RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 PAQR3Q6TCH7 311 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 RNF19BQ6ZMZ0 732 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 METTL3Q86U44 580 aaKnown RBP12.37□□□□□ -0.43
PAAF1-215ENST00000544909 LDB1Q86U70 411 aaPredicted RBP12.37□□□□□ -0.43
PAAF1-215ENST00000544909 RETREG3Q86VR2 466 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 NPAS4Q8IUM7 802 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 SLC15A3Q8IY34 581 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 AADATQ8N5Z0 425 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 DPP10Q8N608 796 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 LEMD2Q8NC56 503 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 PAPD5Q8NDF8 572 aaKnown RBP12.37□□□□□ -0.43
PAAF1-215ENST00000544909 TNIP2Q8NFZ5 429 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 OR4K2Q8NGD2 314 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 SLCO4A1Q96BD0 722 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 LRRC58Q96CX6 371 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 RMDN1Q96DB5 314 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 C9orf16Q9BUW7 83 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 ARHGAP39Q9C0H5 1083 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 PIDD1Q9HB75 910 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 AGPAT4Q9NRZ5 378 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 MAP10Q9P2G4 905 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 MTRRQ9UBK8 725 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 LEF1Q9UJU2 399 aaPredicted RBP12.37□□□□□ -0.43
PAAF1-215ENST00000544909 PACSIN3Q9UKS6 424 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 A0A0D9SEW6 157 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 UBA6A0AVT1 1052 aaPredicted RBP12.37□□□□□ -0.43
PAAF1-215ENST00000544909 CARNS1A5YM72 827 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 ZNF840PA6NDX5 716 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 NR5A2O00482 541 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 NME4O00746 187 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 CRCPO75575 148 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 PARNO95453 639 aaKnown RBP12.37□□□□□ -0.43
PAAF1-215ENST00000544909 H6PDO95479 791 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 EFEMP2O95967 443 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 GNRH1P01148 92 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 F11P03951 625 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 RHOCP08134 193 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 ZNF23P17027 643 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 ATF6P18850 670 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 TCN1P20061 433 aaPredicted RBP12.37□□□□□ -0.43
PAAF1-215ENST00000544909 MSH3P20585 1137 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 CAPN3P20807 821 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 SLC6A4P31645 630 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 MAPK8P45983 427 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 CDH13P55290 713 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 AP1S1P61966 158 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 PCBP2Q15366 365 aaKnown RBP eCLIP12.37□□□□□ -0.43
PAAF1-215ENST00000544909 KCTD21Q4G0X4 260 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 TMEM259Q4ZIN3 620 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 MTX3Q5HYI7 312 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 TPGS2Q68CL5 300 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 TTC23LQ6PF05 361 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 CIR1Q86X95 450 aaPredicted RBP12.37□□□□□ -0.43
PAAF1-215ENST00000544909 DDIASQ8IXT1 998 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 CRIPAKQ8N1N5 446 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 LRRC43Q8N309 656 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 OR9I1Q8NGQ6 314 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 CFHR5Q9BXR6 569 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 TUBB1Q9H4B7 451 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 HEBP1Q9NRV9 189 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 CNOT6Q9ULM6 557 aaKnown RBP12.37□□□□□ -0.43
PAAF1-215ENST00000544909 AP3M1Q9Y2T2 418 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 ZNF711Q9Y462 761 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 PCDHA9Q9Y5H5 950 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 SNX13Q9Y5W8 968 aa12.37□□□□□ -0.43
PAAF1-215ENST00000544909 ZFP37Q9Y6Q3 630 aaPredicted RBP12.37□□□□□ -0.43
PAAF1-215ENST00000544909 ATP6AP2A0A1C7CYW4 349 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 FAM234BA2RU67 622 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 TRIM64CA6NLI5 447 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 ZNF701M0R085 212 aaPredicted RBP12.36□□□□□ -0.43
PAAF1-215ENST00000544909 ENPP3O14638 875 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 SNX2O60749 519 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 ATP6AP2O75787 350 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 SIX3O95343 332 aaPredicted RBP12.36□□□□□ -0.43
PAAF1-215ENST00000544909 ENO2P09104 434 aaPredicted RBP12.36□□□□□ -0.43
PAAF1-215ENST00000544909 FASP25445 335 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 SLC11A1P49279 550 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 KCNQ1P51787 676 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 CACNG1Q06432 222 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 RALGDSQ12967 914 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 DUSP4Q13115 394 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 TSNQ15631 228 aaKnown RBP12.36□□□□□ -0.43
PAAF1-215ENST00000544909 PTPRNQ16849 979 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 NHSL2Q5HYW2 709 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 B3GNT6Q6ZMB0 384 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 ZBTB49Q6ZSB9 765 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 TBC1D21Q8IYX1 336 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 GRIN3AQ8TCU5 1115 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 CD200R1Q8TD46 325 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 LRTOMTQ8WZ04 291 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 SEPT8Q92599 483 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 CENPNQ96H22 339 aaPredicted RBP12.36□□□□□ -0.43
PAAF1-215ENST00000544909 CNBD2Q96M20 576 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 GPR21Q99679 349 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 NACA2Q9H009 215 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 PCDHAC1Q9H158 963 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 CRISPLD1Q9H336 500 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 MAGEE1Q9HCI5 957 aa12.36□□□□□ -0.43
PAAF1-215ENST00000544909 FBRSL1Q9HCM7 1045 aaKnown RBP12.36□□□□□ -0.43
PAAF1-215ENST00000544909 SUN2Q9UH99 717 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms