RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 GALNT2Q10471 571 aa16.48■□□□□ 0.23
CPSF7-225ENST00000545934 TCTN3Q6NUS6 607 aa16.48■□□□□ 0.23
CPSF7-225ENST00000545934 PLXDC1Q8IUK5 500 aa16.48■□□□□ 0.23
CPSF7-225ENST00000545934 AVL9Q8NBF6 648 aa16.48■□□□□ 0.23
CPSF7-225ENST00000545934 ARRDC2Q8TBH0 407 aa16.48■□□□□ 0.23
CPSF7-225ENST00000545934 FATE1Q969F0 183 aa16.48■□□□□ 0.23
CPSF7-225ENST00000545934 C9orf72Q96LT7 481 aa16.48■□□□□ 0.23
CPSF7-225ENST00000545934 ISCUQ9H1K1 167 aa16.48■□□□□ 0.23
CPSF7-225ENST00000545934 MRPL47Q9HD33 250 aaKnown RBP16.48■□□□□ 0.23
CPSF7-225ENST00000545934 LMBRD1Q9NUN5 540 aa16.48■□□□□ 0.23
CPSF7-225ENST00000545934 AIPL1Q9NZN9 384 aa16.48■□□□□ 0.23
CPSF7-225ENST00000545934 KLHL3Q9UH77 587 aa16.48■□□□□ 0.23
CPSF7-225ENST00000545934 AMACRQ9UHK6 382 aa16.48■□□□□ 0.23
CPSF7-225ENST00000545934 CHKBQ9Y259 395 aa16.48■□□□□ 0.23
CPSF7-225ENST00000545934 ICE1Q9Y2F5 2266 aa16.47■□□□□ 0.23
CPSF7-225ENST00000545934 BLACEA4D250 179 aa16.47■□□□□ 0.23
CPSF7-225ENST00000545934 TOX3O15405 576 aaPredicted RBP16.47■□□□□ 0.23
CPSF7-225ENST00000545934 MTSS1O43312 755 aa16.47■□□□□ 0.23
CPSF7-225ENST00000545934 MYBL1P10243 752 aa16.47■□□□□ 0.23
CPSF7-225ENST00000545934 NR1D1P20393 614 aa16.47■□□□□ 0.23
CPSF7-225ENST00000545934 CES1P23141 567 aa16.47■□□□□ 0.23
CPSF7-225ENST00000545934 DLSTP36957 453 aa16.47■□□□□ 0.23
CPSF7-225ENST00000545934 GARSP41250 739 aaKnown RBP16.47■□□□□ 0.23
CPSF7-225ENST00000545934 MAPK9P45984 424 aa16.47■□□□□ 0.23
CPSF7-225ENST00000545934 PPM1FP49593 454 aaPredicted RBP16.47■□□□□ 0.23
CPSF7-225ENST00000545934 RPL26P61254 145 aaKnown RBP16.47■□□□□ 0.23
CPSF7-225ENST00000545934 NIPA2Q8N8Q9 360 aa16.47■□□□□ 0.23
CPSF7-225ENST00000545934 TRIM11Q96F44 468 aa16.47■□□□□ 0.23
CPSF7-225ENST00000545934 PLEKHG4BQ96PX9 1271 aa16.47■□□□□ 0.23
CPSF7-225ENST00000545934 CARD9Q9H257 536 aa16.47■□□□□ 0.23
CPSF7-225ENST00000545934 RCOR3Q9P2K3 495 aaPredicted RBP16.47■□□□□ 0.23
CPSF7-225ENST00000545934 CROTQ9UKG9 612 aa16.47■□□□□ 0.23
CPSF7-225ENST00000545934 RPL26L1Q9UNX3 145 aaKnown RBP16.47■□□□□ 0.23
CPSF7-225ENST00000545934 RGSL1A5PLK6 1076 aa16.46■□□□□ 0.23
CPSF7-225ENST00000545934 GRID2O43424 1007 aa16.46■□□□□ 0.23
CPSF7-225ENST00000545934 MFSD11O43934 449 aa16.46■□□□□ 0.23
CPSF7-225ENST00000545934 RECKO95980 971 aa16.46■□□□□ 0.23
CPSF7-225ENST00000545934 XRCC1P18887 633 aaPredicted RBP16.46■□□□□ 0.23
CPSF7-225ENST00000545934 CDK11BP21127 795 aaKnown RBP16.46■□□□□ 0.23
CPSF7-225ENST00000545934 EPHB1P54762 984 aa16.46■□□□□ 0.23
CPSF7-225ENST00000545934 NIPAL4Q0D2K0 466 aa16.46■□□□□ 0.23
CPSF7-225ENST00000545934 PAFAH1B3Q15102 231 aaKnown RBP16.46■□□□□ 0.23
CPSF7-225ENST00000545934 ASIC2Q16515 512 aa16.46■□□□□ 0.23
CPSF7-225ENST00000545934 C6orf15Q6UXA7 325 aaPredicted RBP16.46■□□□□ 0.23
CPSF7-225ENST00000545934 CLEC17AQ6ZS10 378 aa16.46■□□□□ 0.23
CPSF7-225ENST00000545934 AOPEPQ8N6M6 819 aa16.46■□□□□ 0.23
CPSF7-225ENST00000545934 ULBP3Q9BZM4 244 aa16.46■□□□□ 0.23
CPSF7-225ENST00000545934 FAM83DQ9H4H8 585 aa16.46■□□□□ 0.23
CPSF7-225ENST00000545934 ZNF768Q9H5H4 540 aaKnown RBP16.46■□□□□ 0.23
CPSF7-225ENST00000545934 PRDM8Q9NQV8 689 aa16.46■□□□□ 0.23
CPSF7-225ENST00000545934 SCHIP1Q9P0W5 487 aaPredicted RBP16.46■□□□□ 0.23
CPSF7-225ENST00000545934 ATXN10Q9UBB4 475 aa16.46■□□□□ 0.23
CPSF7-225ENST00000545934 MYO1AQ9UBC5 1043 aa16.46■□□□□ 0.23
CPSF7-225ENST00000545934 PCDHGA6Q9Y5G7 932 aa16.46■□□□□ 0.23
CPSF7-225ENST00000545934 MATN3O15232 486 aa16.45■□□□□ 0.22
CPSF7-225ENST00000545934 SNX2O60749 519 aa16.45■□□□□ 0.22
CPSF7-225ENST00000545934 CD48P09326 243 aa16.45■□□□□ 0.22
CPSF7-225ENST00000545934 FGF5P12034 268 aa16.45■□□□□ 0.22
CPSF7-225ENST00000545934 ZNF165P49910 485 aa16.45■□□□□ 0.22
CPSF7-225ENST00000545934 ARSEP51690 589 aa16.45■□□□□ 0.22
CPSF7-225ENST00000545934 MLLT10P55197 1068 aa16.45■□□□□ 0.22
CPSF7-225ENST00000545934 ITKQ08881 620 aa16.45■□□□□ 0.22
CPSF7-225ENST00000545934 PIGHQ14442 188 aaPredicted RBP16.45■□□□□ 0.22
CPSF7-225ENST00000545934 IL11RAQ14626 422 aa16.45■□□□□ 0.22
CPSF7-225ENST00000545934 NCBP2-AS2Q69YL0 99 aa16.45■□□□□ 0.22
CPSF7-225ENST00000545934 TMEM26Q6ZUK4 368 aa16.45■□□□□ 0.22
CPSF7-225ENST00000545934 ATCAYQ86WG3 371 aa16.45■□□□□ 0.22
CPSF7-225ENST00000545934 CCDC13Q8IYE1 715 aa16.45■□□□□ 0.22
CPSF7-225ENST00000545934 GALNT6Q8NCL4 622 aa16.45■□□□□ 0.22
CPSF7-225ENST00000545934 EID2BQ96D98 161 aa16.45■□□□□ 0.22
CPSF7-225ENST00000545934 TSGA13Q96PP4 275 aa16.45■□□□□ 0.22
CPSF7-225ENST00000545934 PCDH9Q9HC56 1237 aa16.45■□□□□ 0.22
CPSF7-225ENST00000545934 RTN4Q9NQC3 1192 aaKnown RBP16.45■□□□□ 0.22
CPSF7-225ENST00000545934 ANO10Q9NW15 660 aa16.45■□□□□ 0.22
CPSF7-225ENST00000545934 RBM22Q9NW64 420 aaKnown RBP eCLIP16.45■□□□□ 0.221e-6■■■■□ 23.9
CPSF7-225ENST00000545934 ZNF624Q9P2J8 865 aaPredicted RBP16.45■□□□□ 0.22
CPSF7-225ENST00000545934 POLHQ9Y253 713 aa16.45■□□□□ 0.22
CPSF7-225ENST00000545934 PCDHB3Q9Y5E6 796 aa16.45■□□□□ 0.22
CPSF7-225ENST00000545934 SLC30A1Q9Y6M5 507 aa16.45■□□□□ 0.22
CPSF7-225ENST00000545934 MED13Q9UHV7 2174 aa16.45■□□□□ 0.22
CPSF7-225ENST00000545934 C1orf232A0A0U1RR37 186 aa16.44■□□□□ 0.22
CPSF7-225ENST00000545934 MKRN2OSH3BPM6 223 aa16.44■□□□□ 0.22
CPSF7-225ENST00000545934 CHUKO15111 745 aa16.44■□□□□ 0.22
CPSF7-225ENST00000545934 ZNF8P17098 575 aaPredicted RBP16.44■□□□□ 0.22
CPSF7-225ENST00000545934 CCNCP24863 283 aa16.44■□□□□ 0.22
CPSF7-225ENST00000545934 PMS2P54278 862 aa16.44■□□□□ 0.22
CPSF7-225ENST00000545934 SH3BP2P78314 561 aa16.44■□□□□ 0.22
CPSF7-225ENST00000545934 FOXM1Q08050 763 aa16.44■□□□□ 0.22
CPSF7-225ENST00000545934 MMRN1Q13201 1228 aa16.44■□□□□ 0.22
CPSF7-225ENST00000545934 ERV3-1Q14264 604 aa16.44■□□□□ 0.22
CPSF7-225ENST00000545934 QPCTQ16769 361 aa16.44■□□□□ 0.22
CPSF7-225ENST00000545934 TIGD7Q6NT04 549 aaPredicted RBP16.44■□□□□ 0.22
CPSF7-225ENST00000545934 PHYKPLQ8IUZ5 450 aa16.44■□□□□ 0.22
CPSF7-225ENST00000545934 APLFQ8IW19 511 aaPredicted RBP16.44■□□□□ 0.22
CPSF7-225ENST00000545934 LPCAT1Q8NF37 534 aa16.44■□□□□ 0.22
CPSF7-225ENST00000545934 PKD2L2Q9NZM6 624 aa16.44■□□□□ 0.22
CPSF7-225ENST00000545934 ANKRD66B4E2M5 251 aa16.43■□□□□ 0.22
CPSF7-225ENST00000545934 GPR89AB7ZAQ6 455 aa16.43■□□□□ 0.22
CPSF7-225ENST00000545934 UBXN7O94888 489 aa16.43■□□□□ 0.22
CPSF7-225ENST00000545934 PDGFAP04085 211 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms