RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 CACUL1Q86Y37 369 aa11.45□□□□□ -0.58
COPS7A-217ENST00000543537 CACNA2D3Q8IZS8 1091 aa11.45□□□□□ -0.58
COPS7A-217ENST00000543537 STK40Q8N2I9 435 aa11.45□□□□□ -0.58
COPS7A-217ENST00000543537 ANKRD42Q8N9B4 389 aa11.45□□□□□ -0.58
COPS7A-217ENST00000543537 DEFB124Q8NES8 71 aa11.45□□□□□ -0.58
COPS7A-217ENST00000543537 OR52K2Q8NGK3 314 aa11.45□□□□□ -0.58
COPS7A-217ENST00000543537 CCDC126Q96EE4 140 aa11.45□□□□□ -0.58
COPS7A-217ENST00000543537 ZNF317Q96PQ6 595 aaPredicted RBP11.45□□□□□ -0.58
COPS7A-217ENST00000543537 GPR22Q99680 433 aa11.45□□□□□ -0.58
COPS7A-217ENST00000543537 GTPBP2Q9BX10 602 aaKnown RBP11.45□□□□□ -0.58
COPS7A-217ENST00000543537 TDRD1Q9BXT4 1180 aaKnown RBP11.45□□□□□ -0.58
COPS7A-217ENST00000543537 PITPNM3Q9BZ71 974 aa11.45□□□□□ -0.58
COPS7A-217ENST00000543537 CDH19Q9H159 772 aa11.45□□□□□ -0.58
COPS7A-217ENST00000543537 KDM4CQ9H3R0 1056 aa11.45□□□□□ -0.58
COPS7A-217ENST00000543537 MTG2Q9H4K7 406 aa11.45□□□□□ -0.58
COPS7A-217ENST00000543537 POPDC3Q9HBV1 291 aa11.45□□□□□ -0.58
COPS7A-217ENST00000543537 FBXL12Q9NXK8 326 aa11.45□□□□□ -0.58
COPS7A-217ENST00000543537 CTNNAL1Q9UBT7 734 aa11.45□□□□□ -0.58
COPS7A-217ENST00000543537 SERGEFQ9UGK8 458 aa11.45□□□□□ -0.58
COPS7A-217ENST00000543537 VPS51Q9UID3 782 aa11.45□□□□□ -0.58
COPS7A-217ENST00000543537 NCKAP1Q9Y2A7 1128 aa11.45□□□□□ -0.58
COPS7A-217ENST00000543537 RAI2Q9Y5P3 530 aa11.45□□□□□ -0.58
COPS7A-217ENST00000543537 KMT2BQ9UMN6 2715 aaPredicted RBP11.45□□□□□ -0.58
COPS7A-217ENST00000543537 ASPMQ8IZT6 3477 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 USP24Q9UPU5 2620 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 A0A087X1B8 175 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 FAM221BA6H8Z2 402 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 H7C0S8 307 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 MID1O15344 667 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 CBFA2T3O75081 653 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 RFPL1O75677 317 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 TRIM16O95361 564 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 CER1O95813 267 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 ATXN1LP0C7T5 689 aaKnown RBP11.44□□□□□ -0.58
COPS7A-217ENST00000543537 DHRS4L1P0CG22 281 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 TROVE2P10155 538 aaKnown RBP eCLIP11.44□□□□□ -0.58
COPS7A-217ENST00000543537 ERVK-10P10266 1014 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 TPH1P17752 444 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 CD9P21926 228 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 SLC8A1P32418 973 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 RPA3P35244 121 aaPredicted RBP11.44□□□□□ -0.58
COPS7A-217ENST00000543537 MAGEA12P43365 314 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 ARCN1P48444 511 aaKnown RBP11.44□□□□□ -0.58
COPS7A-217ENST00000543537 STK19P49842 368 aaPredicted RBP11.44□□□□□ -0.58
COPS7A-217ENST00000543537 CCR5P51681 352 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 NEK3P51956 506 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 EPHB1P54762 984 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 RACK1P63244 317 aaKnown RBP11.44□□□□□ -0.58
COPS7A-217ENST00000543537 ARF5P84085 180 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 DMTNQ08495 405 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 CNGA3Q16281 694 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 PCSK7Q16549 785 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 MROH9Q5TGP6 573 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 KIAA0895LQ68EN5 471 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 KLC3Q6P597 504 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 LVRNQ6Q4G3 990 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 AFTPHQ6ULP2 937 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 FAM124AQ86V42 546 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 MMAAQ8IVH4 418 aaKnown RBP11.44□□□□□ -0.58
COPS7A-217ENST00000543537 PGBD5Q8N414 524 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 AADATQ8N5Z0 425 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 NETO2Q8NC67 525 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 C2CD4AQ8NCU7 369 aaPredicted RBP11.44□□□□□ -0.58
COPS7A-217ENST00000543537 OR2AP1Q8NGE2 309 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 OR2T34Q8NGX1 318 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 MDM1Q8TC05 714 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 TCP10LQ8TDR4 215 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 MRRFQ96E11 262 aaKnown RBP11.44□□□□□ -0.58
COPS7A-217ENST00000543537 MFSD3Q96ES6 412 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 RPL10LQ96L21 214 aaKnown RBP11.44□□□□□ -0.58
COPS7A-217ENST00000543537 FCRL3Q96P31 734 aaPredicted RBP11.44□□□□□ -0.58
COPS7A-217ENST00000543537 TRIB3Q96RU7 358 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 OSBPL1AQ9BXW6 950 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 MANSC1Q9H8J5 431 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 PLAC1Q9HBJ0 212 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 NOD2Q9HC29 1040 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 TM9SF3Q9HD45 589 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 NLE1Q9NVX2 485 aaPredicted RBP11.44□□□□□ -0.58
COPS7A-217ENST00000543537 APPL1Q9UKG1 709 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 FBXO5Q9UKT4 447 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 PHTF1Q9UMS5 762 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 PKP3Q9Y446 797 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 ADAMTS9Q9P2N4 1935 aa11.44□□□□□ -0.58
COPS7A-217ENST00000543537 DOCK4Q8N1I0 1966 aa11.43□□□□□ -0.58
COPS7A-217ENST00000543537 A0A1W2PP55 124 aa11.43□□□□□ -0.58
COPS7A-217ENST00000543537 A0A1W2PPC4 97 aa11.43□□□□□ -0.58
COPS7A-217ENST00000543537 A0A1W2PPM1 405 aa11.43□□□□□ -0.58
COPS7A-217ENST00000543537 LRRC72A6NJI9 287 aa11.43□□□□□ -0.58
COPS7A-217ENST00000543537 CXorf49A8MYA2 514 aaPredicted RBP11.43□□□□□ -0.58
COPS7A-217ENST00000543537 LATO43561 262 aa11.43□□□□□ -0.58
COPS7A-217ENST00000543537 KIAA0754O94854 1291 aa11.43□□□□□ -0.58
COPS7A-217ENST00000543537 STMN1P16949 149 aa11.43□□□□□ -0.58
COPS7A-217ENST00000543537 KCNA4P22459 653 aa11.43□□□□□ -0.58
COPS7A-217ENST00000543537 NMBRP28336 390 aa11.43□□□□□ -0.58
COPS7A-217ENST00000543537 DRD3P35462 400 aa11.43□□□□□ -0.58
COPS7A-217ENST00000543537 SKIV2L2P42285 1042 aaKnown RBP11.43□□□□□ -0.58
COPS7A-217ENST00000543537 TTPAP49638 278 aa11.43□□□□□ -0.58
COPS7A-217ENST00000543537 HK2P52789 917 aa11.43□□□□□ -0.58
COPS7A-217ENST00000543537 MAXP61244 160 aa11.43□□□□□ -0.58
COPS7A-217ENST00000543537 CRADDP78560 199 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms