RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 MAP4K5Q9Y4K4 846 aa12.69□□□□□ -0.38
USP28-212ENST00000544750 CSMD1Q96PZ7 3565 aa12.69□□□□□ -0.38
USP28-212ENST00000544750 KIR2DS5A0A0G2JLQ3 304 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 A0A0G2JNG1 304 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 A0A0J9YYE9 177 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 CDC14CA4D256 554 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 KIR2DS3K7RE56 304 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 TOX3O15405 576 aaPredicted RBP12.68□□□□□ -0.38
USP28-212ENST00000544750 DAPK3O43293 454 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 KIAA0754O94854 1291 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 TRBC1P01850 177 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 FGF5P12034 268 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 ZNF30P17039 623 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 PBX1P40424 430 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 PPM1FP49593 454 aaPredicted RBP12.68□□□□□ -0.38
USP28-212ENST00000544750 ZNF135P52742 658 aaPredicted RBP12.68□□□□□ -0.38
USP28-212ENST00000544750 STC1P52823 247 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 SH3BP2P78314 561 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 FANCCQ00597 558 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 FOXM1Q08050 763 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 MAMLD1Q13495 774 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 KIR2DS5Q14953 304 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 NR1I3Q14994 352 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 E4F1Q66K89 784 aaPredicted RBP12.68□□□□□ -0.38
USP28-212ENST00000544750 CHST15Q7LFX5 561 aaPredicted RBP12.68□□□□□ -0.38
USP28-212ENST00000544750 LYSMD3Q7Z3D4 306 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 PSTKQ8IV42 348 aaKnown RBP12.68□□□□□ -0.38
USP28-212ENST00000544750 RAVER1Q8IY67 606 aaKnown RBP12.68□□□□□ -0.38
USP28-212ENST00000544750 EFCAB3Q8N7B9 438 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 AGPAT1Q99943 283 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 RIOK2Q9BVS4 552 aaKnown RBP12.68□□□□□ -0.38
USP28-212ENST00000544750 ZNF768Q9H5H4 540 aaKnown RBP12.68□□□□□ -0.38
USP28-212ENST00000544750 STN1Q9H668 368 aaKnown RBP12.68□□□□□ -0.38
USP28-212ENST00000544750 UCK1Q9HA47 277 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 ETNK2Q9NVF9 386 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 CPNE7Q9UBL6 633 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 CNOT8Q9UFF9 292 aaKnown RBP12.68□□□□□ -0.38
USP28-212ENST00000544750 ZNHIT2Q9UHR6 403 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 KCND3Q9UK17 655 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 KCNK6Q9Y257 313 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 SEC16AO15027 2179 aa12.68□□□□□ -0.38
USP28-212ENST00000544750 WIPF3A6NGB9 483 aa12.67□□□□□ -0.38
USP28-212ENST00000544750 OR5K4A6NMS3 321 aa12.67□□□□□ -0.38
USP28-212ENST00000544750 INPP4BO15327 924 aa12.67□□□□□ -0.38
USP28-212ENST00000544750 NDUFA10O95299 355 aa12.67□□□□□ -0.38
USP28-212ENST00000544750 ASMTLO95671 621 aa12.67□□□□□ -0.38
USP28-212ENST00000544750 ATP1A1P05023 1023 aaKnown RBP12.67□□□□□ -0.38
USP28-212ENST00000544750 PSMA2P25787 234 aa12.67□□□□□ -0.38
USP28-212ENST00000544750 MIPP30301 263 aa12.67□□□□□ -0.38
USP28-212ENST00000544750 MAPK9P45984 424 aa12.67□□□□□ -0.38
USP28-212ENST00000544750 CLCNKAP51800 687 aa12.67□□□□□ -0.38
USP28-212ENST00000544750 DNASE1L3Q13609 305 aa12.67□□□□□ -0.38
USP28-212ENST00000544750 LAMB3Q13751 1172 aa12.67□□□□□ -0.38
USP28-212ENST00000544750 IL11RAQ14626 422 aa12.67□□□□□ -0.38
USP28-212ENST00000544750 NADK2Q4G0N4 442 aa12.67□□□□□ -0.38
USP28-212ENST00000544750 PPP6R3Q5H9R7 873 aaPredicted RBP12.67□□□□□ -0.38
USP28-212ENST00000544750 PAPD7Q5XG87 772 aaKnown RBP12.67□□□□□ -0.38
USP28-212ENST00000544750 PLEKHA7Q6IQ23 1121 aa12.67□□□□□ -0.38
USP28-212ENST00000544750 ACAD10Q6JQN1 1059 aa12.67□□□□□ -0.38
USP28-212ENST00000544750 PLEKHG4BQ96PX9 1271 aa12.67□□□□□ -0.38
USP28-212ENST00000544750 OR6C1Q96RD1 312 aa12.67□□□□□ -0.38
USP28-212ENST00000544750 SYT11Q9BT88 431 aa12.67□□□□□ -0.38
USP28-212ENST00000544750 TWSG1Q9GZX9 223 aa12.67□□□□□ -0.38
USP28-212ENST00000544750 RMI1Q9H9A7 625 aa12.67□□□□□ -0.38
USP28-212ENST00000544750 LHX9Q9NQ69 397 aa12.67□□□□□ -0.38
USP28-212ENST00000544750 TAS2R14Q9NYV8 317 aa12.67□□□□□ -0.38
USP28-212ENST00000544750 SCHIP1Q9P0W5 487 aaPredicted RBP12.67□□□□□ -0.38
USP28-212ENST00000544750 PCDHGA9Q9Y5G4 932 aaKnown RBP12.67□□□□□ -0.38
USP28-212ENST00000544750 ADGRG1Q9Y653 693 aa12.67□□□□□ -0.38
USP28-212ENST00000544750 SLC30A1Q9Y6M5 507 aa12.67□□□□□ -0.38
USP28-212ENST00000544750 A1L4Q6 167 aa12.66□□□□□ -0.38
USP28-212ENST00000544750 TMEM191CA6NGB0 347 aa12.66□□□□□ -0.38
USP28-212ENST00000544750 FADS2P1A8MWK0 482 aa12.66□□□□□ -0.38
USP28-212ENST00000544750 NUAK1O60285 661 aa12.66□□□□□ -0.38
USP28-212ENST00000544750 KATNA1O75449 491 aa12.66□□□□□ -0.38
USP28-212ENST00000544750 SPAG6O75602 509 aa12.66□□□□□ -0.38
USP28-212ENST00000544750 DDAH2O95865 285 aa12.66□□□□□ -0.38
USP28-212ENST00000544750 SERPINC1P01008 464 aa12.66□□□□□ -0.38
USP28-212ENST00000544750 PRLP01236 227 aa12.66□□□□□ -0.38
USP28-212ENST00000544750 ACP5P13686 325 aa12.66□□□□□ -0.38
USP28-212ENST00000544750 SLC2A4P14672 509 aa12.66□□□□□ -0.38
USP28-212ENST00000544750 XRCC1P18887 633 aaPredicted RBP12.66□□□□□ -0.38
USP28-212ENST00000544750 COL8A1P27658 744 aa12.66□□□□□ -0.38
USP28-212ENST00000544750 GARSP41250 739 aaKnown RBP12.66□□□□□ -0.38
USP28-212ENST00000544750 MMP13P45452 471 aa12.66□□□□□ -0.38
USP28-212ENST00000544750 NOP2P46087 812 aaKnown RBP12.66□□□□□ -0.38
USP28-212ENST00000544750 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.66□□□□□ -0.38
USP28-212ENST00000544750 FILIP1LQ4L180 1135 aa12.66□□□□□ -0.38
USP28-212ENST00000544750 HENMT1Q5T8I9 393 aaKnown RBP12.66□□□□□ -0.38
USP28-212ENST00000544750 ZNF787Q6DD87 383 aa12.66□□□□□ -0.38
USP28-212ENST00000544750 ALG1LQ6GMV1 187 aa12.66□□□□□ -0.38
USP28-212ENST00000544750 TMEM26Q6ZUK4 368 aa12.66□□□□□ -0.38
USP28-212ENST00000544750 IRF2BP2Q7Z5L9 587 aa12.66□□□□□ -0.38
USP28-212ENST00000544750 TICAM1Q8IUC6 712 aa12.66□□□□□ -0.38
USP28-212ENST00000544750 TEX26Q8N6G2 289 aa12.66□□□□□ -0.38
USP28-212ENST00000544750 AVL9Q8NBF6 648 aa12.66□□□□□ -0.38
USP28-212ENST00000544750 CT55Q8WUE5 264 aa12.66□□□□□ -0.38
USP28-212ENST00000544750 KLHL6Q8WZ60 621 aa12.66□□□□□ -0.38
USP28-212ENST00000544750 STAMBPL1Q96FJ0 436 aa12.66□□□□□ -0.38
USP28-212ENST00000544750 TRIM7Q9C029 511 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms