RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 FAM92AA1XBS5 289 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 CCDC151A5D8V7 595 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 TBC1D3BA6NDS4 549 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 TBC1D3FA6NER0 549 aaPredicted RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 TBC1D3LB9A6J9 549 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 PRRT4C9JH25 899 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 INO80B-WBP1J3KQ70 363 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 AP4M1O00189 453 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 CTIFO43310 598 aaKnown RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 DHHO43323 396 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 JAK2O60674 1132 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 TADA2AO75478 443 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 DEXIO95424 95 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 EGFP01133 1207 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 TK1P04183 234 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 ERBB2P04626 1255 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 IL6RP08887 468 aaPredicted RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 NPSP0C0P6 89 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 TBC1D3HP0C7X1 549 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 HKR1P10072 659 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 CEACAM1P13688 526 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 ARSAP15289 507 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 ZNF20P17024 532 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 TYMPP19971 482 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 CYP3A5P20815 502 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 MUTP22033 750 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 U2AF2P26368 475 aaKnown RBP eCLIP2.48□□□□□ -2.016e-8■■■■□ 21.5
CPSF6-207ENST00000551516 ZFP36P26651 326 aaKnown RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 GDI1P31150 447 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 RPL9P32969 192 aaKnown RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 HOXD13P35453 343 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 MPLP40238 635 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 P2RY2P41231 377 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 TNFSF9P41273 254 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 PTGER3P43115 390 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 PNLIPRP1P54315 467 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 TXNL4AP83876 142 aaKnown RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 RNASELQ05823 741 aaKnown RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 CCDC15Q0P6D6 951 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 TWF1Q12792 350 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 ELAVL2Q12926 359 aaKnown RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 FOXE3Q13461 319 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 SIM2Q14190 667 aaPredicted RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 MYBPC2Q14324 1141 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 ZNF268Q14587 947 aaPredicted RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 NONOQ15233 471 aaKnown RBP eCLIP2.48□□□□□ -2.012e-6■■■□□ 18.6
CPSF6-207ENST00000551516 MAPRE1Q15691 268 aaKnown RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 SMAD1Q15797 465 aaKnown RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 ZNF77Q15935 545 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 LSM12Q3MHD2 195 aaKnown RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 TBRG1Q3YBR2 411 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 SPATS1Q496A3 300 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 FBLN7Q53RD9 439 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 XKR9Q5GH70 373 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 PPM1LQ5SGD2 360 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 SPATA1Q5VX52 437 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 ANKRD40Q6AI12 368 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 TBC1D3GQ6DHY5 549 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 TBC1D3CQ6IPX1 549 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 RETSATQ6NUM9 610 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 FAM171BQ6P995 826 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 CCNI2Q6ZMN8 369 aaPredicted RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 PIK3AP1Q6ZUJ8 805 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 PTCHD4Q6ZW05 846 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 SYT13Q7L8C5 426 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 ZNF551Q7Z340 670 aaPredicted RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 WDR53Q7Z5U6 358 aaPredicted RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 GLRX5Q86SX6 157 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 LRRTM4Q86VH4 590 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 TBC1D3Q8IZP1 549 aaPredicted RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 METTL25Q8N6Q8 603 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 FAM71DQ8N9W8 422 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 PPHLN1Q8NEY8 458 aaKnown RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 ABHD11Q8NFV4 315 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 CEP70Q8NHQ1 597 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 RP9Q8TA86 221 aaKnown RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 URGCPQ8TCY9 931 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 BICD2Q8TD16 824 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 CACTINQ8WUQ7 758 aaKnown RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 TCP11Q8WWU5 503 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 ASB10Q8WXI3 467 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 TFAP2BQ92481 460 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 CAVIN3Q969G5 261 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 WBP2Q969T9 261 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 VOPP1Q96AW1 172 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 MSANTD3Q96H12 275 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 PPM1MQ96MI6 270 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 JAKMIP1Q96N16 626 aaKnown RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 JPH2Q9BR39 696 aaPredicted RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 CINPQ9BW66 212 aaPredicted RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 SCNM1Q9BWG6 230 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 SLC26A6Q9BXS9 759 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 TRIM9Q9C026 710 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 TWSG1Q9GZX9 223 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 ARRDC1-AS1Q9H2J1 176 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 TTC12Q9H892 705 aaPredicted RBP2.48□□□□□ -2.01
CPSF6-207ENST00000551516 PLEKHA5Q9HAU0 1116 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 CYP4F11Q9HBI6 524 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 TUFT1Q9NNX1 390 aa2.48□□□□□ -2.01
CPSF6-207ENST00000551516 WASH6PQ9NQA3 447 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms