RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 LPOP22079 712 aaPredicted RBP15.56■□□□□ 0.08
CCDC78-216ENST00000544996 GDF10P55107 478 aa15.56■□□□□ 0.08
CCDC78-216ENST00000544996 CYP4F3Q08477 520 aa15.56■□□□□ 0.08
CCDC78-216ENST00000544996 ITGA9Q13797 1035 aa15.56■□□□□ 0.08
CCDC78-216ENST00000544996 SPARCL1Q14515 664 aa15.56■□□□□ 0.08
CCDC78-216ENST00000544996 TAF1AQ15573 450 aaPredicted RBP15.56■□□□□ 0.08
CCDC78-216ENST00000544996 ISXQ2M1V0 245 aa15.56■□□□□ 0.08
CCDC78-216ENST00000544996 ATP13A5Q4VNC0 1218 aa15.56■□□□□ 0.08
CCDC78-216ENST00000544996 PROSER1Q86XN7 944 aa15.56■□□□□ 0.08
CCDC78-216ENST00000544996 CCNJLQ8IV13 435 aa15.56■□□□□ 0.08
CCDC78-216ENST00000544996 ARL14Q8N4G2 192 aa15.56■□□□□ 0.08
CCDC78-216ENST00000544996 Q8N9G6 341 aaPredicted RBP15.56■□□□□ 0.08
CCDC78-216ENST00000544996 BRSK1Q8TDC3 778 aa15.56■□□□□ 0.08
CCDC78-216ENST00000544996 MAIP1Q8WWC4 291 aa15.56■□□□□ 0.08
CCDC78-216ENST00000544996 C1orf54Q8WWF1 131 aa15.56■□□□□ 0.08
CCDC78-216ENST00000544996 TTC25Q96NG3 672 aa15.56■□□□□ 0.08
CCDC78-216ENST00000544996 GFM1Q96RP9 751 aaKnown RBP15.56■□□□□ 0.08
CCDC78-216ENST00000544996 LRRC40Q9H9A6 602 aa15.56■□□□□ 0.08
CCDC78-216ENST00000544996 ST14Q9Y5Y6 855 aa15.56■□□□□ 0.08
CCDC78-216ENST00000544996 ARL5AQ9Y689 179 aa15.56■□□□□ 0.08
CCDC78-216ENST00000544996 RNF215Q9Y6U7 377 aa15.56■□□□□ 0.08
CCDC78-216ENST00000544996 PTPRBP23467 1997 aa15.56■□□□□ 0.08
CCDC78-216ENST00000544996 LRP4O75096 1905 aa15.55■□□□□ 0.08
CCDC78-216ENST00000544996 BUD23O43709 281 aaKnown RBP15.55■□□□□ 0.08
CCDC78-216ENST00000544996 CDK14O94921 469 aa15.55■□□□□ 0.08
CCDC78-216ENST00000544996 METTL18O95568 372 aa15.55■□□□□ 0.08
CCDC78-216ENST00000544996 ECEL1O95672 775 aa15.55■□□□□ 0.08
CCDC78-216ENST00000544996 IFNB1P01574 187 aa15.55■□□□□ 0.08
CCDC78-216ENST00000544996 RPLP0P05388 317 aaKnown RBP15.55■□□□□ 0.08
CCDC78-216ENST00000544996 ACP5P13686 325 aa15.55■□□□□ 0.08
CCDC78-216ENST00000544996 ZNF8P17098 575 aaPredicted RBP15.55■□□□□ 0.08
CCDC78-216ENST00000544996 MAZP56270 477 aaKnown RBP15.55■□□□□ 0.08
CCDC78-216ENST00000544996 CCL7P80098 99 aa15.55■□□□□ 0.08
CCDC78-216ENST00000544996 OLIG2Q13516 323 aa15.55■□□□□ 0.08
CCDC78-216ENST00000544996 GTF2H3Q13889 308 aa15.55■□□□□ 0.08
CCDC78-216ENST00000544996 RTP5Q14D33 572 aa15.55■□□□□ 0.08
CCDC78-216ENST00000544996 OASLQ15646 514 aaKnown RBP15.55■□□□□ 0.08
CCDC78-216ENST00000544996 CHRNA6Q15825 494 aa15.55■□□□□ 0.08
CCDC78-216ENST00000544996 ZNF648Q5T619 568 aaPredicted RBP15.55■□□□□ 0.08
CCDC78-216ENST00000544996 FAM151BQ6UXP7 276 aa15.55■□□□□ 0.08
CCDC78-216ENST00000544996 ADGRG6Q86SQ4 1221 aa15.55■□□□□ 0.08
CCDC78-216ENST00000544996 C17orf82Q86X59 251 aaPredicted RBP15.55■□□□□ 0.08
CCDC78-216ENST00000544996 SFTPA2Q8IWL1 248 aa15.55■□□□□ 0.08
CCDC78-216ENST00000544996 KLHDC8BQ8IXV7 354 aa15.55■□□□□ 0.08
CCDC78-216ENST00000544996 CCDC89Q8N998 374 aa15.55■□□□□ 0.08
CCDC78-216ENST00000544996 RTP4Q96DX8 246 aa15.55■□□□□ 0.08
CCDC78-216ENST00000544996 TLR10Q9BXR5 811 aa15.55■□□□□ 0.08
CCDC78-216ENST00000544996 ZCCHC2Q9C0B9 1178 aaKnown RBP15.55■□□□□ 0.08
CCDC78-216ENST00000544996 LRRN3Q9H3W5 708 aa15.55■□□□□ 0.08
CCDC78-216ENST00000544996 ARNT2Q9HBZ2 717 aa15.55■□□□□ 0.08
CCDC78-216ENST00000544996 RABGEF1Q9UJ41 708 aa15.55■□□□□ 0.08
CCDC78-216ENST00000544996 ZKSCAN5Q9Y2L8 839 aa15.55■□□□□ 0.08
CCDC78-216ENST00000544996 PCDHB1Q9Y5F3 818 aa15.55■□□□□ 0.08
CCDC78-216ENST00000544996 TMX2-CTNND1H3BSU7 103 aa15.54■□□□□ 0.08
CCDC78-216ENST00000544996 NTN3O00634 580 aaPredicted RBP15.54■□□□□ 0.08
CCDC78-216ENST00000544996 KMOO15229 486 aa15.54■□□□□ 0.08
CCDC78-216ENST00000544996 ZSCAN12O43309 604 aa15.54■□□□□ 0.08
CCDC78-216ENST00000544996 SLC2A4P14672 509 aa15.54■□□□□ 0.08
CCDC78-216ENST00000544996 SNX1Q13596 522 aa15.54■□□□□ 0.08
CCDC78-216ENST00000544996 CCNG2Q16589 344 aa15.54■□□□□ 0.08
CCDC78-216ENST00000544996 LDLRAP1Q5SW96 308 aa15.54■□□□□ 0.08
CCDC78-216ENST00000544996 KCTD11Q693B1 232 aa15.54■□□□□ 0.08
CCDC78-216ENST00000544996 SPRED1Q7Z699 444 aa15.54■□□□□ 0.08
CCDC78-216ENST00000544996 LINC00523Q86TU6 105 aa15.54■□□□□ 0.08
CCDC78-216ENST00000544996 NAGSQ8N159 534 aa15.54■□□□□ 0.08
CCDC78-216ENST00000544996 OR4K2Q8NGD2 314 aa15.54■□□□□ 0.08
CCDC78-216ENST00000544996 ERI2A8K979 691 aaKnown RBP15.53■□□□□ 0.08
CCDC78-216ENST00000544996 D6RAR5 112 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 E7EVH7 732 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 CHUKO15111 745 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 CEP104O60308 925 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 UGT1A9O60656 530 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 MTX2O75431 263 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 PRAMEF1O95521 474 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 AP2A1O95782 977 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 FGGP02679 453 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 UGT1A6P19224 532 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 UGT1A1P22309 533 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 UGT1A4P22310 534 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 ALDH4A1P30038 563 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 UGT1A3P35503 534 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 UGT1A5P35504 534 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 HADHAP40939 763 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 GPR3P46089 330 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 LMAN1P49257 510 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 TMEM115Q12893 351 aaPredicted RBP15.53■□□□□ 0.08
CCDC78-216ENST00000544996 PTPRCAPQ14761 206 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 INSCQ1MX18 579 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 DENND5AQ6IQ26 1287 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 CRTC3Q6UUV7 619 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 LRRTM4Q86VH4 590 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 LSMEM2Q8N112 164 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 TAB3Q8N5C8 712 aaPredicted RBP15.53■□□□□ 0.08
CCDC78-216ENST00000544996 ZNF398Q8TD17 642 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 PATE1Q8WXA2 126 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 ATXN7L3BQ96GX2 97 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 C19orf43Q9BQ61 176 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 STN1Q9H668 368 aaKnown RBP15.53■□□□□ 0.08
CCDC78-216ENST00000544996 UGT1A7Q9HAW7 530 aa15.53■□□□□ 0.08
CCDC78-216ENST00000544996 UGT1A10Q9HAW8 530 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms