RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 ZNF750Q32MQ0 723 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 HTR3DQ70Z44 454 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 MED25Q71SY5 747 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 RRAGAQ7L523 313 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 DOK3Q7L591 496 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 RAB11FIP2Q7L804 512 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 LIMS2Q7Z4I7 341 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 KCTD20Q7Z5Y7 419 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 GPBP1Q86WP2 473 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 TMEM25Q86YD3 366 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 ADGRF2Q8IZF7 708 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 NUP93Q8N1F7 819 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 FBXO15Q8NCQ5 510 aaPredicted RBP6.29□□□□□ -1.4
CPSF7-222ENST00000544585 KNL1Q8NG31 2342 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 CPT1CQ8TCG5 803 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 SNRNP27Q8WVK2 155 aaKnown RBP6.29□□□□□ -1.4
CPSF7-222ENST00000544585 GOLGA1Q92805 767 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 WBP1Q96G27 269 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 ANKRD36BP1Q96IX9 119 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 FIZ1Q96SL8 496 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 GPR174Q9BXC1 333 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 BRD8Q9H0E9 1235 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 PCED1AQ9H1Q7 454 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 CD248Q9HCU0 757 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 ZDHHC4Q9NPG8 344 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 MRPS18AQ9NVS2 196 aaKnown RBP6.29□□□□□ -1.4
CPSF7-222ENST00000544585 CHORDC1Q9UHD1 332 aaPredicted RBP6.29□□□□□ -1.4
CPSF7-222ENST00000544585 POLG2Q9UHN1 485 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 CLCA2Q9UQC9 943 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 CDYLQ9Y232 598 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 PTPRDP23468 1912 aa6.29□□□□□ -1.4
CPSF7-222ENST00000544585 PTPN13Q12923 2485 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 TEP1Q99973 2627 aaKnown RBP6.28□□□□□ -1.4
CPSF7-222ENST00000544585 VWA3AA6NCI4 1184 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 CYSRT1A8MQ03 144 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 F8VP50 259 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 H0Y3Z8 333 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 TBCAO75347 108 aaKnown RBP6.28□□□□□ -1.4
CPSF7-222ENST00000544585 C1QL1O75973 258 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 PRB1P04280 392 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 ANXA6P08133 673 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 TMEM191BP0C7N4 346 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 ACADMP11310 421 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 WARSP23381 471 aaKnown RBP6.28□□□□□ -1.4
CPSF7-222ENST00000544585 MGAT1P26572 445 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 HNF1BP35680 557 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 CFHR1Q03591 330 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 GPS1Q13098 491 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 PRKG2Q13237 762 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 RPS6KA2Q15349 733 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 TMEM119Q4V9L6 283 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 FAM111BQ6SJ93 734 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 BRSK2Q8IWQ3 736 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 CFAP52Q8N1V2 620 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 ZNF843Q8N446 348 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 CXorf38Q8TB03 319 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 UCMAQ8WVF2 138 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 WDR60Q8WVS4 1066 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 MYLPFQ96A32 169 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 C3orf49Q96BT1 292 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 SIPA1Q96FS4 1042 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 PCED1BQ96HM7 432 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 HPDLQ96IR7 371 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 ACCSQ96QU6 501 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 TRIB1Q96RU8 372 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 MMS19Q96T76 1030 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 ACOX2Q99424 681 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 CPPED1Q9BRF8 314 aaPredicted RBP6.28□□□□□ -1.4
CPSF7-222ENST00000544585 FAM213AQ9BRX8 229 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 BBS2Q9BXC9 721 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 SNX25Q9H3E2 840 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 PREBQ9HCU5 417 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 OLA1Q9NTK5 396 aaKnown RBP6.28□□□□□ -1.4
CPSF7-222ENST00000544585 DNAJC17Q9NVM6 304 aaKnown RBP6.28□□□□□ -1.4
CPSF7-222ENST00000544585 CLIC5Q9NZA1 410 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 PCDHGA1Q9Y5H4 931 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 RAD54BQ9Y620 910 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 ADAMTS9Q9P2N4 1935 aa6.28□□□□□ -1.4
CPSF7-222ENST00000544585 HELZ2Q9BYK8 2649 aaKnown RBP6.28□□□□□ -1.4
CPSF7-222ENST00000544585 SH3D21A4FU49 640 aa6.27□□□□□ -1.41
CPSF7-222ENST00000544585 WASH3PC4AMC7 463 aa6.27□□□□□ -1.41
CPSF7-222ENST00000544585 COCHO43405 550 aa6.27□□□□□ -1.41
CPSF7-222ENST00000544585 CACNG3O60359 315 aa6.27□□□□□ -1.41
CPSF7-222ENST00000544585 SYNCRIPO60506 623 aaKnown RBP6.27□□□□□ -1.41
CPSF7-222ENST00000544585 TACC1O75410 805 aa6.27□□□□□ -1.41
CPSF7-222ENST00000544585 IGLV3-19P01714 112 aa6.27□□□□□ -1.41
CPSF7-222ENST00000544585 TNNC2P02585 160 aa6.27□□□□□ -1.41
CPSF7-222ENST00000544585 CISD3P0C7P0 127 aa6.27□□□□□ -1.41
CPSF7-222ENST00000544585 CHRM3P20309 590 aa6.27□□□□□ -1.41
CPSF7-222ENST00000544585 ACO1P21399 889 aaKnown RBP6.27□□□□□ -1.41
CPSF7-222ENST00000544585 ITPKBP27987 946 aa6.27□□□□□ -1.41
CPSF7-222ENST00000544585 CSNK1EP49674 416 aaKnown RBP6.27□□□□□ -1.41
CPSF7-222ENST00000544585 TPMTP51580 245 aa6.27□□□□□ -1.41
CPSF7-222ENST00000544585 AFF3P51826 1226 aaKnown RBP6.27□□□□□ -1.41
CPSF7-222ENST00000544585 PRKAG1P54619 331 aa6.27□□□□□ -1.41
CPSF7-222ENST00000544585 NR1H2P55055 460 aa6.27□□□□□ -1.41
CPSF7-222ENST00000544585 RAC3P60763 192 aa6.27□□□□□ -1.41
CPSF7-222ENST00000544585 GOLGA8FQ08AF8 430 aa6.27□□□□□ -1.41
CPSF7-222ENST00000544585 ZNF844Q08AG5 666 aa6.27□□□□□ -1.41
CPSF7-222ENST00000544585 GOLGA8DPQ0D2H9 430 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms