RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-215	ENST00000542133	KIAA1143	Q96AT1	154 aa	Predicted RBP	7.72	□□□□□ -1.17
NPIPB4-215	ENST00000542133	MIEF2	Q96C03	454 aa		7.72	□□□□□ -1.17
NPIPB4-215	ENST00000542133	HAPLN3	Q96S86	360 aa		7.72	□□□□□ -1.17
NPIPB4-215	ENST00000542133	BARD1	Q99728	777 aa	Known RBP	7.72	□□□□□ -1.17
NPIPB4-215	ENST00000542133	PRMT1	Q99873	361 aa	Known RBP	7.72	□□□□□ -1.17
NPIPB4-215	ENST00000542133	INTS10	Q9NVR2	710 aa	Known RBP	7.72	□□□□□ -1.17
NPIPB4-215	ENST00000542133	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	7.72	□□□□□ -1.17
NPIPB4-215	ENST00000542133	NSMCE4A	Q9NXX6	385 aa		7.72	□□□□□ -1.17
NPIPB4-215	ENST00000542133	HESX1	Q9UBX0	185 aa		7.72	□□□□□ -1.17
NPIPB4-215	ENST00000542133	PILRA	Q9UKJ1	303 aa		7.72	□□□□□ -1.17
NPIPB4-215	ENST00000542133	KCTD3	Q9Y597	815 aa		7.72	□□□□□ -1.17
NPIPB4-215	ENST00000542133	KCNMB2	Q9Y691	235 aa		7.72	□□□□□ -1.17
NPIPB4-215	ENST00000542133	ABCA2	Q9BZC7	2435 aa		7.72	□□□□□ -1.17
NPIPB4-215	ENST00000542133	IGHV5-10-1	A0A0J9YXX1	117 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	TCP11X1	B4DZS4	312 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	PDLIM1	O00151	329 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133		O00370	1275 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	SMAD6	O43541	496 aa	Known RBP	7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	SNAP91	O60641	907 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	KCNJ13	O60928	360 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	SORBS2	O94875	1100 aa	Known RBP	7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	TPM1	P09493	284 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	TRIM49	P0CI25	452 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	TRIM49C	P0CI26	452 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	CTSE	P14091	401 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	NOS3	P29474	1203 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	EIF4A3	P38919	411 aa	Known RBP	7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	NR2C2	P49116	596 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	RGS7	P49802	495 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	COPB1	P53618	953 aa	Known RBP	7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	CLNS1A	P54105	237 aa	Known RBP	7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	SLC12A2	P55011	1212 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	CD83	Q01151	205 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	MC1R	Q01726	317 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	NAA30	Q147X3	362 aa	Predicted RBP	7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	QPCT	Q16769	361 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	BBS9	Q3SYG4	887 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	C14orf28	Q4W4Y0	310 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	RABGAP1L	Q5R372	815 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	LIN54	Q6MZP7	749 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	C16orf46	Q6P387	395 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	DPY19L3	Q6ZPD9	716 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	UNC13D	Q70J99	1090 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	TIPARP	Q7Z3E1	657 aa	Known RBP	7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	KDELC2	Q7Z4H8	507 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	VPS36	Q86VN1	386 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	HID1	Q8IV36	788 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	UNC5B	Q8IZJ1	945 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	NLGN4X	Q8N0W4	816 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	SLC34A3	Q8N130	599 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	CCDC150	Q8NCX0	1101 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	CCDC112	Q8NEF3	446 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	TRPC4AP	Q8TEL6	797 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	ZNF483	Q8TF39	744 aa	Predicted RBP	7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	THAP3	Q8WTV1	239 aa	Predicted RBP	7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	TSACC	Q96A04	125 aa	Predicted RBP	7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	BTN2A3P	Q96KV6	586 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	MRGPRX2	Q96LB1	330 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	CCDC74B	Q96LY2	380 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	TCF12	Q99081	682 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	PSMB7	Q99436	277 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	NUDT22	Q9BRQ3	303 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	EFHD1	Q9BUP0	239 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	SLC39A2	Q9NP94	309 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	SIRT5	Q9NXA8	310 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	LRIT1	Q9P2V4	623 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	GPR52	Q9Y2T5	361 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	ZNF711	Q9Y462	761 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	SPG11	Q96JI7	2443 aa		7.71	□□□□□ -1.18
NPIPB4-215	ENST00000542133	KCNU1	A8MYU2	1149 aa		7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	UBXN8	O00124	270 aa		7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	PMM2	O15305	246 aa		7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	HNRNPR	O43390	633 aa	Known RBP	7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	NDUFB5	O43674	189 aa		7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	NUDT21	O43809	227 aa	Known RBP	7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	IGLV3-25	P01717	112 aa		7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	NR3C1	P04150	777 aa		7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	CD19	P15391	556 aa		7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	TCN2	P20062	427 aa		7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	GNA15	P30679	374 aa		7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	L1CAM	P32004	1257 aa		7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	SOX6	P35712	828 aa		7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	HNF4A	P41235	474 aa		7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	VAMP7	P51809	220 aa		7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	B4GALNT1	Q00973	533 aa		7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	GBE1	Q04446	702 aa		7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	ITK	Q08881	620 aa		7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	DMPK	Q09013	629 aa		7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	TRAP1	Q12931	704 aa	Known RBP	7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	ARHGEF7	Q14155	803 aa		7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	STK11	Q15831	433 aa		7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	ATP13A4	Q4VNC1	1196 aa		7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	PRR30	Q53SZ7	412 aa	Predicted RBP	7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	ANKS6	Q68DC2	871 aa		7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	KCTD16	Q68DU8	428 aa		7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	FBXL22	Q6P050	247 aa		7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	PMF1	Q6P1K2	205 aa		7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	OGFOD3	Q6PK18	319 aa		7.7	□□□□□ -1.18
NPIPB4-215	ENST00000542133	MICALCL	Q6ZW33	695 aa		7.7	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms