RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 CRTAMO95727 393 aa18.54■□□□□ 0.56
PRPF40B-206ENST00000547764 ZNF8P17098 575 aaPredicted RBP18.54■□□□□ 0.56
PRPF40B-206ENST00000547764 TPH1P17752 444 aa18.54■□□□□ 0.56
PRPF40B-206ENST00000547764 RPL22P35268 128 aaKnown RBP18.54■□□□□ 0.56
PRPF40B-206ENST00000547764 INSM1Q01101 510 aaPredicted RBP18.54■□□□□ 0.56
PRPF40B-206ENST00000547764 PERM1Q5SV97 790 aa18.54■□□□□ 0.56
PRPF40B-206ENST00000547764 HES3Q5TGS1 186 aa18.54■□□□□ 0.56
PRPF40B-206ENST00000547764 ADGRG6Q86SQ4 1221 aa18.54■□□□□ 0.56
PRPF40B-206ENST00000547764 PHYKPLQ8IUZ5 450 aa18.54■□□□□ 0.56
PRPF40B-206ENST00000547764 GPR156Q8NFN8 814 aa18.54■□□□□ 0.56
PRPF40B-206ENST00000547764 RMI1Q9H9A7 625 aa18.54■□□□□ 0.56
PRPF40B-206ENST00000547764 RAB6BQ9NRW1 208 aa18.54■□□□□ 0.56
PRPF40B-206ENST00000547764 PIH1D1Q9NWS0 290 aaKnown RBP18.54■□□□□ 0.56
PRPF40B-206ENST00000547764 PAK5Q9P286 719 aa18.54■□□□□ 0.56
PRPF40B-206ENST00000547764 TTC7AQ9ULT0 858 aaPredicted RBP18.54■□□□□ 0.56
PRPF40B-206ENST00000547764 PLXNB3Q9ULL4 1909 aa18.54■□□□□ 0.56
PRPF40B-206ENST00000547764 ARHGEF17Q96PE2 2063 aaPredicted RBP18.54■□□□□ 0.56
PRPF40B-206ENST00000547764 CHD8Q9HCK8 2581 aa18.53■□□□□ 0.56
PRPF40B-206ENST00000547764 ERI2A8K979 691 aaKnown RBP18.53■□□□□ 0.56
PRPF40B-206ENST00000547764 GPR39O43194 453 aa18.53■□□□□ 0.56
PRPF40B-206ENST00000547764 OPA1O60313 960 aa18.53■□□□□ 0.56
PRPF40B-206ENST00000547764 UGT1A9O60656 530 aa18.53■□□□□ 0.56
PRPF40B-206ENST00000547764 MTX2O75431 263 aa18.53■□□□□ 0.56
PRPF40B-206ENST00000547764 UGT1A6P19224 532 aa18.53■□□□□ 0.56
PRPF40B-206ENST00000547764 UGT1A1P22309 533 aa18.53■□□□□ 0.56
PRPF40B-206ENST00000547764 UGT1A4P22310 534 aa18.53■□□□□ 0.56
PRPF40B-206ENST00000547764 UGT1A3P35503 534 aa18.53■□□□□ 0.56
PRPF40B-206ENST00000547764 UGT1A5P35504 534 aa18.53■□□□□ 0.56
PRPF40B-206ENST00000547764 ACTR1BP42025 376 aa18.53■□□□□ 0.56
PRPF40B-206ENST00000547764 ACTR1AP61163 376 aa18.53■□□□□ 0.56
PRPF40B-206ENST00000547764 CCDC173Q0VFZ6 552 aa18.53■□□□□ 0.56
PRPF40B-206ENST00000547764 KHDC1Q4VXA5 237 aaKnown RBP18.53■□□□□ 0.56
PRPF40B-206ENST00000547764 GSTA5Q7RTV2 222 aa18.53■□□□□ 0.56
PRPF40B-206ENST00000547764 LINC00523Q86TU6 105 aa18.53■□□□□ 0.56
PRPF40B-206ENST00000547764 MAPK15Q8TD08 544 aa18.53■□□□□ 0.56
PRPF40B-206ENST00000547764 COG1Q8WTW3 980 aa18.53■□□□□ 0.56
PRPF40B-206ENST00000547764 NAT6Q93015 286 aa18.53■□□□□ 0.56
PRPF40B-206ENST00000547764 CNTNAP3BQ96NU0 1288 aa18.53■□□□□ 0.56
PRPF40B-206ENST00000547764 OSBPL9Q96SU4 736 aa18.53■□□□□ 0.56
PRPF40B-206ENST00000547764 CNTNAP3Q9BZ76 1288 aa18.53■□□□□ 0.56
PRPF40B-206ENST00000547764 UGT1A7Q9HAW7 530 aa18.53■□□□□ 0.56
PRPF40B-206ENST00000547764 UGT1A10Q9HAW8 530 aa18.53■□□□□ 0.56
PRPF40B-206ENST00000547764 UGT1A8Q9HAW9 530 aa18.53■□□□□ 0.56
PRPF40B-206ENST00000547764 RP1P56715 2156 aa18.52■□□□□ 0.56
PRPF40B-206ENST00000547764 E7EVH7 732 aa18.52■□□□□ 0.56
PRPF40B-206ENST00000547764 GRID2O43424 1007 aa18.52■□□□□ 0.56
PRPF40B-206ENST00000547764 LDB2O43679 373 aa18.52■□□□□ 0.56
PRPF40B-206ENST00000547764 SUN1O94901 812 aa18.52■□□□□ 0.56
PRPF40B-206ENST00000547764 JUPP14923 745 aa18.52■□□□□ 0.56
PRPF40B-206ENST00000547764 CA5AP35218 305 aa18.52■□□□□ 0.56
PRPF40B-206ENST00000547764 LMAN1P49257 510 aa18.52■□□□□ 0.56
PRPF40B-206ENST00000547764 ZNF140P52738 457 aaPredicted RBP18.52■□□□□ 0.56
PRPF40B-206ENST00000547764 PDE1BQ01064 536 aa18.52■□□□□ 0.56
PRPF40B-206ENST00000547764 SEMA5AQ13591 1074 aa18.52■□□□□ 0.56
PRPF40B-206ENST00000547764 LRP8Q14114 963 aa18.52■□□□□ 0.56
PRPF40B-206ENST00000547764 C14orf28Q4W4Y0 310 aa18.52■□□□□ 0.56
PRPF40B-206ENST00000547764 CHST15Q7LFX5 561 aaPredicted RBP18.52■□□□□ 0.56
PRPF40B-206ENST00000547764 OR52K1Q8NGK4 314 aa18.52■□□□□ 0.56
PRPF40B-206ENST00000547764 OR13C4Q8NGS5 318 aa18.52■□□□□ 0.56
PRPF40B-206ENST00000547764 GDAP1Q8TB36 358 aa18.52■□□□□ 0.56
PRPF40B-206ENST00000547764 ZDHHC1Q8WTX9 485 aa18.52■□□□□ 0.56
PRPF40B-206ENST00000547764 GATA6Q92908 595 aa18.52■□□□□ 0.56
PRPF40B-206ENST00000547764 TMEM121BQ9BXQ6 578 aaPredicted RBP18.52■□□□□ 0.56
PRPF40B-206ENST00000547764 AP1M1Q9BXS5 423 aa18.52■□□□□ 0.56
PRPF40B-206ENST00000547764 ABCG4Q9H172 646 aa18.52■□□□□ 0.56
PRPF40B-206ENST00000547764 SMARCAL1Q9NZC9 954 aa18.52■□□□□ 0.56
PRPF40B-206ENST00000547764 FKBPLQ9UIM3 349 aa18.52■□□□□ 0.56
PRPF40B-206ENST00000547764 SNX12Q9UMY4 172 aa18.52■□□□□ 0.56
PRPF40B-206ENST00000547764 ACACBO00763 2458 aa18.51■□□□□ 0.55
PRPF40B-206ENST00000547764 AKAP13Q12802 2813 aa18.51■□□□□ 0.55
PRPF40B-206ENST00000547764 C1QTNF9BB2RNN3 333 aa18.51■□□□□ 0.55
PRPF40B-206ENST00000547764 GPR89AB7ZAQ6 455 aa18.51■□□□□ 0.55
PRPF40B-206ENST00000547764 CHUKO15111 745 aa18.51■□□□□ 0.55
PRPF40B-206ENST00000547764 VEGFDO43915 354 aa18.51■□□□□ 0.55
PRPF40B-206ENST00000547764 CDK14O94921 469 aa18.51■□□□□ 0.55
PRPF40B-206ENST00000547764 PRAMEF1O95521 474 aa18.51■□□□□ 0.55
PRPF40B-206ENST00000547764 C1QTNF9P0C862 333 aa18.51■□□□□ 0.55
PRPF40B-206ENST00000547764 GPR89BP0CG08 455 aa18.51■□□□□ 0.55
PRPF40B-206ENST00000547764 ACP5P13686 325 aa18.51■□□□□ 0.55
PRPF40B-206ENST00000547764 TMPRSS15P98073 1019 aa18.51■□□□□ 0.55
PRPF40B-206ENST00000547764 ITGA9Q13797 1035 aa18.51■□□□□ 0.55
PRPF40B-206ENST00000547764 HLTFQ14527 1009 aaKnown RBP eCLIP18.51■□□□□ 0.55
PRPF40B-206ENST00000547764 POU6F1Q14863 301 aa18.51■□□□□ 0.55
PRPF40B-206ENST00000547764 KCTD19Q17RG1 926 aaPredicted RBP18.51■□□□□ 0.55
PRPF40B-206ENST00000547764 ZNF398Q8TD17 642 aa18.51■□□□□ 0.55
PRPF40B-206ENST00000547764 ACTRT1Q8TDG2 376 aa18.51■□□□□ 0.55
PRPF40B-206ENST00000547764 CCDC74AQ96AQ1 378 aa18.51■□□□□ 0.55
PRPF40B-206ENST00000547764 NAP1L3Q99457 506 aaPredicted RBP18.51■□□□□ 0.55
PRPF40B-206ENST00000547764 C19orf43Q9BQ61 176 aa18.51■□□□□ 0.55
PRPF40B-206ENST00000547764 CCDC3Q9BQI4 270 aa18.51■□□□□ 0.55
PRPF40B-206ENST00000547764 RABGEF1Q9UJ41 708 aa18.51■□□□□ 0.55
PRPF40B-206ENST00000547764 CLCA2Q9UQC9 943 aa18.51■□□□□ 0.55
PRPF40B-206ENST00000547764 PGRMC1O00264 195 aaKnown RBP18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 CASC3O15234 703 aaKnown RBP18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 ECEL1O95672 775 aa18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 MT-CO3P00414 261 aa18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 APRTP07741 180 aa18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 GLB1P16278 677 aa18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 GRIA1P42261 906 aa18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 GNG11P61952 73 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms