RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 TRAPPC12Q8WVT3 735 aa14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 C2orf49Q9BVC5 232 aaPredicted RBP14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 AAASQ9NRG9 546 aa14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 NFKBIL1Q9UBC1 381 aaPredicted RBP14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 PRELID1Q9Y255 219 aa14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 FAM47E-STBD1D6RA91 191 aa14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 FAM189A1O60320 539 aa14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 BNIP3Q12983 259 aa14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 CPSF6Q16630 551 aaKnown RBP eCLIP14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 PPP1R26Q5T8A7 1209 aaPredicted RBP14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 DCLRE1AQ6PJP8 1040 aa14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 PAOXQ6QHF9 649 aa14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 PLPPR4Q7Z2D5 763 aa14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 LAPTM4BQ86VI4 370 aa14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 TOP6BLQ8N6T0 577 aa14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 SLC35B2Q8TB61 432 aa14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 ELMO1Q92556 727 aa14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 HSPBAP1Q96EW2 488 aa14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 KCTD15Q96SI1 283 aaPredicted RBP14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 TPK1Q9H3S4 243 aa14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 ANKRA2Q9H9E1 313 aa14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 TCAF1Q9Y4C2 921 aa14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 SPATA31A5Q5VU36 1347 aa14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 SPATA31A7Q8IWB4 1347 aa14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 CILPO75339 1184 aa14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 CLPXO76031 633 aa14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 SNHG28P0DPA3 235 aa14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 FAM43BQ6ZT52 329 aaPredicted RBP14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 RELL1Q8IUW5 271 aa14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 HAVCR1Q96D42 359 aa14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 ERMAPQ96PL5 475 aaPredicted RBP14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 COPS4Q9BT78 406 aa14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 PAK6Q9NQU5 681 aaPredicted RBP14.88□□□□□ -0.03
SMARCA4-207ENST00000541122 UNGP13051 313 aaPredicted RBP14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 NR4A1P22736 598 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 SLC18A2Q05940 514 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 HSPA14Q0VDF9 509 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 SEMA5AQ13591 1074 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 WSCD1Q658N2 575 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 ZNF655Q8N720 491 aaPredicted RBP14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 CSGALNACT1Q8TDX6 532 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 PPCDCQ96CD2 204 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 YDJCA8MPS7 323 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 ZW10O43264 779 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 BUD23O43709 281 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 PRLP01236 227 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 CSH1P0DML2 217 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 CSH2P0DML3 217 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 MAGEA8P43361 318 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 SUZ12Q15022 739 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 KCNA10Q16322 511 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 IL23RQ5VWK5 629 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 TAPT1Q6NXT6 567 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 UROC1Q96N76 676 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 MTRRQ9UBK8 725 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 UXTQ9UBK9 157 aaPredicted RBP14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 SMIM22K7EJ46 135 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 PABPC4LP0CB38 370 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 PKMP14618 531 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 ITGB5P18084 799 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 DNAJB1P25685 340 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 GRM5P41594 1212 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 CDH4P55283 916 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 DCAF12L1Q5VU92 463 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 TMEM214Q6NUQ4 689 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 DEF8Q6ZN54 512 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 FSTL5Q8N475 847 aaPredicted RBP14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 BSNDQ8WZ55 320 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 LRRC3Q9BY71 257 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 CHRAC1Q9NRG0 131 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 KIF13AQ9H1H9 1805 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 CXCR6O00574 342 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 CCNYL3P0C7X3 344 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 RORCP51449 518 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 FBXO43Q4G163 708 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 AKIRIN2Q53H80 203 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 FAM156AQ8NDB6 213 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 C12orf43Q96C57 262 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 SLC9A7Q96T83 725 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 FEM1AQ9BSK4 669 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 C1QTNF1Q9BXJ1 281 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 GMIPQ9P107 970 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 GULP1Q9UBP9 304 aa14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 ZNF490Q9ULM2 529 aaPredicted RBP14.87□□□□□ -0.03
SMARCA4-207ENST00000541122 FAM234BA2RU67 622 aa14.86□□□□□ -0.03
SMARCA4-207ENST00000541122 NPEPPSL1A6NEC2 478 aa14.86□□□□□ -0.03
SMARCA4-207ENST00000541122 NOTOA8MTQ0 251 aa14.86□□□□□ -0.03
SMARCA4-207ENST00000541122 IFNGP01579 166 aa14.86□□□□□ -0.03
SMARCA4-207ENST00000541122 XRCC1P18887 633 aaPredicted RBP14.86□□□□□ -0.03
SMARCA4-207ENST00000541122 CCNCP24863 283 aa14.86□□□□□ -0.03
SMARCA4-207ENST00000541122 KLRC2P26717 231 aa14.86□□□□□ -0.03
SMARCA4-207ENST00000541122 PLD1Q13393 1074 aa14.86□□□□□ -0.03
SMARCA4-207ENST00000541122 SLC9B1Q4ZJI4 515 aa14.86□□□□□ -0.03
SMARCA4-207ENST00000541122 IQSEC1Q6DN90 963 aa14.86□□□□□ -0.03
SMARCA4-207ENST00000541122 MPP5Q8N3R9 675 aa14.86□□□□□ -0.03
SMARCA4-207ENST00000541122 PJA1Q8NG27 643 aa14.86□□□□□ -0.03
SMARCA4-207ENST00000541122 LRRN4Q8WUT4 740 aa14.86□□□□□ -0.03
SMARCA4-207ENST00000541122 CRELD1Q96HD1 420 aa14.86□□□□□ -0.03
SMARCA4-207ENST00000541122 KCNN2Q9H2S1 579 aa14.86□□□□□ -0.03
SMARCA4-207ENST00000541122 ABCB9Q9NP78 766 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms