RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 OR2AG1Q9H205 316 aa9.64□□□□□ -0.87
YBX3-212ENST00000542002 TRIM39Q9HCM9 518 aa9.64□□□□□ -0.87
YBX3-212ENST00000542002 TAAR2Q9P1P5 351 aa9.64□□□□□ -0.87
YBX3-212ENST00000542002 SLC23A2Q9UGH3 650 aa9.64□□□□□ -0.87
YBX3-212ENST00000542002 ZNHIT2Q9UHR6 403 aa9.64□□□□□ -0.87
YBX3-212ENST00000542002 PADI4Q9UM07 663 aa9.64□□□□□ -0.87
YBX3-212ENST00000542002 FREM2Q5SZK8 3169 aa9.64□□□□□ -0.87
YBX3-212ENST00000542002 LAMA5O15230 3695 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 TRBV23OR9-2A0A075B6M9 112 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 CHUKO15111 745 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 NUAK1O60285 661 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 ECEL1O95672 775 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 LPOP22079 712 aaPredicted RBP9.63□□□□□ -0.87
YBX3-212ENST00000542002 CDKN1CP49918 316 aaPredicted RBP9.63□□□□□ -0.87
YBX3-212ENST00000542002 TMPRSS15P98073 1019 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 TARDBPQ13148 414 aaKnown RBP eCLIP9.63□□□□□ -0.87
YBX3-212ENST00000542002 PEX6Q13608 980 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 HLTFQ14527 1009 aaKnown RBP eCLIP9.63□□□□□ -0.87
YBX3-212ENST00000542002 HS1BP3Q53T59 392 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 CERCAMQ5T4B2 595 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 HES3Q5TGS1 186 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 CDCP2Q5VXM1 449 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 CHST15Q7LFX5 561 aaPredicted RBP9.63□□□□□ -0.87
YBX3-212ENST00000542002 TMPRSS12Q86WS5 348 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 ZNF547Q8IVP9 402 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 OR52K1Q8NGK4 314 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 OR13C4Q8NGS5 318 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 DTX3LQ8TDB6 740 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 SCG3Q8WXD2 468 aaKnown RBP9.63□□□□□ -0.87
YBX3-212ENST00000542002 PBKQ96KB5 322 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 OR2M4Q96R27 311 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 OSBPL9Q96SU4 736 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 AP1M1Q9BXS5 423 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 CDH19Q9H159 772 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 DPEP2Q9H4A9 486 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 FAM96AQ9H5X1 160 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 HACD3Q9P035 362 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 VPS18Q9P253 973 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 TTC7AQ9ULT0 858 aaPredicted RBP9.63□□□□□ -0.87
YBX3-212ENST00000542002 DOLKQ9UPQ8 538 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 RNF215Q9Y6U7 377 aa9.63□□□□□ -0.87
YBX3-212ENST00000542002 TDRD6O60522 2096 aaKnown RBP9.63□□□□□ -0.87
YBX3-212ENST00000542002 GLYATL1P3A0A0U1RQE8 302 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 TCRBV7S3A2A0A539 114 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 MROH6A6NGR9 719 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 C2orf81A6NN90 581 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 B4DGG1 531 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 TAF4O00268 1085 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 STX7O15400 261 aaKnown RBP9.62□□□□□ -0.87
YBX3-212ENST00000542002 GRID2O43424 1007 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 ZNF189O75820 626 aaPredicted RBP9.62□□□□□ -0.87
YBX3-212ENST00000542002 SUN1O94901 812 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 MT-CO3P00414 261 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 GP1BAP07359 652 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 PRSS56P0CW18 603 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 JUPP14923 745 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 SPAM1P38567 509 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 DUSP3P51452 185 aaPredicted RBP9.62□□□□□ -0.87
YBX3-212ENST00000542002 ZNF140P52738 457 aaPredicted RBP9.62□□□□□ -0.87
YBX3-212ENST00000542002 MAZP56270 477 aaKnown RBP9.62□□□□□ -0.87
YBX3-212ENST00000542002 E2F1Q01094 437 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 TMEM115Q12893 351 aaPredicted RBP9.62□□□□□ -0.87
YBX3-212ENST00000542002 SEMA5AQ13591 1074 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 POU6F1Q14863 301 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 TRIP13Q15645 432 aaPredicted RBP9.62□□□□□ -0.87
YBX3-212ENST00000542002 CCDC38Q502W7 563 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 PDPK2PQ6A1A2 396 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 C11orf96Q7Z7L8 435 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 GALNT13Q8IUC8 556 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 NAGSQ8N159 534 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 C17orf53Q8N3J3 647 aaPredicted RBP9.62□□□□□ -0.87
YBX3-212ENST00000542002 ARL14Q8N4G2 192 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 DCBLD1Q8N8Z6 715 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 RASGEF1AQ8N9B8 481 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 ZNF398Q8TD17 642 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 ZDHHC1Q8WTX9 485 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 ANP32BQ92688 251 aaKnown RBP9.62□□□□□ -0.87
YBX3-212ENST00000542002 CCDC74AQ96AQ1 378 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 DNAJC1Q96KC8 554 aaKnown RBP9.62□□□□□ -0.87
YBX3-212ENST00000542002 VPS35Q96QK1 796 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 CCDC3Q9BQI4 270 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 GSDMCQ9BYG8 508 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 LRRC40Q9H9A6 602 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 RAB6BQ9NRW1 208 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 RAD18Q9NS91 495 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.62□□□□□ -0.87
YBX3-212ENST00000542002 NCKIPSDQ9NZQ3 722 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 TBC1D29Q9UFV1 150 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 FKBPLQ9UIM3 349 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 SNX12Q9UMY4 172 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 KCNK6Q9Y257 313 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 ZKSCAN5Q9Y2L8 839 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 NEU2Q9Y3R4 380 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 PKP3Q9Y446 797 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 LRP4O75096 1905 aa9.62□□□□□ -0.87
YBX3-212ENST00000542002 A0A1W2PNU3 283 aaPredicted RBP9.61□□□□□ -0.87
YBX3-212ENST00000542002 A0A1W2PQM1 296 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 CCDC78A2IDD5 438 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 A6NCN8 305 aa9.61□□□□□ -0.87
YBX3-212ENST00000542002 TRABD2BA6NFA1 517 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms