RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 FOPNLQ96NB1 174 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 LGMNQ99538 433 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 TUBA1CQ9BQE3 449 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 CINPQ9BW66 212 aaPredicted RBP5.21□□□□□ -1.58
PROM1-220ENST00000540805 TRIT1Q9H3H1 467 aaKnown RBP5.21□□□□□ -1.58
PROM1-220ENST00000540805 CATSPERBQ9H7T0 1116 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 VRTNQ9H8Y1 702 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 PRDM8Q9NQV8 689 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 CREBZFQ9NS37 354 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 CCDC167Q9P0B6 97 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 CD300AQ9UGN4 299 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 UGT2A1Q9Y4X1 527 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 TRIM64BA6NI03 449 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 LACTBL1A8MY62 500 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 TMEM233B4DJY2 109 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 UBDO15205 165 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 TRIM16O95361 564 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 SNRPB2P08579 225 aaKnown RBP5.21□□□□□ -1.58
PROM1-220ENST00000540805 ACRP10323 421 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 ENPP1P22413 925 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 S100A1P23297 94 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 FASP25445 335 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 PTPN9P43378 593 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 SLC7A2P52569 658 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 RHOAP61586 193 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 MPP1Q00013 466 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 CAP1Q01518 475 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 SLC6A3Q01959 620 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 GRSF1Q12849 480 aaKnown RBP eCLIP5.21□□□□□ -1.58
PROM1-220ENST00000540805 SLC13A2Q13183 592 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 ACAP2Q15057 778 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 WSCD1Q658N2 575 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 FAM45BPQ6NSW5 357 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 SLC27A1Q6PCB7 646 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 SLC44A2Q8IWA5 706 aaPredicted RBP5.21□□□□□ -1.58
PROM1-220ENST00000540805 PELI3Q8N2H9 469 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 DHRSXQ8N5I4 330 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 ATP6V0D2Q8N8Y2 350 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 KDM1BQ8NB78 822 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 FAM45AQ8TCE6 357 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 KCTD4Q8WVF5 259 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 ELMO1Q92556 727 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 HTRA1Q92743 480 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 NRBF2Q96F24 287 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 FBXL20Q96IG2 436 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 CNDP2Q96KP4 475 aaKnown RBP5.21□□□□□ -1.58
PROM1-220ENST00000540805 SENP8Q96LD8 212 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 SLC39A3Q9BRY0 314 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 SLC25A23Q9BV35 468 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 NFKBIZQ9BYH8 718 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 ADAMTS10Q9H324 1103 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 RUBCNLQ9H714 662 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 CYP3A43Q9HB55 503 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 NT5MQ9NPB1 228 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 IARS2Q9NSE4 1012 aaKnown RBP5.21□□□□□ -1.58
PROM1-220ENST00000540805 RIC8BQ9NVN3 520 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 WBP1LQ9NX94 342 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 FLRT1Q9NZU1 646 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 TMEM181Q9P2C4 612 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 SIX4Q9UIU6 781 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 RUVBL2Q9Y230 463 aaKnown RBP5.21□□□□□ -1.58
PROM1-220ENST00000540805 MFHAS1Q9Y4C4 1052 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 PCDHGA11Q9Y5H2 935 aa5.21□□□□□ -1.58
PROM1-220ENST00000540805 DHRS12A0PJE2 317 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 NCF1BA6NI72 391 aaPredicted RBP5.2□□□□□ -1.58
PROM1-220ENST00000540805 NCF1CA8MVU1 366 aaPredicted RBP5.2□□□□□ -1.58
PROM1-220ENST00000540805 H7C4K7 107 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 DLGAP1O14490 977 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 PHGDHO43175 533 aaKnown RBP5.2□□□□□ -1.58
PROM1-220ENST00000540805 MFSD11O43934 449 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 NPHS1O60500 1241 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 MGEA5O60502 916 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 TPST1O60507 370 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 CLPXO76031 633 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 MT-CO1P00395 513 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 RHOCP08134 193 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 ACADMP11310 421 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 NCF1P14598 390 aaPredicted RBP5.2□□□□□ -1.58
PROM1-220ENST00000540805 HDCP19113 662 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 CYP3A5P20815 502 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 CXCR2P25025 360 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 PSMA4P25789 261 aaKnown RBP5.2□□□□□ -1.58
PROM1-220ENST00000540805 CAPGP40121 348 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 ACADSBP45954 432 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 TMBIM6P55061 237 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 TNK2Q07912 1038 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 GRB14Q14449 540 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 GRM3Q14832 879 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 STARD3Q14849 445 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 CCDC85BQ15834 202 aaPredicted RBP5.2□□□□□ -1.58
PROM1-220ENST00000540805 ATP6AP1Q15904 470 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 LCLAT1Q6UWP7 414 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 CCDC81Q6ZN84 652 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 RRM2BQ7LG56 351 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 NECAB2Q7Z6G3 386 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 C7orf61Q8IZ16 206 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 C1orf127Q8N9H9 656 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 GOLM1Q8NBJ4 401 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 PCYOX1LQ8NBM8 494 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 NETO2Q8NC67 525 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms