RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 C6P13671 934 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 GNSP15586 552 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 LHCGRP22888 699 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 MAOBP27338 520 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 MAT2AP31153 395 aaKnown RBP10.55□□□□□ -0.72
ATL3-204ENST00000540699 HNF1BP35680 557 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 LIG3P49916 1009 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 GYS2P54840 703 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 RACK1P63244 317 aaKnown RBP10.55□□□□□ -0.72
ATL3-204ENST00000540699 ACVR1Q04771 509 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 CNGA3Q16281 694 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 CDKN3Q16667 212 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 ESRP1Q6NXG1 681 aaKnown RBP10.55□□□□□ -0.72
ATL3-204ENST00000540699 LIPIQ6XZB0 460 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 IQCHQ86VS3 1027 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 CNTN4Q8IWV2 1026 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 CTAGE3PQ8IX95 158 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 RGL4Q8IZJ4 473 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 LPCAT1Q8NF37 534 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 OR13J1Q8NGT2 312 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 CXorf40AQ8TE69 158 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 CDKL2Q92772 493 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 PEX13Q92968 403 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 CENPTQ96BT3 561 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 COQ10AQ96MF6 247 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 SMIM14Q96QK8 99 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 MCMBPQ9BTE3 642 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 ADGRE3Q9BY15 652 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 SMOC1Q9H4F8 434 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 IL1RAPL1Q9NZN1 696 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 SLC17A6Q9P2U8 582 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 SLC2A6Q9UGQ3 507 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 TBK1Q9UHD2 729 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 SPO11Q9Y5K1 396 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 HS3ST3A1Q9Y663 406 aa10.55□□□□□ -0.72
ATL3-204ENST00000540699 ATXN2Q99700 1313 aaKnown RBP10.55□□□□□ -0.72
ATL3-204ENST00000540699 HMX2A2RU54 273 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 FOXO6A8MYZ6 492 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 WNT9AO14904 365 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 VILLO15195 856 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 RAD51BO15315 384 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 TM7SF2O76062 418 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 PAK4O96013 591 aaPredicted RBP10.54□□□□□ -0.72
ATL3-204ENST00000540699 INHBAP08476 426 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 ALPIP09923 528 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 ELFN1P0C7U0 828 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 ERVK-10P10266 1014 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 CREB1P16220 341 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 ZNF30P17039 623 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 CTPS1P17812 591 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 HNRNPA2B1P22626 353 aaKnown RBP10.54□□□□□ -0.72
ATL3-204ENST00000540699 SERPINB9P50453 376 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 AFF3P51826 1226 aaKnown RBP10.54□□□□□ -0.72
ATL3-204ENST00000540699 STC1P52823 247 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 EPHB1P54762 984 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 PPP2R2AP63151 447 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 CBX1P83916 185 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 SEMG2Q02383 582 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 OVGP1Q12889 678 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 LAMB3Q13751 1172 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 SEPT6Q14141 434 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 TEDDM1Q5T9Z0 273 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 STPG1Q5TH74 334 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 PDPK2PQ6A1A2 396 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 CRTC1Q6UUV9 634 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 PACS1Q6VY07 963 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 GCNT7Q6ZNI0 430 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 SH2D5Q6ZV89 423 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 NLRP9Q7RTR0 991 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 ABI3BPQ7Z7G0 1075 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 TSPAN33Q86UF1 283 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 KCNMB4Q86W47 210 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 PAF1Q8N7H5 531 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 MFSD2AQ8NA29 543 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 TP53I13Q8NBR0 393 aaPredicted RBP10.54□□□□□ -0.72
ATL3-204ENST00000540699 FAM174AQ8TBP5 190 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 BRSK1Q8TDC3 778 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 SNX19Q92543 992 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 MRRFQ96E11 262 aaKnown RBP10.54□□□□□ -0.72
ATL3-204ENST00000540699 SERAC1Q96JX3 654 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 SLC6A18Q96N87 628 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 SRPK1Q96SB4 655 aaKnown RBP10.54□□□□□ -0.72
ATL3-204ENST00000540699 WRAP53Q9BUR4 548 aaKnown RBP10.54□□□□□ -0.72
ATL3-204ENST00000540699 MIR1-1HGQ9H1L0 117 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 MAGEE1Q9HCI5 957 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 GPR27Q9NS67 375 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 KCTD5Q9NXV2 234 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.54□□□□□ -0.72
ATL3-204ENST00000540699 SENP1Q9P0U3 644 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 SLC6A14Q9UN76 642 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 PSAT1Q9Y617 370 aa10.54□□□□□ -0.72
ATL3-204ENST00000540699 TDRD6O60522 2096 aaKnown RBP10.54□□□□□ -0.72
ATL3-204ENST00000540699 ARID1BQ8NFD5 2236 aaPredicted RBP10.53□□□□□ -0.72
ATL3-204ENST00000540699 IQANK1A0A1B0GTG1 560 aa10.53□□□□□ -0.72
ATL3-204ENST00000540699 A0A1W2PPM1 405 aa10.53□□□□□ -0.72
ATL3-204ENST00000540699 CCDC78A2IDD5 438 aa10.53□□□□□ -0.72
ATL3-204ENST00000540699 PATE3B3GLJ2 98 aa10.53□□□□□ -0.72
ATL3-204ENST00000540699 KHNYNO15037 678 aaKnown RBP10.53□□□□□ -0.72
ATL3-204ENST00000540699 SLC31A1O15431 190 aa10.53□□□□□ -0.72
ATL3-204ENST00000540699 RRP9O43818 475 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms