A6NEY3 463 aa21.35■■□□□ 1.01
SMARCD1-212ENST00000551966 KIF1CO43896 1103 aaKnown RBP21.35■■□□□ 1.01
SMARCD1-212ENST00000551966 CREG1O75629 220 aa21.35■■□□□ 1.01
SMARCD1-212ENST00000551966 RFPL1O75677 317 aa21.35■■□□□ 1.01
SMARCD1-212ENST00000551966 UBXN7O94888 489 aa21.35■■□□□ 1.01
SMARCD1-212ENST00000551966 NDUFA10O95299 355 aa21.35■■□□□ 1.01
SMARCD1-212ENST00000551966 GNLYP22749 145 aa21.35■■□□□ 1.01
SMARCD1-212ENST00000551966 NOP2P46087 812 aaKnown RBP21.35■■□□□ 1.01
SMARCD1-212ENST00000551966 IL11RAQ14626 422 aa21.35■■□□□ 1.01
SMARCD1-212ENST00000551966 CAPRIN2Q6IMN6 1127 aaKnown RBP21.35■■□□□ 1.01
SMARCD1-212ENST00000551966 RBM43Q6ZSC3 357 aaKnown RBP21.35■■□□□ 1.01
SMARCD1-212ENST00000551966 LRRC49Q8IUZ0 686 aa21.35■■□□□ 1.01
SMARCD1-212ENST00000551966 AOPEPQ8N6M6 819 aa21.35■■□□□ 1.01
SMARCD1-212ENST00000551966 LPCAT1Q8NF37 534 aa21.35■■□□□ 1.01
SMARCD1-212ENST00000551966 LRRN4Q8WUT4 740 aa21.35■■□□□ 1.01
SMARCD1-212ENST00000551966 EID2BQ96D98 161 aa21.35■■□□□ 1.01
SMARCD1-212ENST00000551966 ZNF768Q9H5H4 540 aaKnown RBP21.35■■□□□ 1.01
SMARCD1-212ENST00000551966 RBM22Q9NW64 420 aaKnown RBP eCLIP21.35■■□□□ 1.01
SMARCD1-212ENST00000551966 DNPEPQ9ULA0 475 aa21.35■■□□□ 1.01
SMARCD1-212ENST00000551966 C1orf232A0A0U1RR37 186 aa21.34■■□□□ 1.01
SMARCD1-212ENST00000551966 MATN3O15232 486 aa21.34■■□□□ 1.01
SMARCD1-212ENST00000551966 TOX3O15405 576 aaPredicted RBP21.34■■□□□ 1.01
SMARCD1-212ENST00000551966 SPAG6O75602 509 aa21.34■■□□□ 1.01
SMARCD1-212ENST00000551966 DNAJB5O75953 348 aa21.34■■□□□ 1.01
SMARCD1-212ENST00000551966 CD48P09326 243 aa21.34■■□□□ 1.01
SMARCD1-212ENST00000551966 FGF5P12034 268 aa21.34■■□□□ 1.01
SMARCD1-212ENST00000551966 CES1P23141 567 aa21.34■■□□□ 1.01
SMARCD1-212ENST00000551966 GARSP41250 739 aaKnown RBP21.34■■□□□ 1.01
SMARCD1-212ENST00000551966 PMS2P54278 862 aa21.34■■□□□ 1.01
SMARCD1-212ENST00000551966 MYL5Q02045 173 aa21.34■■□□□ 1.01
SMARCD1-212ENST00000551966 RASGRP3Q8IV61 690 aa21.34■■□□□ 1.01
SMARCD1-212ENST00000551966 TEKT4Q8WW24 435 aa21.34■■□□□ 1.01
SMARCD1-212ENST00000551966 STAMBPL1Q96FJ0 436 aa21.34■■□□□ 1.01
SMARCD1-212ENST00000551966 TRIM55Q9BYV6 548 aa21.34■■□□□ 1.01
SMARCD1-212ENST00000551966 TWSG1Q9GZX9 223 aa21.34■■□□□ 1.01
SMARCD1-212ENST00000551966 OR2AG1Q9H205 316 aa21.34■■□□□ 1.01
SMARCD1-212ENST00000551966 AKIRIN1Q9H9L7 192 aaPredicted RBP21.34■■□□□ 1.01
SMARCD1-212ENST00000551966 PCDH9Q9HC56 1237 aa21.34■■□□□ 1.01
SMARCD1-212ENST00000551966 MRPL47Q9HD33 250 aaKnown RBP21.34■■□□□ 1.01
SMARCD1-212ENST00000551966 AIPL1Q9NZN9 384 aa21.34■■□□□ 1.01
SMARCD1-212ENST00000551966 CHMP5Q9NZZ3 219 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms