RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 SPATA4Q8NEY3 305 aa13.35□□□□□ -0.27
NUP188-211ENST00000550219 ZDHHC1Q8WTX9 485 aa13.35□□□□□ -0.27
NUP188-211ENST00000550219 TFB1MQ8WVM0 346 aaKnown RBP13.35□□□□□ -0.27
NUP188-211ENST00000550219 PATE1Q8WXA2 126 aa13.35□□□□□ -0.27
NUP188-211ENST00000550219 SMIM14Q96QK8 99 aa13.35□□□□□ -0.27
NUP188-211ENST00000550219 SEMA3CQ99985 751 aa13.35□□□□□ -0.27
NUP188-211ENST00000550219 FAM118BQ9BPY3 351 aa13.35□□□□□ -0.27
NUP188-211ENST00000550219 FRMD8Q9BZ67 464 aaPredicted RBP13.35□□□□□ -0.27
NUP188-211ENST00000550219 SEMA4CQ9C0C4 833 aa13.35□□□□□ -0.27
NUP188-211ENST00000550219 RDH14Q9HBH5 336 aa13.35□□□□□ -0.27
NUP188-211ENST00000550219 SPATS2LQ9NUQ6 558 aaKnown RBP13.35□□□□□ -0.27
NUP188-211ENST00000550219 APPL1Q9UKG1 709 aa13.35□□□□□ -0.27
NUP188-211ENST00000550219 SMG1Q96Q15 3661 aaKnown RBP13.35□□□□□ -0.27
NUP188-211ENST00000550219 FASNP49327 2511 aaKnown RBP13.34□□□□□ -0.27
NUP188-211ENST00000550219 PRAMEF33A0A0G2JMD5 474 aa13.34□□□□□ -0.27
NUP188-211ENST00000550219 RHPN2P1A8MT19 583 aa13.34□□□□□ -0.27
NUP188-211ENST00000550219 H7C0C1 242 aa13.34□□□□□ -0.27
NUP188-211ENST00000550219 PRAMEF10O60809 474 aa13.34□□□□□ -0.27
NUP188-211ENST00000550219 CEACAM5P06731 702 aa13.34□□□□□ -0.27
NUP188-211ENST00000550219 ALDH4A1P30038 563 aa13.34□□□□□ -0.27
NUP188-211ENST00000550219 ETV5P41161 510 aa13.34□□□□□ -0.27
NUP188-211ENST00000550219 GPR1P46091 355 aa13.34□□□□□ -0.27
NUP188-211ENST00000550219 ATP5OP48047 213 aa13.34□□□□□ -0.27
NUP188-211ENST00000550219 FNTAP49354 379 aa13.34□□□□□ -0.27
NUP188-211ENST00000550219 PPM1FP49593 454 aaPredicted RBP13.34□□□□□ -0.27
NUP188-211ENST00000550219 EPHB1P54762 984 aa13.34□□□□□ -0.27
NUP188-211ENST00000550219 OR1D5P58170 312 aa13.34□□□□□ -0.27
NUP188-211ENST00000550219 LRRC66Q68CR7 880 aa13.34□□□□□ -0.27
NUP188-211ENST00000550219 TIGD7Q6NT04 549 aaPredicted RBP13.34□□□□□ -0.27
NUP188-211ENST00000550219 TTC27Q6P3X3 843 aa13.34□□□□□ -0.27
NUP188-211ENST00000550219 DARS2Q6PI48 645 aaKnown RBP13.34□□□□□ -0.27
NUP188-211ENST00000550219 RFLNAQ6ZTI6 216 aa13.34□□□□□ -0.27
NUP188-211ENST00000550219 MARK2Q7KZI7 788 aaKnown RBP13.34□□□□□ -0.27
NUP188-211ENST00000550219 TMPRSS9Q7Z410 1059 aa13.34□□□□□ -0.27
NUP188-211ENST00000550219 CDKL3Q8IVW4 592 aaPredicted RBP13.34□□□□□ -0.27
NUP188-211ENST00000550219 CCDC13Q8IYE1 715 aa13.34□□□□□ -0.27
NUP188-211ENST00000550219 TEX26Q8N6G2 289 aa13.34□□□□□ -0.27
NUP188-211ENST00000550219 CCNYQ8ND76 341 aa13.34□□□□□ -0.27
NUP188-211ENST00000550219 TTC9Q92623 222 aa13.34□□□□□ -0.27
NUP188-211ENST00000550219 MAGOHBQ96A72 148 aaKnown RBP13.34□□□□□ -0.27
NUP188-211ENST00000550219 CCNL2Q96S94 520 aaPredicted RBP13.34□□□□□ -0.27
NUP188-211ENST00000550219 TEX101Q9BY14 249 aa13.34□□□□□ -0.27
NUP188-211ENST00000550219 SEMA6CQ9H3T2 930 aa13.34□□□□□ -0.27
NUP188-211ENST00000550219 TAAR2Q9P1P5 351 aa13.34□□□□□ -0.27
NUP188-211ENST00000550219 KIF26BQ2KJY2 2108 aa13.34□□□□□ -0.27
NUP188-211ENST00000550219 PSMD11O00231 422 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 MTSS1O43312 755 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 NUDT21O43809 227 aaKnown RBP13.33□□□□□ -0.28
NUP188-211ENST00000550219 ECEL1O95672 775 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 FUCA1P04066 466 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 PDHA1P08559 390 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 PNLIPP16233 465 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 RBL1P28749 1068 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 STIP1P31948 543 aaKnown RBP13.33□□□□□ -0.28
NUP188-211ENST00000550219 COILP38432 576 aaPredicted RBP13.33□□□□□ -0.28
NUP188-211ENST00000550219 ACTR1BP42025 376 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 ACTR1AP61163 376 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 IFI35P80217 286 aaPredicted RBP13.33□□□□□ -0.28
NUP188-211ENST00000550219 DSC2Q02487 901 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 WASHC5Q12768 1159 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 SNX1Q13596 522 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 B4GALNT4Q76KP1 1039 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 VASH2Q86V25 355 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 NRROSQ86YC3 692 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 SLITRK4Q8IW52 837 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 NDUFAF2Q8N183 169 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 GPBAR1Q8TDU6 330 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 LRRN4Q8WUT4 740 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 SPOCK2Q92563 424 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 SLCO2A1Q92959 643 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 AP2M1Q96CW1 435 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 RTP4Q96DX8 246 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 SCRN2Q96FV2 425 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 MCCC1Q96RQ3 725 aaPredicted RBP13.33□□□□□ -0.28
NUP188-211ENST00000550219 CMKLR1Q99788 373 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 NUDT22Q9BRQ3 303 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 POLR1EQ9GZS1 481 aaKnown RBP13.33□□□□□ -0.28
NUP188-211ENST00000550219 CDH19Q9H159 772 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 KCTD5Q9NXV2 234 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 FOXJ2Q9P0K8 574 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 PCYOX1Q9UHG3 505 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 TMEM98Q9Y2Y6 226 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 PLEKHM1Q9Y4G2 1056 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 PCDHGA7Q9Y5G6 932 aa13.33□□□□□ -0.28
NUP188-211ENST00000550219 C5orf60A6NFR6 353 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 INPP4BO15327 924 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 FGF1P05230 155 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 LIPCP11150 499 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 ADCY8P40145 1251 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 KCNJ1P48048 391 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 B4GALNT1Q00973 533 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 CTBSQ01459 385 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 ZFP36L1Q07352 338 aaKnown RBP13.32□□□□□ -0.28
NUP188-211ENST00000550219 AP1B1Q10567 949 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 C16orf72Q14CZ0 275 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 TEX44Q53QW1 395 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 RALGPS1Q5JS13 557 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 USP53Q70EK8 1073 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 PIM3Q86V86 326 aa13.32□□□□□ -0.28
NUP188-211ENST00000550219 ZFAND4Q86XD8 727 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms