RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 WDR24Q96S15 920 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 NUDT22Q9BRQ3 303 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 CEP41Q9BYV8 373 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 EPB41L1Q9H4G0 881 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 TRABDQ9H4I3 376 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 SARS2Q9NP81 518 aaKnown RBP9.27□□□□□ -0.93
YBX3-218ENST00000546298 HACD3Q9P035 362 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 KLHL8Q9P2G9 620 aaPredicted RBP9.27□□□□□ -0.93
YBX3-218ENST00000546298 NFKBIL1Q9UBC1 381 aaPredicted RBP9.27□□□□□ -0.93
YBX3-218ENST00000546298 SHOC2Q9UQ13 582 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 ZNF711Q9Y462 761 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 HYOU1Q9Y4L1 999 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 ST14Q9Y5Y6 855 aa9.27□□□□□ -0.93
YBX3-218ENST00000546298 FRYQ5TBA9 3013 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 PTPRQQ9UMZ3 2332 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 PRAMEF33A0A0G2JMD5 474 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 HACD1B0YJ81 288 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 AGRPO00253 132 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 VEGFDO43915 354 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 SNX2O60749 519 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 PRAMEF10O60809 474 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 PMPCBO75439 489 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 LCA5LO95447 670 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 F3P13726 295 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 ITIH1P19827 911 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 ATP1A2P50993 1020 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 EPHA4P54764 986 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 CFHR1Q03591 330 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 PRKD1Q15139 912 aaPredicted RBP9.26□□□□□ -0.93
YBX3-218ENST00000546298 TAZQ16635 292 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 MANEAQ5SRI9 462 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.26□□□□□ -0.93
YBX3-218ENST00000546298 CCDC181Q5TID7 509 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 NKAIN2Q5VXU1 208 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 ALS2CLQ60I27 953 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 C11orf63Q6NUN7 778 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 XKR5Q6UX68 686 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 ZNF574Q6ZN55 896 aaPredicted RBP9.26□□□□□ -0.93
YBX3-218ENST00000546298 PID1Q7Z2X4 250 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 TMPRSS9Q7Z410 1059 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 CCDC50Q8IVM0 306 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 TC2NQ8N9U0 490 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 ZSCAN1Q8NBB4 408 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 GPR26Q8NDV2 337 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 DTX3LQ8TDB6 740 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 GLYATL1Q969I3 302 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 PLEKHG4BQ96PX9 1271 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 ASPSCR1Q9BZE9 553 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 OR2AG1Q9H205 316 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.26□□□□□ -0.93
YBX3-218ENST00000546298 ATXN10Q9UBB4 475 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 TBC1D29Q9UFV1 150 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 TRHDEQ9UKU6 1024 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 KCNK6Q9Y257 313 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 PRKAB1Q9Y478 270 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 PCDHGA3Q9Y5H0 932 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 PCDHA13Q9Y5I0 950 aa9.26□□□□□ -0.93
YBX3-218ENST00000546298 OAS3Q9Y6K5 1087 aaKnown RBP9.26□□□□□ -0.93
YBX3-218ENST00000546298 TP53BP1Q12888 1972 aaPredicted RBP9.26□□□□□ -0.93
YBX3-218ENST00000546298 RP1P56715 2156 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 hCG_1818297A0A087WSY0 165 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 LOC285095A0A1B0GVY8 99 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 B4E171 279 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.25□□□□□ -0.93
YBX3-218ENST00000546298 STMND1H3BQB6 276 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 CHUKO15111 745 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 KMOO15229 486 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 KCNJ13O60928 360 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 CDK14O94921 469 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 MT-CYBP00156 380 aaPredicted RBP9.25□□□□□ -0.93
YBX3-218ENST00000546298 SLC4A1P02730 911 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 PIRTP0C851 137 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 THRAP10827 490 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 CCL4P13236 92 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 PECAM1P16284 738 aaPredicted RBP9.25□□□□□ -0.93
YBX3-218ENST00000546298 ZNF8P17098 575 aaPredicted RBP9.25□□□□□ -0.93
YBX3-218ENST00000546298 VCLP18206 1134 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 HMGCLP35914 325 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 ETV5P41161 510 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 CETN2P41208 172 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 TSPAN7P41732 249 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 WNT3AP56704 352 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 COPS2P61201 443 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 XRCC4Q13426 336 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 GTF2H3Q13889 308 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 PPP2R5EQ16537 467 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 WDR74Q6RFH5 385 aaPredicted RBP9.25□□□□□ -0.93
YBX3-218ENST00000546298 BBS12Q6ZW61 710 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 ADGRG6Q86SQ4 1221 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 DAAM2Q86T65 1068 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 LRRTM4Q86VH4 590 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 ZC3H18Q86VM9 953 aaKnown RBP9.25□□□□□ -0.93
YBX3-218ENST00000546298 ZFAND4Q86XD8 727 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 TMTC1Q8IUR5 882 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 RCBTB1Q8NDN9 531 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 SPATA22Q8NHS9 363 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 BRSK1Q8TDC3 778 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 HTR3CQ8WXA8 447 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 TTC9Q92623 222 aa9.25□□□□□ -0.93
YBX3-218ENST00000546298 EID2BQ96D98 161 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms