RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 MLPHQ9BV36 600 aaPredicted RBP16.09■□□□□ 0.17
DDX55-212ENST00000544738 SEMA6CQ9H3T2 930 aa16.09■□□□□ 0.17
DDX55-212ENST00000544738 AKAP7Q9P0M2 348 aaPredicted RBP16.09■□□□□ 0.17
DDX55-212ENST00000544738 LRBAP50851 2863 aa16.09■□□□□ 0.17
DDX55-212ENST00000544738 C1orf232A0A0U1RR37 186 aa16.08■□□□□ 0.16
DDX55-212ENST00000544738 RGSL1A5PLK6 1076 aa16.08■□□□□ 0.16
DDX55-212ENST00000544738 C3orf70A6NLC5 250 aaPredicted RBP16.08■□□□□ 0.16
DDX55-212ENST00000544738 PPP1R12AO14974 1030 aaPredicted RBP16.08■□□□□ 0.16
DDX55-212ENST00000544738 AGFG2O95081 481 aa16.08■□□□□ 0.16
DDX55-212ENST00000544738 KRT1P04264 644 aa16.08■□□□□ 0.16
DDX55-212ENST00000544738 LIFP15018 202 aa16.08■□□□□ 0.16
DDX55-212ENST00000544738 AK4P27144 223 aaPredicted RBP16.08■□□□□ 0.16
DDX55-212ENST00000544738 CD86P42081 329 aa16.08■□□□□ 0.16
DDX55-212ENST00000544738 GPR3P46089 330 aa16.08■□□□□ 0.16
DDX55-212ENST00000544738 POLD2P49005 469 aa16.08■□□□□ 0.16
DDX55-212ENST00000544738 AP1B1Q10567 949 aa16.08■□□□□ 0.16
DDX55-212ENST00000544738 SLC30A9Q6PML9 568 aa16.08■□□□□ 0.16
DDX55-212ENST00000544738 RFLNAQ6ZTI6 216 aa16.08■□□□□ 0.16
DDX55-212ENST00000544738 BZW1Q7L1Q6 419 aaKnown RBP16.08■□□□□ 0.16
DDX55-212ENST00000544738 TMPRSS9Q7Z410 1059 aa16.08■□□□□ 0.16
DDX55-212ENST00000544738 ZNF438Q7Z4V0 828 aa16.08■□□□□ 0.16
DDX55-212ENST00000544738 PIM3Q86V86 326 aa16.08■□□□□ 0.16
DDX55-212ENST00000544738 SFTPA2Q8IWL1 248 aa16.08■□□□□ 0.16
DDX55-212ENST00000544738 CNTD1Q8N815 330 aa16.08■□□□□ 0.16
DDX55-212ENST00000544738 RNF214Q8ND24 703 aa16.08■□□□□ 0.16
DDX55-212ENST00000544738 LRRN4Q8WUT4 740 aa16.08■□□□□ 0.16
DDX55-212ENST00000544738 SMIM14Q96QK8 99 aa16.08■□□□□ 0.16
DDX55-212ENST00000544738 OR2M4Q96R27 311 aa16.08■□□□□ 0.16
DDX55-212ENST00000544738 RIOK2Q9BVS4 552 aaKnown RBP16.08■□□□□ 0.16
DDX55-212ENST00000544738 PKD2L2Q9NZM6 624 aa16.08■□□□□ 0.16
DDX55-212ENST00000544738 VPS18Q9P253 973 aa16.08■□□□□ 0.16
DDX55-212ENST00000544738 TMEM98Q9Y2Y6 226 aa16.08■□□□□ 0.16
DDX55-212ENST00000544738 CELSR2Q9HCU4 2923 aa16.08■□□□□ 0.16
DDX55-212ENST00000544738 SCN8AQ9UQD0 1980 aa16.07■□□□□ 0.16
DDX55-212ENST00000544738 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.07■□□□□ 0.16
DDX55-212ENST00000544738 ECEL1O95672 775 aa16.07■□□□□ 0.16
DDX55-212ENST00000544738 CPNE6O95741 557 aa16.07■□□□□ 0.16
DDX55-212ENST00000544738 MMP2P08253 660 aa16.07■□□□□ 0.16
DDX55-212ENST00000544738 ALDH4A1P30038 563 aa16.07■□□□□ 0.16
DDX55-212ENST00000544738 ACTR1BP42025 376 aa16.07■□□□□ 0.16
DDX55-212ENST00000544738 ACTR1AP61163 376 aa16.07■□□□□ 0.16
DDX55-212ENST00000544738 B4GALNT1Q00973 533 aa16.07■□□□□ 0.16
DDX55-212ENST00000544738 NR1D2Q14995 579 aa16.07■□□□□ 0.16
DDX55-212ENST00000544738 C16orf72Q14CZ0 275 aa16.07■□□□□ 0.16
DDX55-212ENST00000544738 QPCTQ16769 361 aa16.07■□□□□ 0.16
DDX55-212ENST00000544738 PYCR3Q53H96 274 aa16.07■□□□□ 0.16
DDX55-212ENST00000544738 RFX6Q8HWS3 928 aa16.07■□□□□ 0.16
DDX55-212ENST00000544738 GALNT13Q8IUC8 556 aa16.07■□□□□ 0.16
DDX55-212ENST00000544738 PTCD2Q8WV60 388 aaKnown RBP16.07■□□□□ 0.16
DDX55-212ENST00000544738 RNF25Q96BH1 459 aaPredicted RBP16.07■□□□□ 0.16
DDX55-212ENST00000544738 ABHD17AQ96GS6 310 aa16.07■□□□□ 0.16
DDX55-212ENST00000544738 COX14Q96I36 57 aa16.07■□□□□ 0.16
DDX55-212ENST00000544738 CATSPER2Q96P56 530 aa16.07■□□□□ 0.16
DDX55-212ENST00000544738 FAM83DQ9H4H8 585 aa16.07■□□□□ 0.16
DDX55-212ENST00000544738 ARHGEF17Q96PE2 2063 aaPredicted RBP16.07■□□□□ 0.16
DDX55-212ENST00000544738 CRYBG3Q68DQ2 2970 aa16.07■□□□□ 0.16
DDX55-212ENST00000544738 INPP4BO15327 924 aa16.06■□□□□ 0.16
DDX55-212ENST00000544738 NKX2-8O15522 239 aa16.06■□□□□ 0.16
DDX55-212ENST00000544738 B4GAT1O43505 415 aa16.06■□□□□ 0.16
DDX55-212ENST00000544738 SPOPO43791 374 aa16.06■□□□□ 0.16
DDX55-212ENST00000544738 ASMTLO95671 621 aa16.06■□□□□ 0.16
DDX55-212ENST00000544738 PRKAR1AP10644 381 aa16.06■□□□□ 0.16
DDX55-212ENST00000544738 NR2C2P49116 596 aa16.06■□□□□ 0.16
DDX55-212ENST00000544738 SPINT3P49223 89 aa16.06■□□□□ 0.16
DDX55-212ENST00000544738 MLLT10P55197 1068 aa16.06■□□□□ 0.16
DDX55-212ENST00000544738 MAZP56270 477 aaKnown RBP16.06■□□□□ 0.16
DDX55-212ENST00000544738 ZBTB17Q13105 803 aa16.06■□□□□ 0.16
DDX55-212ENST00000544738 TBX2Q13207 712 aaPredicted RBP16.06■□□□□ 0.16
DDX55-212ENST00000544738 TFDP2Q14188 446 aa16.06■□□□□ 0.16
DDX55-212ENST00000544738 MAP9Q49MG5 647 aa16.06■□□□□ 0.16
DDX55-212ENST00000544738 NT5DC3Q86UY8 548 aa16.06■□□□□ 0.16
DDX55-212ENST00000544738 SLITRK4Q8IW52 837 aa16.06■□□□□ 0.16
DDX55-212ENST00000544738 NAGSQ8N159 534 aa16.06■□□□□ 0.16
DDX55-212ENST00000544738 IMP4Q96G21 291 aaKnown RBP16.06■□□□□ 0.16
DDX55-212ENST00000544738 OLFM3Q96PB7 478 aa16.06■□□□□ 0.16
DDX55-212ENST00000544738 AGAP2Q99490 1192 aa16.06■□□□□ 0.16
DDX55-212ENST00000544738 SLC25A51Q9H1U9 297 aa16.06■□□□□ 0.16
DDX55-212ENST00000544738 RDH14Q9HBH5 336 aa16.06■□□□□ 0.16
DDX55-212ENST00000544738 ZNF891A8MT65 544 aaPredicted RBP16.05■□□□□ 0.16
DDX55-212ENST00000544738 COMTP21964 271 aa16.05■□□□□ 0.16
DDX55-212ENST00000544738 CD97P48960 835 aa16.05■□□□□ 0.16
DDX55-212ENST00000544738 HADHBP55084 474 aaKnown RBP16.05■□□□□ 0.16
DDX55-212ENST00000544738 OR1D5P58170 312 aa16.05■□□□□ 0.16
DDX55-212ENST00000544738 SLC14A2Q15849 920 aa16.05■□□□□ 0.16
DDX55-212ENST00000544738 AMZ1Q400G9 498 aa16.05■□□□□ 0.16
DDX55-212ENST00000544738 HENMT1Q5T8I9 393 aaKnown RBP16.05■□□□□ 0.16
DDX55-212ENST00000544738 FHL5Q5TD97 284 aa16.05■□□□□ 0.16
DDX55-212ENST00000544738 CCDC70Q6NSX1 233 aa16.05■□□□□ 0.16
DDX55-212ENST00000544738 SARM1Q6SZW1 724 aa16.05■□□□□ 0.16
DDX55-212ENST00000544738 MARK2Q7KZI7 788 aaKnown RBP16.05■□□□□ 0.16
DDX55-212ENST00000544738 TRIM74Q86UV6 250 aa16.05■□□□□ 0.16
DDX55-212ENST00000544738 CACNA2D3Q8IZS8 1091 aa16.05■□□□□ 0.16
DDX55-212ENST00000544738 RCBTB1Q8NDN9 531 aa16.05■□□□□ 0.16
DDX55-212ENST00000544738 AGAP3Q96P47 875 aa16.05■□□□□ 0.16
DDX55-212ENST00000544738 TAAR9Q96RI9 348 aa16.05■□□□□ 0.16
DDX55-212ENST00000544738 SRPK1Q96SB4 655 aaKnown RBP16.05■□□□□ 0.16
DDX55-212ENST00000544738 DPYSL5Q9BPU6 564 aa16.05■□□□□ 0.16
DDX55-212ENST00000544738 TRIM5Q9C035 493 aa16.05■□□□□ 0.16
DDX55-212ENST00000544738 B3GNT4Q9C0J1 378 aa16.05■□□□□ 0.16
DDX55-212ENST00000544738 RMI1Q9H9A7 625 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms