RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 PARVBQ9HBI1 364 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 SMPD4Q9NXE4 827 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 ADGRE2Q9UHX3 823 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 PNMA8BQ9ULN7 279 aaPredicted RBP9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 TPRKBQ9Y3C4 175 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 NUP205Q92621 2012 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 DCLK1O15075 740 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 NOBOXO60393 691 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 SNAP29O95721 258 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 CYBBP04839 570 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 HOXB8P17481 243 aaPredicted RBP9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 MTPNP58546 118 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 TSNQ15631 228 aaKnown RBP9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 CYP4V2Q6ZWL3 525 aaPredicted RBP9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 SYTL1Q8IYJ3 562 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 OR2T12Q8NG77 320 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 ZBED2Q9BTP6 218 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 BPIFA1Q9NP55 256 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 ACTR3BQ9P1U1 418 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 KLQ9UEF7 1012 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 CBX4O00257 560 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 AURKAO14965 403 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 FTH1P02794 183 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 DIO3P55073 304 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 DEFA1P59665 94 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 DEFA3P59666 94 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 RPL38P63173 70 aaKnown RBP9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 LCP2Q13094 533 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 ARHGEF7Q14155 803 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 RAB39AQ14964 217 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 DEFB115Q30KQ5 88 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 FGD3Q5JSP0 725 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 GALNT5Q7Z7M9 940 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 DCP1BQ8IZD4 617 aaKnown RBP9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 PACRGLQ8N7B6 248 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 LEMD2Q8NC56 503 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 SCAMP5Q8TAC9 235 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 TRIM54Q9BYV2 358 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 RNF208Q9H0X6 261 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 ACTR8Q9H981 624 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 USE1Q9NZ43 259 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 PTBP2Q9UKA9 531 aaKnown RBP9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 TBC1D30Q9Y2I9 924 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 PTCH2Q9Y6C5 1203 aa9.44□□□□□ -0.9
CALCOCO1-210ENST00000548263 CLDN25C9JDP6 229 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 MLYCDO95822 493 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 ALOX12P18054 663 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 CD68P34810 354 aaPredicted RBP9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 INPP1P49441 399 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 CRYBB1P53674 252 aaPredicted RBP9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 CTXN3Q4LDR2 81 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 UGT3A1Q6NUS8 523 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 PROSER1Q86XN7 944 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 SLC15A3Q8IY34 581 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 CENPSQ8N2Z9 138 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 ATAD1Q8NBU5 361 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 CENPIQ92674 756 aaPredicted RBP9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 KHSRPQ92945 711 aaKnown RBP eCLIP9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 TAMM41Q96BW9 452 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 CLPBQ9H078 707 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 SLC25A51Q9H1U9 297 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 CCM2LQ9NUG4 571 aaPredicted RBP9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 GMPR2Q9P2T1 348 aaKnown RBP9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 ZNHIT2Q9UHR6 403 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 LOC100506127A0A0U1RQW1 187 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 SMIM35A0A1B0GVV1 85 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 F8W810 466 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 GSNP06396 782 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 UMPSP11172 480 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 HERVK_113P63132 956 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 EPS8Q12929 822 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 PAGE2Q7Z2X7 111 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 ZC3H7AQ8IWR0 971 aaKnown RBP9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 POC5Q8NA72 575 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 ZNF540Q8NDQ6 660 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 NCSTNQ92542 709 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 ERVK-6Q9BXR3 956 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 MAGEL2Q9UJ55 1249 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 PDE10AQ9Y233 779 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 KCTD3Q9Y597 815 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 NPEPPSL1A6NEC2 478 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 ARL5CA6NH57 179 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 LRRC14BA6NHZ5 514 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 F5H5T6 163 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 OR4F21O95013 312 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 BMP10O95393 424 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 CPSF4O95639 269 aaKnown RBP9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 HIST1H2AGP0C0S8 130 aaPredicted RBP9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 HIST1H2ADP20671 130 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 GRB7Q14451 532 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 RBM12BQ8IXT5 1001 aaKnown RBP9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 NKAPQ8N5F7 415 aaKnown RBP9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 SETD9Q8NE22 299 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 RAB2BQ8WUD1 216 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 CAPSLQ8WWF8 208 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 TRIB2Q92519 343 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 HTRA1Q92743 480 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 HIST1H2AHQ96KK5 128 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 ZNF597Q96LX8 424 aa9.43□□□□□ -0.9
CALCOCO1-210ENST00000548263 MUS81Q96NY9 551 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms