RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 SNX1Q13596 522 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 PRPSAP1Q14558 356 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 KCTD19Q17RG1 926 aaPredicted RBP14.92□□□□□ -0.02
UBE3B-212ENST00000540230 CERCAMQ5T4B2 595 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 ARHGEF18Q6ZSZ5 1173 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 CHST15Q7LFX5 561 aaPredicted RBP14.92□□□□□ -0.02
UBE3B-212ENST00000540230 ADGRG6Q86SQ4 1221 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 C17orf82Q86X59 251 aaPredicted RBP14.92□□□□□ -0.02
UBE3B-212ENST00000540230 CACTIN-AS1Q8N1I8 211 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 PDCD7Q8N8D1 485 aaKnown RBP14.92□□□□□ -0.02
UBE3B-212ENST00000540230 TRIM58Q8NG06 486 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 TBL1YQ9BQ87 522 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 OR2AG1Q9H205 316 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 SYNDIG1Q9H7V2 258 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 RAD18Q9NS91 495 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 HACD3Q9P035 362 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 ZNHIT2Q9UHR6 403 aa14.92□□□□□ -0.02
UBE3B-212ENST00000540230 APC2O95996 2303 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 KIF26BQ2KJY2 2108 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 CFAP47Q6ZTR5 3102 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 TMEM8BA6NDV4 472 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 NTN3O00634 580 aaPredicted RBP14.91□□□□□ -0.02
UBE3B-212ENST00000540230 NUAK1O60285 661 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 UGT1A9O60656 530 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 CSO75390 466 aaKnown RBP14.91□□□□□ -0.02
UBE3B-212ENST00000540230 ECEL1O95672 775 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 ACP5P13686 325 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 UGT1A6P19224 532 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 UGT1A1P22309 533 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 UGT1A4P22310 534 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 CXCR5P32302 372 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 UGT1A3P35503 534 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 UGT1A5P35504 534 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 SPAM1P38567 509 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 CCL7P80098 99 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 CHRNA6Q15825 494 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 PARP6Q2NL67 630 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 PDPK2PQ6A1A2 396 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 FAM151BQ6UXP7 276 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 PHYKPLQ8IUZ5 450 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 GLIS1Q8NBF1 620 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 RTP4Q96DX8 246 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 CCDC86Q9H6F5 360 aaKnown RBP14.91□□□□□ -0.02
UBE3B-212ENST00000540230 UGT1A7Q9HAW7 530 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 UGT1A10Q9HAW8 530 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 UGT1A8Q9HAW9 530 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 TRIM39Q9HCM9 518 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 PIH1D1Q9NWS0 290 aaKnown RBP14.91□□□□□ -0.02
UBE3B-212ENST00000540230 KCNK6Q9Y257 313 aa14.91□□□□□ -0.02
UBE3B-212ENST00000540230 CACNA1BQ00975 2339 aa14.9□□□□□ -0.02
UBE3B-212ENST00000540230 UNC13CQ8NB66 2214 aa14.9□□□□□ -0.02
UBE3B-212ENST00000540230 A0A1W2PNU3 283 aaPredicted RBP14.9□□□□□ -0.02
UBE3B-212ENST00000540230 GRID2O43424 1007 aa14.9□□□□□ -0.02
UBE3B-212ENST00000540230 NRDCO43847 1150 aa14.9□□□□□ -0.02
UBE3B-212ENST00000540230 ETS1P14921 441 aa14.9□□□□□ -0.02
UBE3B-212ENST00000540230 GLB1P16278 677 aa14.9□□□□□ -0.02
UBE3B-212ENST00000540230 ISXQ2M1V0 245 aa14.9□□□□□ -0.02
UBE3B-212ENST00000540230 PLA2G4EQ3MJ16 856 aa14.9□□□□□ -0.02
UBE3B-212ENST00000540230 CRTC3Q6UUV7 619 aa14.9□□□□□ -0.02
UBE3B-212ENST00000540230 PROSER1Q86XN7 944 aa14.9□□□□□ -0.02
UBE3B-212ENST00000540230 REXO1L1PQ8IX06 675 aa14.9□□□□□ -0.02
UBE3B-212ENST00000540230 ARL14Q8N4G2 192 aa14.9□□□□□ -0.02
UBE3B-212ENST00000540230 Q8N9G6 341 aaPredicted RBP14.9□□□□□ -0.02
UBE3B-212ENST00000540230 OR13C4Q8NGS5 318 aa14.9□□□□□ -0.02
UBE3B-212ENST00000540230 UBE2Q2Q8WVN8 375 aa14.9□□□□□ -0.02
UBE3B-212ENST00000540230 DEPDC7Q96QD5 511 aa14.9□□□□□ -0.02
UBE3B-212ENST00000540230 VPS35Q96QK1 796 aa14.9□□□□□ -0.02
UBE3B-212ENST00000540230 LRIT1Q9P2V4 623 aa14.9□□□□□ -0.02
UBE3B-212ENST00000540230 SLC23A2Q9UGH3 650 aa14.9□□□□□ -0.02
UBE3B-212ENST00000540230 TRBV23OR9-2A0A075B6M9 112 aa14.89□□□□□ -0.03
UBE3B-212ENST00000540230 GLYATL1P3A0A0U1RQE8 302 aa14.89□□□□□ -0.03
UBE3B-212ENST00000540230 PMS2P1A4D2B8 440 aa14.89□□□□□ -0.03
UBE3B-212ENST00000540230 CHUKO15111 745 aa14.89□□□□□ -0.03
UBE3B-212ENST00000540230 IFNB1P01574 187 aa14.89□□□□□ -0.03
UBE3B-212ENST00000540230 RPLP0P05388 317 aaKnown RBP14.89□□□□□ -0.03
UBE3B-212ENST00000540230 TAF1AQ15573 450 aaPredicted RBP14.89□□□□□ -0.03
UBE3B-212ENST00000540230 SPRED1Q7Z699 444 aa14.89□□□□□ -0.03
UBE3B-212ENST00000540230 B3GNT8Q7Z7M8 397 aa14.89□□□□□ -0.03
UBE3B-212ENST00000540230 ZNF547Q8IVP9 402 aa14.89□□□□□ -0.03
UBE3B-212ENST00000540230 OR4K2Q8NGD2 314 aa14.89□□□□□ -0.03
UBE3B-212ENST00000540230 ARNT2Q9HBZ2 717 aa14.89□□□□□ -0.03
UBE3B-212ENST00000540230 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.89□□□□□ -0.03
UBE3B-212ENST00000540230 TBC1D29Q9UFV1 150 aa14.89□□□□□ -0.03
UBE3B-212ENST00000540230 FKBPLQ9UIM3 349 aa14.89□□□□□ -0.03
UBE3B-212ENST00000540230 APPL1Q9UKG1 709 aa14.89□□□□□ -0.03
UBE3B-212ENST00000540230 ATXN7L1Q9ULK2 861 aaPredicted RBP14.89□□□□□ -0.03
UBE3B-212ENST00000540230 ZNF148Q9UQR1 794 aa14.89□□□□□ -0.03
UBE3B-212ENST00000540230 PKP3Q9Y446 797 aa14.89□□□□□ -0.03
UBE3B-212ENST00000540230 ENTPD2Q9Y5L3 495 aa14.89□□□□□ -0.03
UBE3B-212ENST00000540230 ACACAQ13085 2346 aa14.89□□□□□ -0.03
UBE3B-212ENST00000540230 SRRM3A6NNA2 597 aaPredicted RBP14.88□□□□□ -0.03
UBE3B-212ENST00000540230 CCL22O00626 93 aa14.88□□□□□ -0.03
UBE3B-212ENST00000540230 PPM1DO15297 605 aa14.88□□□□□ -0.03
UBE3B-212ENST00000540230 STX7O15400 261 aaKnown RBP14.88□□□□□ -0.03
UBE3B-212ENST00000540230 NUDT21O43809 227 aaKnown RBP14.88□□□□□ -0.03
UBE3B-212ENST00000540230 ZNF189O75820 626 aaPredicted RBP14.88□□□□□ -0.03
UBE3B-212ENST00000540230 AP2A1O95782 977 aa14.88□□□□□ -0.03
UBE3B-212ENST00000540230 FGGP02679 453 aa14.88□□□□□ -0.03
UBE3B-212ENST00000540230 ZSCAN5DPP0CG00 497 aa14.88□□□□□ -0.03
UBE3B-212ENST00000540230 TPH1P17752 444 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms