RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 DTWD2Q8NBA8 298 aa15.71■□□□□ 0.11
TRAFD1-203ENST00000547063 DDHD1Q8NEL9 900 aa15.71■□□□□ 0.11
TRAFD1-203ENST00000547063 GDAP1Q8TB36 358 aa15.71■□□□□ 0.11
TRAFD1-203ENST00000547063 PGM2Q96G03 612 aa15.71■□□□□ 0.11
TRAFD1-203ENST00000547063 DCUN1D1Q96GG9 259 aa15.71■□□□□ 0.11
TRAFD1-203ENST00000547063 GPR174Q9BXC1 333 aa15.71■□□□□ 0.11
TRAFD1-203ENST00000547063 FAM126AQ9BYI3 521 aaPredicted RBP15.71■□□□□ 0.11
TRAFD1-203ENST00000547063 CLPBQ9H078 707 aa15.71■□□□□ 0.11
TRAFD1-203ENST00000547063 FAM96AQ9H5X1 160 aa15.71■□□□□ 0.11
TRAFD1-203ENST00000547063 UGT1A7Q9HAW7 530 aa15.71■□□□□ 0.11
TRAFD1-203ENST00000547063 UGT1A10Q9HAW8 530 aa15.71■□□□□ 0.11
TRAFD1-203ENST00000547063 UGT1A8Q9HAW9 530 aa15.71■□□□□ 0.11
TRAFD1-203ENST00000547063 CD93Q9NPY3 652 aa15.71■□□□□ 0.11
TRAFD1-203ENST00000547063 FBXO4Q9UKT5 387 aa15.71■□□□□ 0.11
TRAFD1-203ENST00000547063 PCDHB1Q9Y5F3 818 aa15.71■□□□□ 0.11
TRAFD1-203ENST00000547063 BDP1A6H8Y1 2624 aa15.71■□□□□ 0.11
TRAFD1-203ENST00000547063 NUMA1Q14980 2115 aa15.71■□□□□ 0.11
TRAFD1-203ENST00000547063 UBA6A0AVT1 1052 aaPredicted RBP15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 C10orf142B7Z368 130 aa15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 H3BMM5 538 aa15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 PRMT5O14744 637 aaPredicted RBP15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 FPGTO14772 594 aa15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 SLC31A1O15431 190 aa15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 MAP3K13O43283 966 aa15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 HAUS5O94927 633 aa15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 SLC25A14O95258 325 aaPredicted RBP15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 HNRNPA2B1P22626 353 aaKnown RBP15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 RPS3P23396 243 aaKnown RBP eCLIP15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 GCAP28676 217 aa15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 MAT2AP31153 395 aaKnown RBP15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 NSG1P42857 185 aa15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 MPP1Q00013 466 aa15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 SEMA3AQ14563 771 aa15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 DBN1Q16643 649 aa15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 HSP90B2PQ58FF3 399 aa15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 LONP2Q86WA8 852 aa15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 TMEM105Q8N8V8 129 aa15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 TP53I13Q8NBR0 393 aaPredicted RBP15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 FAM174AQ8TBP5 190 aa15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 RLN3Q8WXF3 142 aa15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 LPGAT1Q92604 370 aa15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 FOXJ1Q92949 421 aa15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 CENPTQ96BT3 561 aa15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 HIC2Q96JB3 615 aa15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 VPS39Q96JC1 886 aa15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 CENPHQ9H3R5 247 aa15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 FBXO6Q9NRD1 293 aaPredicted RBP15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 PHPT1Q9NRX4 125 aaPredicted RBP15.7■□□□□ 0.1
TRAFD1-203ENST00000547063 IGLV3-16A0A075B6K0 115 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 FADS2P1A8MWK0 482 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 PRAMEF26H0Y7S4 382 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 TNFRSF10AO00220 468 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 FSBPO95073 299 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 ESR1P03372 595 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 PCCBP05166 539 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 ITGA2BP08514 1039 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 KRT15P19012 456 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 MSH3P20585 1137 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 AKT1P31749 480 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 TRIM23P36406 574 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 CDKN1CP49918 316 aaPredicted RBP15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 RPL6Q02878 288 aaKnown RBP15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 CSTF1Q05048 431 aaKnown RBP15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 FGL2Q14314 439 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 IRF4Q15306 451 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 TMED2Q15363 201 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 TMEM31Q5JXX7 168 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 GPRC6AQ5T6X5 926 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 LDB1Q86U70 411 aaPredicted RBP15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 KLK6Q92876 244 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 TSPAN17Q96FV3 270 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 GPR22Q99680 433 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 MCMBPQ9BTE3 642 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 TSSK1BQ9BXA7 367 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 C6orf106Q9H6K1 298 aaPredicted RBP15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 WDR26Q9H7D7 661 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 EURLQ9NYK6 297 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 SENP1Q9P0U3 644 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 SLC17A6Q9P2U8 582 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 TBK1Q9UHD2 729 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 GNPTGQ9UJJ9 305 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 HS3ST3A1Q9Y663 406 aa15.69■□□□□ 0.1
TRAFD1-203ENST00000547063 METTL12A8MUP2 240 aa15.68■□□□□ 0.1
TRAFD1-203ENST00000547063 GPR89AB7ZAQ6 455 aa15.68■□□□□ 0.1
TRAFD1-203ENST00000547063 AGPSO00116 658 aa15.68■□□□□ 0.1
TRAFD1-203ENST00000547063 VEGFDO43915 354 aa15.68■□□□□ 0.1
TRAFD1-203ENST00000547063 FAM155BO75949 473 aa15.68■□□□□ 0.1
TRAFD1-203ENST00000547063 AP2A2O94973 939 aa15.68■□□□□ 0.1
TRAFD1-203ENST00000547063 SOD1P00441 154 aa15.68■□□□□ 0.1
TRAFD1-203ENST00000547063 HOXC4P09017 264 aaPredicted RBP15.68■□□□□ 0.1
TRAFD1-203ENST00000547063 GPR89BP0CG08 455 aa15.68■□□□□ 0.1
TRAFD1-203ENST00000547063 PRSS56P0CW18 603 aa15.68■□□□□ 0.1
TRAFD1-203ENST00000547063 TDGF1P13385 188 aa15.68■□□□□ 0.1
TRAFD1-203ENST00000547063 GABRB3P28472 473 aa15.68■□□□□ 0.1
TRAFD1-203ENST00000547063 SLC12A2P55011 1212 aa15.68■□□□□ 0.1
TRAFD1-203ENST00000547063 POU4F1Q01851 419 aa15.68■□□□□ 0.1
TRAFD1-203ENST00000547063 INPP5AQ14642 412 aa15.68■□□□□ 0.1
TRAFD1-203ENST00000547063 MROH9Q5TGP6 573 aa15.68■□□□□ 0.1
TRAFD1-203ENST00000547063 AGBL2Q5U5Z8 902 aa15.68■□□□□ 0.1
TRAFD1-203ENST00000547063 FAM45BPQ6NSW5 357 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms