RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 CLCNKAP51800 687 aa19.72■□□□□ 0.75
LPCAT3-211ENST00000543794 UBE2IP63279 158 aaKnown RBP19.72■□□□□ 0.75
LPCAT3-211ENST00000543794 MYL5Q02045 173 aa19.72■□□□□ 0.75
LPCAT3-211ENST00000543794 FOXM1Q08050 763 aa19.72■□□□□ 0.75
LPCAT3-211ENST00000543794 SPTAN1Q13813 2472 aaKnown RBP19.72■□□□□ 0.75
LPCAT3-211ENST00000543794 ERV3-1Q14264 604 aa19.72■□□□□ 0.75
LPCAT3-211ENST00000543794 HENMT1Q5T8I9 393 aaKnown RBP19.72■□□□□ 0.75
LPCAT3-211ENST00000543794 RBM43Q6ZSC3 357 aaKnown RBP19.72■□□□□ 0.75
LPCAT3-211ENST00000543794 ZNF571Q7Z3V5 609 aaPredicted RBP19.72■□□□□ 0.75
LPCAT3-211ENST00000543794 ZNF653Q96CK0 615 aa19.72■□□□□ 0.75
LPCAT3-211ENST00000543794 TDRD1Q9BXT4 1180 aaKnown RBP19.72■□□□□ 0.75
LPCAT3-211ENST00000543794 CARD9Q9H257 536 aa19.72■□□□□ 0.75
LPCAT3-211ENST00000543794 PCDH18Q9HCL0 1135 aa19.72■□□□□ 0.75
LPCAT3-211ENST00000543794 PRDM8Q9NQV8 689 aa19.72■□□□□ 0.75
LPCAT3-211ENST00000543794 OGFRQ9NZT2 677 aa19.72■□□□□ 0.75
LPCAT3-211ENST00000543794 FADS2P1A8MWK0 482 aa19.71■□□□□ 0.75
LPCAT3-211ENST00000543794 DDX3XO00571 662 aaKnown RBP eCLIP19.71■□□□□ 0.751e-14■■■■■ 90.7
LPCAT3-211ENST00000543794 TOX3O15405 576 aaPredicted RBP19.71■□□□□ 0.75
LPCAT3-211ENST00000543794 GRID2O43424 1007 aa19.71■□□□□ 0.75
LPCAT3-211ENST00000543794 IL4RP24394 825 aa19.71■□□□□ 0.75
LPCAT3-211ENST00000543794 SPINT3P49223 89 aa19.71■□□□□ 0.75
LPCAT3-211ENST00000543794 GFERP55789 205 aa19.71■□□□□ 0.75
LPCAT3-211ENST00000543794 RPL26P61254 145 aaKnown RBP19.71■□□□□ 0.75
LPCAT3-211ENST00000543794 DSC2Q02487 901 aa19.71■□□□□ 0.75
LPCAT3-211ENST00000543794 IL11RAQ14626 422 aa19.71■□□□□ 0.75
LPCAT3-211ENST00000543794 TXNRD3NBQ6F5E7 133 aa19.71■□□□□ 0.75
LPCAT3-211ENST00000543794 ASB18Q6ZVZ8 466 aa19.71■□□□□ 0.75
LPCAT3-211ENST00000543794 GALNT6Q8NCL4 622 aa19.71■□□□□ 0.75
LPCAT3-211ENST00000543794 TEKT4Q8WW24 435 aa19.71■□□□□ 0.75
LPCAT3-211ENST00000543794 MAML1Q92585 1016 aa19.71■□□□□ 0.75
LPCAT3-211ENST00000543794 PLEKHG4BQ96PX9 1271 aa19.71■□□□□ 0.75
LPCAT3-211ENST00000543794 HSD3B7Q9H2F3 369 aa19.71■□□□□ 0.75
LPCAT3-211ENST00000543794 FAM83DQ9H4H8 585 aa19.71■□□□□ 0.75
LPCAT3-211ENST00000543794 MYO1AQ9UBC5 1043 aa19.71■□□□□ 0.75
LPCAT3-211ENST00000543794 RPL26L1Q9UNX3 145 aaKnown RBP19.71■□□□□ 0.75
LPCAT3-211ENST00000543794 POLHQ9Y253 713 aa19.71■□□□□ 0.75
LPCAT3-211ENST00000543794 RGSL1A5PLK6 1076 aa19.7■□□□□ 0.74
LPCAT3-211ENST00000543794 LRRC53A6NM62 1247 aa19.7■□□□□ 0.74
LPCAT3-211ENST00000543794 RECKO95980 971 aa19.7■□□□□ 0.74
LPCAT3-211ENST00000543794 KRT7P08729 469 aa19.7■□□□□ 0.74
LPCAT3-211ENST00000543794 MYBL1P10243 752 aa19.7■□□□□ 0.74
LPCAT3-211ENST00000543794 XRCC1P18887 633 aaPredicted RBP19.7■□□□□ 0.74
LPCAT3-211ENST00000543794 GARSP41250 739 aaKnown RBP19.7■□□□□ 0.74
LPCAT3-211ENST00000543794 TMEM26Q6ZUK4 368 aa19.7■□□□□ 0.74
LPCAT3-211ENST00000543794 PHYKPLQ8IUZ5 450 aa19.7■□□□□ 0.74
LPCAT3-211ENST00000543794 AOPEPQ8N6M6 819 aa19.7■□□□□ 0.74
LPCAT3-211ENST00000543794 ARRDC2Q8TBH0 407 aa19.7■□□□□ 0.74
LPCAT3-211ENST00000543794 RBM22Q9NW64 420 aaKnown RBP eCLIP19.7■□□□□ 0.74
LPCAT3-211ENST00000543794 AIPL1Q9NZN9 384 aa19.7■□□□□ 0.74
LPCAT3-211ENST00000543794 ATXN10Q9UBB4 475 aa19.7■□□□□ 0.74
LPCAT3-211ENST00000543794 AMACRQ9UHK6 382 aa19.7■□□□□ 0.74
LPCAT3-211ENST00000543794 KCND3Q9UK17 655 aa19.7■□□□□ 0.74
LPCAT3-211ENST00000543794 TLK1Q9UKI8 766 aa19.7■□□□□ 0.74
LPCAT3-211ENST00000543794 ADGRG1Q9Y653 693 aa19.7■□□□□ 0.74
LPCAT3-211ENST00000543794 SLC30A1Q9Y6M5 507 aa19.7■□□□□ 0.74
LPCAT3-211ENST00000543794 SPTBN1Q01082 2364 aaKnown RBP19.7■□□□□ 0.74
LPCAT3-211ENST00000543794 GOLGA6L3A6NEY3 463 aa19.69■□□□□ 0.74
LPCAT3-211ENST00000543794 MATN3O15232 486 aa19.69■□□□□ 0.74
LPCAT3-211ENST00000543794 RFPL1O75677 317 aa19.69■□□□□ 0.74
LPCAT3-211ENST00000543794 UBXN7O94888 489 aa19.69■□□□□ 0.74
LPCAT3-211ENST00000543794 PRKCIP41743 596 aa19.69■□□□□ 0.74
LPCAT3-211ENST00000543794 SH3BP2P78314 561 aa19.69■□□□□ 0.74
LPCAT3-211ENST00000543794 PIGHQ14442 188 aaPredicted RBP19.69■□□□□ 0.74
LPCAT3-211ENST00000543794 ASIC2Q16515 512 aa19.69■□□□□ 0.74
LPCAT3-211ENST00000543794 ANKRD20A8PQ5CZ79 823 aa19.69■□□□□ 0.74
LPCAT3-211ENST00000543794 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.69■□□□□ 0.74
LPCAT3-211ENST00000543794 FATE1Q969F0 183 aa19.69■□□□□ 0.74
LPCAT3-211ENST00000543794 RNF31Q96EP0 1072 aa19.69■□□□□ 0.74
LPCAT3-211ENST00000543794 TRIM11Q96F44 468 aa19.69■□□□□ 0.74
LPCAT3-211ENST00000543794 OR6C1Q96RD1 312 aa19.69■□□□□ 0.74
LPCAT3-211ENST00000543794 ISCUQ9H1K1 167 aa19.69■□□□□ 0.74
LPCAT3-211ENST00000543794 ZNF768Q9H5H4 540 aaKnown RBP19.69■□□□□ 0.74
LPCAT3-211ENST00000543794 PCDH9Q9HC56 1237 aa19.69■□□□□ 0.74
LPCAT3-211ENST00000543794 ANO10Q9NW15 660 aa19.69■□□□□ 0.74
LPCAT3-211ENST00000543794 SCHIP1Q9P0W5 487 aaPredicted RBP19.69■□□□□ 0.74
LPCAT3-211ENST00000543794 RCOR3Q9P2K3 495 aaPredicted RBP19.69■□□□□ 0.74
LPCAT3-211ENST00000543794 PCDHGA6Q9Y5G7 932 aa19.69■□□□□ 0.74
LPCAT3-211ENST00000543794 ICE1Q9Y2F5 2266 aa19.68■□□□□ 0.74
LPCAT3-211ENST00000543794 C1orf232A0A0U1RR37 186 aa19.68■□□□□ 0.74
LPCAT3-211ENST00000543794 KATNA1O75449 491 aa19.68■□□□□ 0.74
LPCAT3-211ENST00000543794 KIAA0754O94854 1291 aa19.68■□□□□ 0.74
LPCAT3-211ENST00000543794 NDUFA10O95299 355 aa19.68■□□□□ 0.74
LPCAT3-211ENST00000543794 ZNF8P17098 575 aaPredicted RBP19.68■□□□□ 0.74
LPCAT3-211ENST00000543794 TYRP1P17643 537 aa19.68■□□□□ 0.74
LPCAT3-211ENST00000543794 CA4P22748 312 aa19.68■□□□□ 0.74
LPCAT3-211ENST00000543794 SLC19A1P41440 591 aa19.68■□□□□ 0.74
LPCAT3-211ENST00000543794 SEPHS1P49903 392 aa19.68■□□□□ 0.74
LPCAT3-211ENST00000543794 ZNF165P49910 485 aa19.68■□□□□ 0.74
LPCAT3-211ENST00000543794 PMS2P54278 862 aa19.68■□□□□ 0.74
LPCAT3-211ENST00000543794 SLC25A11Q02978 314 aaKnown RBP19.68■□□□□ 0.74
LPCAT3-211ENST00000543794 NIPAL4Q0D2K0 466 aa19.68■□□□□ 0.74
LPCAT3-211ENST00000543794 GALNT2Q10471 571 aa19.68■□□□□ 0.74
LPCAT3-211ENST00000543794 TIGD7Q6NT04 549 aaPredicted RBP19.68■□□□□ 0.74
LPCAT3-211ENST00000543794 TMEM135Q86UB9 458 aa19.68■□□□□ 0.74
LPCAT3-211ENST00000543794 LPCAT1Q8NF37 534 aa19.68■□□□□ 0.74
LPCAT3-211ENST00000543794 FAM71BQ8TC56 605 aa19.68■□□□□ 0.74
LPCAT3-211ENST00000543794 CCHCR1Q8TD31 782 aa19.68■□□□□ 0.74
LPCAT3-211ENST00000543794 STAMBPL1Q96FJ0 436 aa19.68■□□□□ 0.74
LPCAT3-211ENST00000543794 TGM7Q96PF1 710 aa19.68■□□□□ 0.74
LPCAT3-211ENST00000543794 KLC4Q9NSK0 619 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms